RNA–Protein interactions for RNA: ENST00000471181.6

BRCA1-210, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 5,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-210ENST00000471181 ARMCX5Q6P1M9 558 aa7.44□□□□□ -1.22
BRCA1-210ENST00000471181 PHKBQ93100 1093 aa7.44□□□□□ -1.22
BRCA1-210ENST00000471181 PPP1R14AQ96A00 147 aa7.44□□□□□ -1.22
BRCA1-210ENST00000471181 SH3KBP1Q96B97 665 aa7.44□□□□□ -1.22
BRCA1-210ENST00000471181 THOC1Q96FV9 657 aaKnown RBP7.44□□□□□ -1.22
BRCA1-210ENST00000471181 EIF3CQ99613 913 aaKnown RBP7.44□□□□□ -1.22
BRCA1-210ENST00000471181 DNAJC7Q99615 494 aa7.44□□□□□ -1.22
BRCA1-210ENST00000471181 SMAD5Q99717 465 aaKnown RBP7.44□□□□□ -1.22
BRCA1-210ENST00000471181 GTSE1Q9NYZ3 720 aa7.44□□□□□ -1.22
BRCA1-210ENST00000471181 SELENONQ9NZV5 590 aa7.44□□□□□ -1.22
BRCA1-210ENST00000471181 AFF4Q9UHB7 1163 aaKnown RBP7.44□□□□□ -1.22
BRCA1-210ENST00000471181 FBXL5Q9UKA1 691 aa7.44□□□□□ -1.22
BRCA1-210ENST00000471181 KCNJ14Q9UNX9 436 aa7.44□□□□□ -1.22
BRCA1-210ENST00000471181 PRG3Q9Y2Y8 225 aaPredicted RBP7.44□□□□□ -1.22
BRCA1-210ENST00000471181 PCF11O94913 1555 aaKnown RBP7.44□□□□□ -1.22
BRCA1-210ENST00000471181 MYL7Q01449 175 aa7.44□□□□□ -1.22
BRCA1-210ENST00000471181 WASHC5Q12768 1159 aa7.44□□□□□ -1.22
BRCA1-210ENST00000471181 TDRD7Q8NHU6 1098 aaKnown RBP7.44□□□□□ -1.22
BRCA1-210ENST00000471181 MRPS26Q9BYN8 205 aaKnown RBP7.44□□□□□ -1.22
BRCA1-210ENST00000471181 SLITRK6Q9H5Y7 841 aa7.44□□□□□ -1.22
BRCA1-210ENST00000471181 XPO5Q9HAV4 1204 aaKnown RBP eCLIP7.44□□□□□ -1.22
BRCA1-210ENST00000471181 PLEKHG3A1L390 1219 aa7.44□□□□□ -1.22
BRCA1-210ENST00000471181 ARL4AP40617 200 aa7.44□□□□□ -1.22
BRCA1-210ENST00000471181 STAT2P52630 851 aa7.44□□□□□ -1.22
BRCA1-210ENST00000471181 RCSD1Q6JBY9 416 aa7.44□□□□□ -1.22
BRCA1-210ENST00000471181 DIS3L2Q8IYB7 885 aaKnown RBP7.44□□□□□ -1.22
BRCA1-210ENST00000471181 ANKRD36BP1Q96IX9 119 aa7.44□□□□□ -1.22
BRCA1-210ENST00000471181 WDR3Q9UNX4 943 aaKnown RBP eCLIP7.44□□□□□ -1.22
BRCA1-210ENST00000471181 ADCY3O60266 1144 aa7.43□□□□□ -1.22
BRCA1-210ENST00000471181 ALAS1P13196 640 aa7.43□□□□□ -1.22
BRCA1-210ENST00000471181 PPARGP37231 505 aaPredicted RBP7.43□□□□□ -1.22
BRCA1-210ENST00000471181 MORC3Q14149 939 aa7.43□□□□□ -1.22
BRCA1-210ENST00000471181 TBC1D10BQ4KMP7 808 aaPredicted RBP7.43□□□□□ -1.22
BRCA1-210ENST00000471181 BTNL9Q6UXG8 535 aa7.43□□□□□ -1.22
BRCA1-210ENST00000471181 CCDC84Q86UT8 332 aaPredicted RBP7.43□□□□□ -1.22
BRCA1-210ENST00000471181 RUNDC3BQ96NL0 473 aa7.43□□□□□ -1.22
BRCA1-210ENST00000471181 SLC24A3Q9HC58 644 aa7.43□□□□□ -1.22
BRCA1-210ENST00000471181 POLE3Q9NRF9 147 aa7.43□□□□□ -1.22
BRCA1-210ENST00000471181 NDE1Q9NXR1 346 aa7.43□□□□□ -1.22
BRCA1-210ENST00000471181 ATP8B3O60423 1300 aa7.43□□□□□ -1.22
BRCA1-210ENST00000471181 FRMPD2Q68DX3 1309 aaPredicted RBP7.43□□□□□ -1.22
BRCA1-210ENST00000471181 KDM3AQ9Y4C1 1321 aa7.43□□□□□ -1.22
BRCA1-210ENST00000471181 EIF4E1BA6NMX2 242 aaKnown RBP7.43□□□□□ -1.22
BRCA1-210ENST00000471181 ZNF202O95125 648 aa7.43□□□□□ -1.22
BRCA1-210ENST00000471181 KITP10721 976 aa7.43□□□□□ -1.22
BRCA1-210ENST00000471181 RWDD4Q6NW29 188 aaKnown RBP7.43□□□□□ -1.22
BRCA1-210ENST00000471181 TRAF7Q6Q0C0 670 aa7.43□□□□□ -1.22
BRCA1-210ENST00000471181 FASTKD5Q7L8L6 764 aaKnown RBP7.43□□□□□ -1.22
BRCA1-210ENST00000471181 MYOCDQ8IZQ8 938 aa7.43□□□□□ -1.22
BRCA1-210ENST00000471181 TUBB6Q9BUF5 446 aa7.43□□□□□ -1.22
BRCA1-210ENST00000471181 CDCA7Q9BWT1 371 aaPredicted RBP7.43□□□□□ -1.22
BRCA1-210ENST00000471181 PDE11AQ9HCR9 933 aa7.43□□□□□ -1.22
BRCA1-210ENST00000471181 SARS2Q9NP81 518 aaKnown RBP7.43□□□□□ -1.22
BRCA1-210ENST00000471181 PRDM5Q9NQX1 630 aaPredicted RBP7.43□□□□□ -1.22
BRCA1-210ENST00000471181 CSADQ9Y600 493 aa7.43□□□□□ -1.22
BRCA1-210ENST00000471181 NEMP1O14524 444 aa7.43□□□□□ -1.22
BRCA1-210ENST00000471181 GNPATO15228 680 aa7.43□□□□□ -1.22
BRCA1-210ENST00000471181 GUCA1CO95843 209 aa7.43□□□□□ -1.22
BRCA1-210ENST00000471181 HIBADHP31937 336 aaKnown RBP7.43□□□□□ -1.22
BRCA1-210ENST00000471181 CCDC15Q0P6D6 951 aa7.43□□□□□ -1.22
BRCA1-210ENST00000471181 DCAF4L1Q3SXM0 396 aa7.43□□□□□ -1.22
BRCA1-210ENST00000471181 ATL3Q6DD88 541 aa7.43□□□□□ -1.22
BRCA1-210ENST00000471181 PPP1R16BQ96T49 567 aa7.43□□□□□ -1.22
BRCA1-210ENST00000471181 SENP1Q9P0U3 644 aa7.43□□□□□ -1.22
BRCA1-210ENST00000471181 KCNG1Q9UIX4 513 aa7.43□□□□□ -1.22
BRCA1-210ENST00000471181 GGA1Q9UJY5 639 aa7.43□□□□□ -1.22
BRCA1-210ENST00000471181 PAIP2BQ9ULR5 123 aaKnown RBP7.43□□□□□ -1.22
BRCA1-210ENST00000471181 MAGI3Q5TCQ9 1506 aa7.43□□□□□ -1.22
BRCA1-210ENST00000471181 RIMBP3CA6NJZ7 1639 aa7.43□□□□□ -1.22
BRCA1-210ENST00000471181 RIMBP3BA6NNM3 1639 aa7.43□□□□□ -1.22
BRCA1-210ENST00000471181 RIMBP3Q9UFD9 1639 aa7.43□□□□□ -1.22
BRCA1-210ENST00000471181 PDHA1P08559 390 aa7.43□□□□□ -1.22
BRCA1-210ENST00000471181 MED21Q13503 144 aa7.43□□□□□ -1.22
BRCA1-210ENST00000471181 KRT72Q14CN4 511 aa7.43□□□□□ -1.22
BRCA1-210ENST00000471181 LLGL1Q15334 1064 aa7.43□□□□□ -1.22
BRCA1-210ENST00000471181 NDUFAF2Q8N183 169 aa7.43□□□□□ -1.22
BRCA1-210ENST00000471181 PI4K2BQ8TCG2 481 aa7.43□□□□□ -1.22
BRCA1-210ENST00000471181 PDCD6IPQ8WUM4 868 aaKnown RBP7.43□□□□□ -1.22
BRCA1-210ENST00000471181 TESK2Q96S53 571 aa7.43□□□□□ -1.22
BRCA1-210ENST00000471181 ASPSCR1Q9BZE9 553 aa7.43□□□□□ -1.22
BRCA1-210ENST00000471181 GINM1Q9NU53 330 aa7.43□□□□□ -1.22
BRCA1-210ENST00000471181 RGL1Q9NZL6 768 aa7.43□□□□□ -1.22
BRCA1-210ENST00000471181 SERTAD1Q9UHV2 236 aa7.43□□□□□ -1.22
BRCA1-210ENST00000471181 CCDC195A0A1B0GUA6 201 aa7.43□□□□□ -1.22
BRCA1-210ENST00000471181 M0R2C6 588 aa7.43□□□□□ -1.22
BRCA1-210ENST00000471181 SEC24DO94855 1032 aaPredicted RBP7.43□□□□□ -1.22
BRCA1-210ENST00000471181 SRGAP2CP0DJJ0 459 aa7.43□□□□□ -1.22
BRCA1-210ENST00000471181 RPS6KB1P23443 525 aa7.43□□□□□ -1.22
BRCA1-210ENST00000471181 ATP2B4P23634 1241 aa7.43□□□□□ -1.22
BRCA1-210ENST00000471181 MAPK4P31152 587 aa7.43□□□□□ -1.22
BRCA1-210ENST00000471181 TECP42680 631 aa7.43□□□□□ -1.22
BRCA1-210ENST00000471181 AARSP49588 968 aaKnown RBP eCLIP7.43□□□□□ -1.22
BRCA1-210ENST00000471181 DEUP1Q05D60 604 aa7.43□□□□□ -1.22
BRCA1-210ENST00000471181 EHHADHQ08426 723 aa7.43□□□□□ -1.22
BRCA1-210ENST00000471181 MAPKAPK5Q8IW41 473 aa7.43□□□□□ -1.22
BRCA1-210ENST00000471181 OTUB1Q96FW1 271 aaPredicted RBP7.43□□□□□ -1.22
BRCA1-210ENST00000471181 YIPF3Q9GZM5 350 aa7.43□□□□□ -1.22
BRCA1-210ENST00000471181 DONSONQ9NYP3 566 aa7.43□□□□□ -1.22
BRCA1-210ENST00000471181 EFCAB8A8MWE9 144 aa7.42□□□□□ -1.22
BRCA1-210ENST00000471181 LZTS3O60299 673 aaPredicted RBP7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms