RNA–Protein interactions for RNA: ENST00000473684.5

TMEM39A-206, Transcript of transmembrane protein 39A, humanhuman

TSL 5

Gene TMEM39A, Length 3,043 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-206ENST00000473684 IRAK1P51617 712 aa5.74□□□□□ -1.49
TMEM39A-206ENST00000473684 PPFIA1Q13136 1202 aa5.74□□□□□ -1.49
TMEM39A-206ENST00000473684 CUL3Q13618 768 aa5.74□□□□□ -1.49
TMEM39A-206ENST00000473684 TTC22Q5TAA0 569 aa5.74□□□□□ -1.49
TMEM39A-206ENST00000473684 VN1R5Q7Z5H4 357 aa5.74□□□□□ -1.49
TMEM39A-206ENST00000473684 GALNT15Q8N3T1 639 aa5.74□□□□□ -1.49
TMEM39A-206ENST00000473684 HDAC7Q8WUI4 952 aa5.74□□□□□ -1.49
TMEM39A-206ENST00000473684 TEKT1Q969V4 418 aa5.74□□□□□ -1.49
TMEM39A-206ENST00000473684 SPAG5Q96R06 1193 aa5.74□□□□□ -1.49
TMEM39A-206ENST00000473684 GORASP1Q9BQQ3 440 aa5.74□□□□□ -1.49
TMEM39A-206ENST00000473684 ADAM19Q9H013 955 aa5.74□□□□□ -1.49
TMEM39A-206ENST00000473684 GINM1Q9NU53 330 aa5.74□□□□□ -1.49
TMEM39A-206ENST00000473684 G3BP2Q9UN86 482 aaKnown RBP5.74□□□□□ -1.49
TMEM39A-206ENST00000473684 NPHP3Q7Z494 1330 aa5.74□□□□□ -1.49
TMEM39A-206ENST00000473684 FMN2Q9NZ56 1722 aa5.74□□□□□ -1.49
TMEM39A-206ENST00000473684 LRP6O75581 1613 aa5.74□□□□□ -1.49
TMEM39A-206ENST00000473684 PLCH1Q4KWH8 1693 aa5.74□□□□□ -1.49
TMEM39A-206ENST00000473684 EIF3HO15372 352 aaKnown RBP eCLIP5.74□□□□□ -1.49
TMEM39A-206ENST00000473684 RNF8O76064 485 aa5.74□□□□□ -1.49
TMEM39A-206ENST00000473684 STK10O94804 968 aaKnown RBP5.74□□□□□ -1.49
TMEM39A-206ENST00000473684 ARAFP10398 606 aa5.74□□□□□ -1.49
TMEM39A-206ENST00000473684 GSPT1P15170 499 aaKnown RBP5.74□□□□□ -1.49
TMEM39A-206ENST00000473684 ATP5JP18859 108 aa5.74□□□□□ -1.49
TMEM39A-206ENST00000473684 VCAM1P19320 739 aa5.74□□□□□ -1.49
TMEM39A-206ENST00000473684 SOX9P48436 509 aa5.74□□□□□ -1.49
TMEM39A-206ENST00000473684 GAS6Q14393 721 aa5.74□□□□□ -1.49
TMEM39A-206ENST00000473684 PCNX4Q63HM2 1172 aa5.74□□□□□ -1.49
TMEM39A-206ENST00000473684 ZNF280DQ6N043 979 aa5.74□□□□□ -1.49
TMEM39A-206ENST00000473684 CCDC80Q76M96 950 aa5.74□□□□□ -1.49
TMEM39A-206ENST00000473684 GOLM1Q8NBJ4 401 aa5.74□□□□□ -1.49
TMEM39A-206ENST00000473684 FAM76AQ8TAV0 307 aa5.74□□□□□ -1.49
TMEM39A-206ENST00000473684 BCAS4Q8TDM0 211 aa5.74□□□□□ -1.49
TMEM39A-206ENST00000473684 SMCR8Q8TEV9 937 aaPredicted RBP5.74□□□□□ -1.49
TMEM39A-206ENST00000473684 CLSTN2Q9H4D0 955 aa5.74□□□□□ -1.49
TMEM39A-206ENST00000473684 TRPV5Q9NQA5 729 aa5.74□□□□□ -1.49
TMEM39A-206ENST00000473684 TMOD4Q9NZQ9 345 aa5.74□□□□□ -1.49
TMEM39A-206ENST00000473684 TNS1Q9HBL0 1735 aaKnown RBP5.74□□□□□ -1.49
TMEM39A-206ENST00000473684 STX6O43752 255 aa5.73□□□□□ -1.49
TMEM39A-206ENST00000473684 B3GALT4O96024 378 aa5.73□□□□□ -1.49
TMEM39A-206ENST00000473684 MX2P20592 715 aa5.73□□□□□ -1.49
TMEM39A-206ENST00000473684 BMP6P22004 513 aa5.73□□□□□ -1.49
TMEM39A-206ENST00000473684 PCDH1Q08174 1060 aa5.73□□□□□ -1.49
TMEM39A-206ENST00000473684 DYNC1I2Q13409 638 aaKnown RBP5.73□□□□□ -1.49
TMEM39A-206ENST00000473684 ZNF423Q2M1K9 1284 aa5.73□□□□□ -1.49
TMEM39A-206ENST00000473684 SOGA3Q5TF21 947 aa5.73□□□□□ -1.49
TMEM39A-206ENST00000473684 SFMBT2Q5VUG0 894 aa5.73□□□□□ -1.49
TMEM39A-206ENST00000473684 BZW1Q7L1Q6 419 aaKnown RBP5.73□□□□□ -1.49
TMEM39A-206ENST00000473684 ARHGAP45Q92619 1136 aa5.73□□□□□ -1.49
TMEM39A-206ENST00000473684 TESK2Q96S53 571 aa5.73□□□□□ -1.49
TMEM39A-206ENST00000473684 SLC40A1Q9NP59 571 aa5.73□□□□□ -1.49
TMEM39A-206ENST00000473684 UBP1Q9NZI7 540 aa5.73□□□□□ -1.49
TMEM39A-206ENST00000473684 EFR3BQ9Y2G0 817 aa5.73□□□□□ -1.49
TMEM39A-206ENST00000473684 USP16Q9Y5T5 823 aa5.73□□□□□ -1.49
TMEM39A-206ENST00000473684 IPO5O00410 1097 aaKnown RBP5.73□□□□□ -1.49
TMEM39A-206ENST00000473684 LUC7L3O95232 432 aaKnown RBP5.73□□□□□ -1.49
TMEM39A-206ENST00000473684 YY1P25490 414 aa5.73□□□□□ -1.49
TMEM39A-206ENST00000473684 ADH7P40394 386 aa5.73□□□□□ -1.49
TMEM39A-206ENST00000473684 ZNF157P51786 506 aaPredicted RBP5.73□□□□□ -1.49
TMEM39A-206ENST00000473684 NEXNQ0ZGT2 675 aa5.73□□□□□ -1.49
TMEM39A-206ENST00000473684 COL9A2Q14055 689 aaPredicted RBP5.73□□□□□ -1.49
TMEM39A-206ENST00000473684 SNAP47Q5SQN1 464 aa5.73□□□□□ -1.49
TMEM39A-206ENST00000473684 RASIP1Q5U651 963 aa5.73□□□□□ -1.49
TMEM39A-206ENST00000473684 SRGAP1Q7Z6B7 1085 aa5.73□□□□□ -1.49
TMEM39A-206ENST00000473684 LEO1Q8WVC0 666 aaPredicted RBP5.73□□□□□ -1.49
TMEM39A-206ENST00000473684 ACSBG1Q96GR2 724 aa5.73□□□□□ -1.49
TMEM39A-206ENST00000473684 TSC22D3Q99576 134 aa5.73□□□□□ -1.49
TMEM39A-206ENST00000473684 LPIN3Q9BQK8 851 aa5.73□□□□□ -1.49
TMEM39A-206ENST00000473684 SMG9Q9H0W8 520 aaKnown RBP5.73□□□□□ -1.49
TMEM39A-206ENST00000473684 FRRS1LQ9P0K9 344 aa5.73□□□□□ -1.49
TMEM39A-206ENST00000473684 SPATA7Q9P0W8 599 aa5.73□□□□□ -1.49
TMEM39A-206ENST00000473684 HOOK1Q9UJC3 728 aaKnown RBP5.73□□□□□ -1.49
TMEM39A-206ENST00000473684 WDR37Q9Y2I8 494 aa5.73□□□□□ -1.49
TMEM39A-206ENST00000473684 PPIP5K1Q6PFW1 1433 aa5.72□□□□□ -1.49
TMEM39A-206ENST00000473684 LCE2BO14633 110 aa5.72□□□□□ -1.49
TMEM39A-206ENST00000473684 KIF3BO15066 747 aa5.72□□□□□ -1.49
TMEM39A-206ENST00000473684 PTPRAP18433 802 aa5.72□□□□□ -1.49
TMEM39A-206ENST00000473684 ADH6P28332 368 aa5.72□□□□□ -1.49
TMEM39A-206ENST00000473684 SESN3P58005 492 aa5.72□□□□□ -1.49
TMEM39A-206ENST00000473684 CHMP4BP1P59074 171 aa5.72□□□□□ -1.49
TMEM39A-206ENST00000473684 PRPF4BQ13523 1007 aaKnown RBP5.72□□□□□ -1.49
TMEM39A-206ENST00000473684 KLHL10Q6JEL2 608 aa5.72□□□□□ -1.49
TMEM39A-206ENST00000473684 CYB5D1Q6P9G0 228 aa5.72□□□□□ -1.49
TMEM39A-206ENST00000473684 CRELD2Q6UXH1 353 aaPredicted RBP5.72□□□□□ -1.49
TMEM39A-206ENST00000473684 FAM196AQ6ZSG2 479 aa5.72□□□□□ -1.49
TMEM39A-206ENST00000473684 GBP7Q8N8V2 638 aaPredicted RBP5.72□□□□□ -1.49
TMEM39A-206ENST00000473684 LSM14AQ8ND56 463 aaKnown RBP5.72□□□□□ -1.49
TMEM39A-206ENST00000473684 CUL5Q93034 780 aa5.72□□□□□ -1.49
TMEM39A-206ENST00000473684 EPC1Q9H2F5 836 aa5.72□□□□□ -1.49
TMEM39A-206ENST00000473684 EBF2Q9HAK2 575 aa5.72□□□□□ -1.49
TMEM39A-206ENST00000473684 RTEL1Q9NZ71 1219 aa5.72□□□□□ -1.49
TMEM39A-206ENST00000473684 ABCF2Q9UG63 623 aa5.72□□□□□ -1.49
TMEM39A-206ENST00000473684 ABCC11Q96J66 1382 aa5.72□□□□□ -1.49
TMEM39A-206ENST00000473684 B4DLN1 442 aa5.72□□□□□ -1.49
TMEM39A-206ENST00000473684 CREB3O43889 395 aa5.72□□□□□ -1.49
TMEM39A-206ENST00000473684 MGRN1O60291 552 aa5.72□□□□□ -1.49
TMEM39A-206ENST00000473684 ATP6V1G1O75348 118 aa5.72□□□□□ -1.49
TMEM39A-206ENST00000473684 MCM3P25205 808 aa5.72□□□□□ -1.49
TMEM39A-206ENST00000473684 CRKP46108 304 aa5.72□□□□□ -1.49
TMEM39A-206ENST00000473684 ELMSAN1Q6PJG2 1045 aa5.72□□□□□ -1.49
TMEM39A-206ENST00000473684 NOP9Q86U38 636 aaKnown RBP5.72□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms