RNA–Protein interactions for RNA: ENST00000469585.5

PTCD3-208, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 2

Gene PTCD3, Length 885 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-208ENST00000469585 LMOD3Q0VAK6 560 aa8.08□□□□□ -1.12
PTCD3-208ENST00000469585 TEFQ10587 303 aa8.08□□□□□ -1.12
PTCD3-208ENST00000469585 THAP5Q7Z6K1 395 aa8.08□□□□□ -1.12
PTCD3-208ENST00000469585 DEFB132Q7Z7B7 95 aa8.08□□□□□ -1.12
PTCD3-208ENST00000469585 SYTL5Q8TDW5 730 aaPredicted RBP8.08□□□□□ -1.12
PTCD3-208ENST00000469585 GBP3Q9H0R5 595 aa8.08□□□□□ -1.12
PTCD3-208ENST00000469585 TRIT1Q9H3H1 467 aaKnown RBP8.08□□□□□ -1.12
PTCD3-208ENST00000469585 MINPP1Q9UNW1 487 aa8.08□□□□□ -1.12
PTCD3-208ENST00000469585 FHOD1Q9Y613 1164 aa8.08□□□□□ -1.12
PTCD3-208ENST00000469585 WASH4PA8MWX3 477 aa8.07□□□□□ -1.12
PTCD3-208ENST00000469585 GAB4Q2WGN9 574 aa8.07□□□□□ -1.12
PTCD3-208ENST00000469585 ADAT2Q7Z6V5 191 aaKnown RBP8.07□□□□□ -1.12
PTCD3-208ENST00000469585 TSPYL5Q86VY4 417 aaPredicted RBP8.07□□□□□ -1.12
PTCD3-208ENST00000469585 TTC5Q8N0Z6 440 aa8.07□□□□□ -1.12
PTCD3-208ENST00000469585 DAGLBQ8NCG7 672 aa8.07□□□□□ -1.12
PTCD3-208ENST00000469585 BRF1Q92994 677 aa8.07□□□□□ -1.12
PTCD3-208ENST00000469585 ZNF669Q96BR6 464 aaPredicted RBP8.07□□□□□ -1.12
PTCD3-208ENST00000469585 RCC1LQ96I51 464 aaKnown RBP8.07□□□□□ -1.12
PTCD3-208ENST00000469585 ASCC2Q9H1I8 757 aaPredicted RBP8.07□□□□□ -1.12
PTCD3-208ENST00000469585 CHST7Q9NS84 486 aa8.07□□□□□ -1.12
PTCD3-208ENST00000469585 GPATCH2Q9NW75 528 aa8.07□□□□□ -1.12
PTCD3-208ENST00000469585 RGPD2P0DJD1 1756 aa8.07□□□□□ -1.12
PTCD3-208ENST00000469585 PPM1BO75688 479 aa8.06□□□□□ -1.12
PTCD3-208ENST00000469585 PHKG2P15735 406 aa8.06□□□□□ -1.12
PTCD3-208ENST00000469585 PRKAR2BP31323 418 aa8.06□□□□□ -1.12
PTCD3-208ENST00000469585 CD97P48960 835 aa8.06□□□□□ -1.12
PTCD3-208ENST00000469585 PRKCQQ04759 706 aa8.06□□□□□ -1.12
PTCD3-208ENST00000469585 EZH2Q15910 746 aaKnown RBP8.06□□□□□ -1.12
PTCD3-208ENST00000469585 NOL9Q5SY16 702 aaKnown RBP8.06□□□□□ -1.12
PTCD3-208ENST00000469585 SPATC1Q76KD6 591 aa8.06□□□□□ -1.12
PTCD3-208ENST00000469585 ARHGEF39Q8N4T4 335 aa8.06□□□□□ -1.12
PTCD3-208ENST00000469585 UBE2FQ969M7 185 aa8.06□□□□□ -1.12
PTCD3-208ENST00000469585 MRFAP1L1Q96HT8 127 aa8.06□□□□□ -1.12
PTCD3-208ENST00000469585 HRASLS5Q96KN8 279 aa8.06□□□□□ -1.12
PTCD3-208ENST00000469585 BSDC1Q9NW68 430 aaPredicted RBP8.06□□□□□ -1.12
PTCD3-208ENST00000469585 ZSWIM5Q9P217 1185 aa8.06□□□□□ -1.12
PTCD3-208ENST00000469585 ZMYM5Q9UJ78 669 aa8.06□□□□□ -1.12
PTCD3-208ENST00000469585 CCNL1Q9UK58 526 aaPredicted RBP8.06□□□□□ -1.12
PTCD3-208ENST00000469585 VAV3Q9UKW4 847 aa8.06□□□□□ -1.12
PTCD3-208ENST00000469585 KDRP35968 1356 aa8.06□□□□□ -1.12
PTCD3-208ENST00000469585 NCAPD2Q15021 1401 aa8.05□□□□□ -1.12
PTCD3-208ENST00000469585 SPINK2P20155 84 aa8.05□□□□□ -1.12
PTCD3-208ENST00000469585 TPP2P29144 1249 aaPredicted RBP8.05□□□□□ -1.12
PTCD3-208ENST00000469585 CTSKP43235 329 aa8.05□□□□□ -1.12
PTCD3-208ENST00000469585 TXNRD1Q16881 649 aa8.05□□□□□ -1.12
PTCD3-208ENST00000469585 CLEC16AQ2KHT3 1053 aa8.05□□□□□ -1.12
PTCD3-208ENST00000469585 SV2CQ496J9 727 aa8.05□□□□□ -1.12
PTCD3-208ENST00000469585 MTERF2Q49AM1 385 aa8.05□□□□□ -1.12
PTCD3-208ENST00000469585 NOP9Q86U38 636 aaKnown RBP8.05□□□□□ -1.12
PTCD3-208ENST00000469585 DTX1Q86Y01 620 aa8.05□□□□□ -1.12
PTCD3-208ENST00000469585 FIBCD1Q8N539 461 aa8.05□□□□□ -1.12
PTCD3-208ENST00000469585 ZNF655Q8N720 491 aaPredicted RBP8.05□□□□□ -1.12
PTCD3-208ENST00000469585 ADCY4Q8NFM4 1077 aa8.05□□□□□ -1.12
PTCD3-208ENST00000469585 MISP3Q96FF7 219 aa8.05□□□□□ -1.12
PTCD3-208ENST00000469585 DNAJC7Q99615 494 aa8.05□□□□□ -1.12
PTCD3-208ENST00000469585 PRKRIP1Q9H875 184 aaPredicted RBP8.05□□□□□ -1.12
PTCD3-208ENST00000469585 TFCP2L1Q9NZI6 479 aa8.05□□□□□ -1.12
PTCD3-208ENST00000469585 DIS3Q9Y2L1 958 aaKnown RBP8.05□□□□□ -1.12
PTCD3-208ENST00000469585 NHSQ6T4R5 1651 aa8.05□□□□□ -1.12
PTCD3-208ENST00000469585 PKD1L3Q7Z443 1732 aa8.04□□□□□ -1.12
PTCD3-208ENST00000469585 KIAA1324LA8MWY0 1029 aaPredicted RBP8.04□□□□□ -1.12
PTCD3-208ENST00000469585 CYP27B1O15528 508 aa8.04□□□□□ -1.12
PTCD3-208ENST00000469585 KCNQ2O43526 872 aa8.04□□□□□ -1.12
PTCD3-208ENST00000469585 PRNPP04156 253 aa8.04□□□□□ -1.12
PTCD3-208ENST00000469585 CALD1Q05682 793 aaKnown RBP8.04□□□□□ -1.12
PTCD3-208ENST00000469585 IFRD2Q12894 506 aaPredicted RBP8.04□□□□□ -1.12
PTCD3-208ENST00000469585 AOC3Q16853 763 aa8.04□□□□□ -1.12
PTCD3-208ENST00000469585 WFDC3Q8IUB2 231 aa8.04□□□□□ -1.12
PTCD3-208ENST00000469585 BVESQ8NE79 360 aa8.04□□□□□ -1.12
PTCD3-208ENST00000469585 FLAD1Q8NFF5 587 aa8.04□□□□□ -1.12
PTCD3-208ENST00000469585 TCTN2Q96GX1 697 aa8.04□□□□□ -1.12
PTCD3-208ENST00000469585 CAMKK2Q96RR4 588 aa8.04□□□□□ -1.12
PTCD3-208ENST00000469585 DSCC1Q9BVC3 393 aa8.04□□□□□ -1.12
PTCD3-208ENST00000469585 LGR4Q9BXB1 951 aa8.04□□□□□ -1.12
PTCD3-208ENST00000469585 NOL6Q9H6R4 1146 aaKnown RBP8.04□□□□□ -1.12
PTCD3-208ENST00000469585 ATP13A1Q9HD20 1204 aa8.04□□□□□ -1.12
PTCD3-208ENST00000469585 CGGBP1Q9UFW8 167 aaPredicted RBP8.04□□□□□ -1.12
PTCD3-208ENST00000469585 SUGT1Q9Y2Z0 365 aa8.04□□□□□ -1.12
PTCD3-208ENST00000469585 MAP3K5Q99683 1374 aa8.04□□□□□ -1.12
PTCD3-208ENST00000469585 PALLDQ8WX93 1383 aa8.03□□□□□ -1.12
PTCD3-208ENST00000469585 CAPNS1P04632 268 aa8.03□□□□□ -1.12
PTCD3-208ENST00000469585 ITGAVP06756 1048 aa8.03□□□□□ -1.12
PTCD3-208ENST00000469585 ZNF227Q86WZ6 799 aa8.03□□□□□ -1.12
PTCD3-208ENST00000469585 BCL7CQ8WUZ0 217 aaPredicted RBP8.03□□□□□ -1.12
PTCD3-208ENST00000469585 ASB11Q8WXH4 323 aa8.03□□□□□ -1.12
PTCD3-208ENST00000469585 SGSM3Q96HU1 749 aa8.03□□□□□ -1.12
PTCD3-208ENST00000469585 MRGPRX3Q96LB0 322 aa8.03□□□□□ -1.12
PTCD3-208ENST00000469585 EMC9Q9Y3B6 208 aa8.03□□□□□ -1.12
PTCD3-208ENST00000469585 DOT1LQ8TEK3 1739 aa8.03□□□□□ -1.12
PTCD3-208ENST00000469585 TNS1Q9HBL0 1735 aaKnown RBP8.03□□□□□ -1.12
PTCD3-208ENST00000469585 RGPD3A6NKT7 1758 aaPredicted RBP8.02□□□□□ -1.13
PTCD3-208ENST00000469585 RGPD4Q7Z3J3 1758 aa8.02□□□□□ -1.13
PTCD3-208ENST00000469585 SBF2Q86WG5 1849 aa8.02□□□□□ -1.13
PTCD3-208ENST00000469585 A0A1W2PQU0 124 aa8.02□□□□□ -1.13
PTCD3-208ENST00000469585 H0Y8X5 98 aa8.02□□□□□ -1.13
PTCD3-208ENST00000469585 MEIS1O00470 390 aa8.02□□□□□ -1.13
PTCD3-208ENST00000469585 HTATSF1O43719 755 aaKnown RBP8.02□□□□□ -1.13
PTCD3-208ENST00000469585 ESR1P03372 595 aa8.02□□□□□ -1.13
PTCD3-208ENST00000469585 GSNP06396 782 aa8.02□□□□□ -1.13
PTCD3-208ENST00000469585 SSTR4P31391 388 aa8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms