RNA–Protein interactions for RNA: ENST00000473854.5

CCDC39-203, Transcript of coiled-coil domain containing 39, humanhuman

TSL 2

Gene CCDC39, Length 487 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-203ENST00000473854 ZNF652Q9Y2D9 606 aa3.9□□□□□ -1.79
CCDC39-203ENST00000473854 SLC12A7Q9Y666 1083 aa3.9□□□□□ -1.79
CCDC39-203ENST00000473854 CBFA2T2O43439 604 aa3.89□□□□□ -1.79
CCDC39-203ENST00000473854 GUCY2CP25092 1073 aa3.89□□□□□ -1.79
CCDC39-203ENST00000473854 GTF2A2P52657 109 aa3.89□□□□□ -1.79
CCDC39-203ENST00000473854 HEATR6Q6AI08 1181 aaKnown RBP3.89□□□□□ -1.79
CCDC39-203ENST00000473854 IGFL4Q6B9Z1 124 aa3.89□□□□□ -1.79
CCDC39-203ENST00000473854 LDLRAD3Q86YD5 345 aa3.89□□□□□ -1.79
CCDC39-203ENST00000473854 C1orf210Q8IVY1 113 aa3.89□□□□□ -1.79
CCDC39-203ENST00000473854 CRACR2BQ8N4Y2 399 aaPredicted RBP3.89□□□□□ -1.79
CCDC39-203ENST00000473854 ADCY4Q8NFM4 1077 aa3.89□□□□□ -1.79
CCDC39-203ENST00000473854 RCC1LQ96I51 464 aaKnown RBP3.89□□□□□ -1.79
CCDC39-203ENST00000473854 FERD3LQ96RJ6 166 aa3.89□□□□□ -1.79
CCDC39-203ENST00000473854 AURKAIP1Q9NWT8 199 aaPredicted RBP3.89□□□□□ -1.79
CCDC39-203ENST00000473854 ADAMTS1Q9UHI8 967 aa3.89□□□□□ -1.79
CCDC39-203ENST00000473854 VAMP4O75379 141 aa3.88□□□□□ -1.79
CCDC39-203ENST00000473854 FBLP22087 321 aaKnown RBP3.88□□□□□ -1.79
CCDC39-203ENST00000473854 ZC3H6P61129 1189 aaKnown RBP3.88□□□□□ -1.79
CCDC39-203ENST00000473854 TUBA3CQ13748 450 aa3.88□□□□□ -1.79
CCDC39-203ENST00000473854 IQCEQ6IPM2 695 aa3.88□□□□□ -1.79
CCDC39-203ENST00000473854 TUBA3EQ6PEY2 450 aa3.88□□□□□ -1.79
CCDC39-203ENST00000473854 UNC5AQ6ZN44 842 aa3.88□□□□□ -1.79
CCDC39-203ENST00000473854 Q6ZUG5 572 aa3.88□□□□□ -1.79
CCDC39-203ENST00000473854 POLNQ7Z5Q5 900 aa3.88□□□□□ -1.79
CCDC39-203ENST00000473854 ADAT2Q7Z6V5 191 aaKnown RBP3.88□□□□□ -1.79
CCDC39-203ENST00000473854 REXO1L1PQ8IX06 675 aa3.88□□□□□ -1.79
CCDC39-203ENST00000473854 ZNF483Q8TF39 744 aaPredicted RBP3.88□□□□□ -1.79
CCDC39-203ENST00000473854 EXTL1Q92935 676 aa3.88□□□□□ -1.79
CCDC39-203ENST00000473854 GNRHR2Q96P88 292 aa3.88□□□□□ -1.79
CCDC39-203ENST00000473854 LRRC37BQ96QE4 947 aa3.88□□□□□ -1.79
CCDC39-203ENST00000473854 FAM86C1Q9NVL1 165 aa3.88□□□□□ -1.79
CCDC39-203ENST00000473854 CGGBP1Q9UFW8 167 aaPredicted RBP3.88□□□□□ -1.79
CCDC39-203ENST00000473854 COA3Q9Y2R0 106 aaPredicted RBP3.88□□□□□ -1.79
CCDC39-203ENST00000473854 RAMP2O60895 175 aa3.87□□□□□ -1.79
CCDC39-203ENST00000473854 RAD17O75943 681 aa3.87□□□□□ -1.79
CCDC39-203ENST00000473854 RPL11P62913 178 aaKnown RBP3.87□□□□□ -1.79
CCDC39-203ENST00000473854 AGBL4Q5VU57 503 aa3.87□□□□□ -1.79
CCDC39-203ENST00000473854 POMZP3Q6PJE2 187 aa3.87□□□□□ -1.79
CCDC39-203ENST00000473854 TEPPQ6URK8 271 aa3.87□□□□□ -1.79
CCDC39-203ENST00000473854 TEX2Q8IWB9 1127 aa3.87□□□□□ -1.79
CCDC39-203ENST00000473854 Q8N1Y9 231 aa3.87□□□□□ -1.79
CCDC39-203ENST00000473854 ARHGEF39Q8N4T4 335 aa3.87□□□□□ -1.79
CCDC39-203ENST00000473854 RBBP8NLQ8NC74 664 aaPredicted RBP3.87□□□□□ -1.79
CCDC39-203ENST00000473854 PLEKHG4BQ96PX9 1271 aa3.87□□□□□ -1.79
CCDC39-203ENST00000473854 KLHL25Q9H0H3 589 aa3.87□□□□□ -1.79
CCDC39-203ENST00000473854 MSL2Q9HCI7 577 aa3.87□□□□□ -1.79
CCDC39-203ENST00000473854 TMEFF2Q9UIK5 374 aaPredicted RBP3.87□□□□□ -1.79
CCDC39-203ENST00000473854 GGT7Q9UJ14 662 aa3.87□□□□□ -1.79
CCDC39-203ENST00000473854 HGSO14964 777 aaPredicted RBP3.86□□□□□ -1.79
CCDC39-203ENST00000473854 U2SURPO15042 1029 aaKnown RBP3.86□□□□□ -1.79
CCDC39-203ENST00000473854 MYO1BO43795 1136 aa3.86□□□□□ -1.79
CCDC39-203ENST00000473854 ACO1P21399 889 aaKnown RBP3.86□□□□□ -1.79
CCDC39-203ENST00000473854 ACRV1P26436 265 aa3.86□□□□□ -1.79
CCDC39-203ENST00000473854 DNAJA1P31689 397 aaKnown RBP3.86□□□□□ -1.79
CCDC39-203ENST00000473854 TAX1BP1Q86VP1 789 aa3.86□□□□□ -1.79
CCDC39-203ENST00000473854 KIAA0825Q8IV33 1275 aa3.86□□□□□ -1.79
CCDC39-203ENST00000473854 CACTINQ8WUQ7 758 aaKnown RBP3.86□□□□□ -1.79
CCDC39-203ENST00000473854 DPF3Q92784 378 aa3.86□□□□□ -1.79
CCDC39-203ENST00000473854 TRMT2BQ96GJ1 504 aaKnown RBP3.86□□□□□ -1.79
CCDC39-203ENST00000473854 AJUBAQ96IF1 538 aa3.86□□□□□ -1.79
CCDC39-203ENST00000473854 BCL11AQ9H165 835 aa3.86□□□□□ -1.79
CCDC39-203ENST00000473854 PHAXQ9H814 394 aaKnown RBP3.86□□□□□ -1.79
CCDC39-203ENST00000473854 BTG4Q9NY30 223 aa3.86□□□□□ -1.79
CCDC39-203ENST00000473854 HSPBP1Q9NZL4 362 aa3.86□□□□□ -1.79
CCDC39-203ENST00000473854 CLEC1BQ9P126 229 aa3.86□□□□□ -1.79
CCDC39-203ENST00000473854 PCDHB4Q9Y5E5 795 aa3.86□□□□□ -1.79
CCDC39-203ENST00000473854 DMRT1Q9Y5R6 373 aa3.86□□□□□ -1.79
CCDC39-203ENST00000473854 SLC30A1Q9Y6M5 507 aa3.86□□□□□ -1.79
CCDC39-203ENST00000473854 X6R8D5 127 aa3.86□□□□□ -1.79
CCDC39-203ENST00000473854 MAFKO60675 156 aa3.85□□□□□ -1.79
CCDC39-203ENST00000473854 PLS3P13797 630 aa3.85□□□□□ -1.79
CCDC39-203ENST00000473854 RAC3P60763 192 aa3.85□□□□□ -1.79
CCDC39-203ENST00000473854 SMAD2Q15796 467 aaKnown RBP3.85□□□□□ -1.79
CCDC39-203ENST00000473854 GNPTABQ3T906 1256 aa3.85□□□□□ -1.79
CCDC39-203ENST00000473854 PHOSPHO1Q8TCT1 267 aa3.85□□□□□ -1.79
CCDC39-203ENST00000473854 COPS5Q92905 334 aa3.85□□□□□ -1.79
CCDC39-203ENST00000473854 NEIL1Q96FI4 390 aaPredicted RBP3.85□□□□□ -1.79
CCDC39-203ENST00000473854 AGAP2Q99490 1192 aa3.85□□□□□ -1.79
CCDC39-203ENST00000473854 SUGT1Q9Y2Z0 365 aa3.85□□□□□ -1.79
CCDC39-203ENST00000473854 TIMM13Q9Y5L4 95 aaPredicted RBP3.85□□□□□ -1.79
CCDC39-203ENST00000473854 KLHL18O94889 574 aa3.84□□□□□ -1.79
CCDC39-203ENST00000473854 FBXO21O94952 628 aa3.84□□□□□ -1.79
CCDC39-203ENST00000473854 DGCR2P98153 550 aa3.84□□□□□ -1.79
CCDC39-203ENST00000473854 USP10Q14694 798 aaKnown RBP3.84□□□□□ -1.79
CCDC39-203ENST00000473854 ZYXQ15942 572 aaKnown RBP3.84□□□□□ -1.79
CCDC39-203ENST00000473854 CCDC142Q17RM4 750 aa3.84□□□□□ -1.79
CCDC39-203ENST00000473854 E4F1Q66K89 784 aaPredicted RBP3.84□□□□□ -1.79
CCDC39-203ENST00000473854 FUKQ8N0W3 1084 aa3.84□□□□□ -1.79
CCDC39-203ENST00000473854 NUDT10Q8NFP7 164 aa3.84□□□□□ -1.79
CCDC39-203ENST00000473854 NUDT11Q96G61 164 aa3.84□□□□□ -1.79
CCDC39-203ENST00000473854 TMEM169Q96HH4 297 aa3.84□□□□□ -1.79
CCDC39-203ENST00000473854 ARID3AQ99856 593 aa3.84□□□□□ -1.79
CCDC39-203ENST00000473854 SPON2Q9BUD6 331 aa3.84□□□□□ -1.79
CCDC39-203ENST00000473854 TCRBV5S2A0A599 114 aa3.83□□□□□ -1.8
CCDC39-203ENST00000473854 TMEM191CA6NGB0 347 aa3.83□□□□□ -1.8
CCDC39-203ENST00000473854 EPHX1P07099 455 aa3.83□□□□□ -1.8
CCDC39-203ENST00000473854 C1SP09871 688 aa3.83□□□□□ -1.8
CCDC39-203ENST00000473854 NAT2P11245 290 aa3.83□□□□□ -1.8
CCDC39-203ENST00000473854 COL6A1P12109 1028 aa3.83□□□□□ -1.8
CCDC39-203ENST00000473854 FPR2P25090 351 aa3.83□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms