RNA–Protein interactions for RNA: ENST00000469358.5

VARS2-205, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 5

Gene VARS2, Length 3,429 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-205ENST00000469358 KIAA1551Q9HCM1 1747 aa13.36□□□□□ -0.27
VARS2-205ENST00000469358 RAD21O60216 631 aa13.35□□□□□ -0.27
VARS2-205ENST00000469358 SHOX2O60902 331 aaPredicted RBP13.35□□□□□ -0.27
VARS2-205ENST00000469358 HEXIM1O94992 359 aaKnown RBP13.35□□□□□ -0.27
VARS2-205ENST00000469358 ACTN1P12814 892 aa13.35□□□□□ -0.27
VARS2-205ENST00000469358 PAFAH1B1P43034 410 aa13.35□□□□□ -0.27
VARS2-205ENST00000469358 PICALMQ13492 652 aa13.35□□□□□ -0.27
VARS2-205ENST00000469358 RAPGEF1Q13905 1077 aa13.35□□□□□ -0.27
VARS2-205ENST00000469358 ASTE1Q2TB18 679 aaPredicted RBP13.35□□□□□ -0.27
VARS2-205ENST00000469358 FBXW10Q5XX13 1052 aa13.35□□□□□ -0.27
VARS2-205ENST00000469358 FAM133AQ8N9E0 248 aa13.35□□□□□ -0.27
VARS2-205ENST00000469358 FAM107BQ9H098 131 aa13.35□□□□□ -0.27
VARS2-205ENST00000469358 CENPHQ9H3R5 247 aa13.35□□□□□ -0.27
VARS2-205ENST00000469358 CUEDC2Q9H467 287 aa13.35□□□□□ -0.27
VARS2-205ENST00000469358 BCAS3Q9H6U6 928 aa13.35□□□□□ -0.27
VARS2-205ENST00000469358 A0A087X0T9 212 aa13.35□□□□□ -0.27
VARS2-205ENST00000469358 E9PMD0 336 aa13.35□□□□□ -0.27
VARS2-205ENST00000469358 FAM228BP0C875 321 aa13.35□□□□□ -0.27
VARS2-205ENST00000469358 GNA11P29992 359 aa13.35□□□□□ -0.27
VARS2-205ENST00000469358 FAM83BQ5T0W9 1011 aa13.35□□□□□ -0.27
VARS2-205ENST00000469358 TTBK2Q6IQ55 1244 aa13.35□□□□□ -0.27
VARS2-205ENST00000469358 TEX11Q8IYF3 940 aa13.35□□□□□ -0.27
VARS2-205ENST00000469358 NOX5Q96PH1 765 aa13.35□□□□□ -0.27
VARS2-205ENST00000469358 RUFY1Q96T51 708 aa13.35□□□□□ -0.27
VARS2-205ENST00000469358 GNPATO15228 680 aa13.35□□□□□ -0.27
VARS2-205ENST00000469358 TCP1P17987 556 aaKnown RBP13.35□□□□□ -0.27
VARS2-205ENST00000469358 PPFIA1Q13136 1202 aa13.35□□□□□ -0.27
VARS2-205ENST00000469358 RAD54LQ92698 747 aa13.35□□□□□ -0.27
VARS2-205ENST00000469358 SPATA31A1Q5TZJ5 1347 aa13.34□□□□□ -0.27
VARS2-205ENST00000469358 ZNF233A6NK53 670 aa13.34□□□□□ -0.27
VARS2-205ENST00000469358 EIF3HO15372 352 aaKnown RBP eCLIP13.34□□□□□ -0.271e-7■□□□□ 10.7
VARS2-205ENST00000469358 NNTQ13423 1086 aa13.34□□□□□ -0.27
VARS2-205ENST00000469358 GALNT17Q6IS24 598 aa13.34□□□□□ -0.27
VARS2-205ENST00000469358 DDX42Q86XP3 938 aaKnown RBP eCLIP13.34□□□□□ -0.27
VARS2-205ENST00000469358 OR2W6PQ8NHA6 318 aa13.34□□□□□ -0.27
VARS2-205ENST00000469358 SPZ1Q9BXG8 430 aa13.34□□□□□ -0.27
VARS2-205ENST00000469358 RTFDC1Q9BY42 306 aaPredicted RBP13.34□□□□□ -0.27
VARS2-205ENST00000469358 ANKRD2Q9GZV1 360 aa13.34□□□□□ -0.27
VARS2-205ENST00000469358 F8W031 263 aaPredicted RBP13.34□□□□□ -0.27
VARS2-205ENST00000469358 HSF2BPO75031 334 aa13.34□□□□□ -0.27
VARS2-205ENST00000469358 SEC24CP53992 1094 aa13.34□□□□□ -0.27
VARS2-205ENST00000469358 TADA2BQ86TJ2 420 aa13.34□□□□□ -0.27
VARS2-205ENST00000469358 RNPC3Q96LT9 517 aaKnown RBP13.34□□□□□ -0.27
VARS2-205ENST00000469358 CASZ1Q86V15 1759 aa13.34□□□□□ -0.27
VARS2-205ENST00000469358 SNED1Q8TER0 1413 aa13.34□□□□□ -0.27
VARS2-205ENST00000469358 EBAG9O00559 213 aa13.33□□□□□ -0.27
VARS2-205ENST00000469358 BAG3O95817 575 aa13.33□□□□□ -0.27
VARS2-205ENST00000469358 EPHB4P54760 987 aa13.33□□□□□ -0.27
VARS2-205ENST00000469358 COASYQ13057 564 aa13.33□□□□□ -0.27
VARS2-205ENST00000469358 KIAA0753Q2KHM9 967 aa13.33□□□□□ -0.27
VARS2-205ENST00000469358 SPTY2D1Q68D10 685 aaPredicted RBP13.33□□□□□ -0.27
VARS2-205ENST00000469358 GUF1Q8N442 669 aaKnown RBP13.33□□□□□ -0.27
VARS2-205ENST00000469358 CASKIN2Q8WXE0 1202 aa13.33□□□□□ -0.27
VARS2-205ENST00000469358 SH3GL2Q99962 352 aa13.33□□□□□ -0.27
VARS2-205ENST00000469358 BACH1O14867 736 aa13.33□□□□□ -0.28
VARS2-205ENST00000469358 MARCH6O60337 910 aa13.33□□□□□ -0.28
VARS2-205ENST00000469358 PPP1R11O60927 126 aaPredicted RBP13.33□□□□□ -0.28
VARS2-205ENST00000469358 STAT3P40763 770 aa13.33□□□□□ -0.28
VARS2-205ENST00000469358 SLC10A5Q5PT55 438 aa13.33□□□□□ -0.28
VARS2-205ENST00000469358 CCDC84Q86UT8 332 aaPredicted RBP13.33□□□□□ -0.28
VARS2-205ENST00000469358 PPM1EQ8WY54 764 aa13.33□□□□□ -0.28
VARS2-205ENST00000469358 IRS2Q9Y4H2 1338 aa13.33□□□□□ -0.28
VARS2-205ENST00000469358 LCA5LO95447 670 aa13.33□□□□□ -0.28
VARS2-205ENST00000469358 KRT79Q5XKE5 535 aa13.33□□□□□ -0.28
VARS2-205ENST00000469358 MAGEF1Q9HAY2 307 aa13.33□□□□□ -0.28
VARS2-205ENST00000469358 FAM98CQ17RN3 349 aaKnown RBP13.32□□□□□ -0.28
VARS2-205ENST00000469358 CFAP221Q4G0U5 840 aa13.32□□□□□ -0.28
VARS2-205ENST00000469358 SFMBT2Q5VUG0 894 aa13.32□□□□□ -0.28
VARS2-205ENST00000469358 MYOCDQ8IZQ8 938 aa13.32□□□□□ -0.28
VARS2-205ENST00000469358 PIK3R5Q8WYR1 880 aa13.32□□□□□ -0.28
VARS2-205ENST00000469358 HAS1Q92839 578 aa13.32□□□□□ -0.28
VARS2-205ENST00000469358 DNAJC19Q96DA6 116 aa13.32□□□□□ -0.28
VARS2-205ENST00000469358 AP1M1Q9BXS5 423 aa13.32□□□□□ -0.28
VARS2-205ENST00000469358 NDUFAB1O14561 156 aa13.32□□□□□ -0.28
VARS2-205ENST00000469358 PDHBP11177 359 aa13.32□□□□□ -0.28
VARS2-205ENST00000469358 TAL1P17542 331 aaPredicted RBP13.32□□□□□ -0.28
VARS2-205ENST00000469358 HPDP32754 393 aaPredicted RBP13.32□□□□□ -0.28
VARS2-205ENST00000469358 IKZF4Q9H2S9 585 aa13.32□□□□□ -0.28
VARS2-205ENST00000469358 PANK4Q9NVE7 773 aa13.32□□□□□ -0.28
VARS2-205ENST00000469358 KIAA1024Q9UPX6 916 aa13.32□□□□□ -0.28
VARS2-205ENST00000469358 COL4A3BPQ9Y5P4 624 aa13.32□□□□□ -0.28
VARS2-205ENST00000469358 POTEB3A0JP26 581 aa13.32□□□□□ -0.28
VARS2-205ENST00000469358 POTECB2RU33 542 aa13.32□□□□□ -0.28
VARS2-205ENST00000469358 RAD51CO43502 376 aa13.32□□□□□ -0.28
VARS2-205ENST00000469358 ADCY7P51828 1080 aa13.32□□□□□ -0.28
VARS2-205ENST00000469358 SLC9C1Q4G0N8 1177 aa13.32□□□□□ -0.28
VARS2-205ENST00000469358 CFAP58Q5T655 872 aa13.32□□□□□ -0.28
VARS2-205ENST00000469358 POTEBQ6S5H4 581 aa13.32□□□□□ -0.28
VARS2-205ENST00000469358 NEDD1Q8NHV4 660 aa13.32□□□□□ -0.28
VARS2-205ENST00000469358 AKR1B1P15121 316 aa13.31□□□□□ -0.28
VARS2-205ENST00000469358 CASP5P51878 434 aa13.31□□□□□ -0.28
VARS2-205ENST00000469358 TMEM266Q2M3C6 531 aa13.31□□□□□ -0.28
VARS2-205ENST00000469358 TPTE2Q6XPS3 522 aa13.31□□□□□ -0.28
VARS2-205ENST00000469358 WDR66Q8TBY9 1149 aa13.31□□□□□ -0.28
VARS2-205ENST00000469358 LAMB1P07942 1786 aa13.31□□□□□ -0.28
VARS2-205ENST00000469358 PVALEFA0A1B0GWK0 134 aa13.31□□□□□ -0.28
VARS2-205ENST00000469358 USP17L15C9J2P7 530 aa13.31□□□□□ -0.28
VARS2-205ENST00000469358 USP17L13C9JLJ4 530 aa13.31□□□□□ -0.28
VARS2-205ENST00000469358 USP17L11C9JVI0 530 aa13.31□□□□□ -0.28
VARS2-205ENST00000469358 USP17L18D6R9N7 530 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms