RNA–Protein interactions for RNA: ENST00000467533.5

HDAC3-203, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 663 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-203ENST00000467533 CCDC96Q2M329 555 aa12.13□□□□□ -0.47
HDAC3-203ENST00000467533 RNF207Q6ZRF8 634 aa12.13□□□□□ -0.47
HDAC3-203ENST00000467533 RASGRP2Q7LDG7 609 aa12.13□□□□□ -0.47
HDAC3-203ENST00000467533 DGLUCYQ7Z3D6 616 aa12.13□□□□□ -0.47
HDAC3-203ENST00000467533 DHX37Q8IY37 1157 aaKnown RBP12.13□□□□□ -0.47
HDAC3-203ENST00000467533 SEPT8Q92599 483 aa12.13□□□□□ -0.47
HDAC3-203ENST00000467533 IL17RAQ96F46 866 aa12.13□□□□□ -0.47
HDAC3-203ENST00000467533 PHF7Q9BWX1 381 aaPredicted RBP12.13□□□□□ -0.47
HDAC3-203ENST00000467533 BOLA2Q9H3K6 86 aa12.13□□□□□ -0.47
HDAC3-203ENST00000467533 MTMR7Q9Y216 660 aa12.13□□□□□ -0.47
HDAC3-203ENST00000467533 KMT2BQ9UMN6 2715 aaPredicted RBP12.13□□□□□ -0.47
HDAC3-203ENST00000467533 ADGRA3Q8IWK6 1321 aa12.12□□□□□ -0.47
HDAC3-203ENST00000467533 B4DLN1 442 aa12.12□□□□□ -0.47
HDAC3-203ENST00000467533 ZNF286BP0CG31 522 aa12.12□□□□□ -0.47
HDAC3-203ENST00000467533 EDNRBP24530 442 aa12.12□□□□□ -0.47
HDAC3-203ENST00000467533 BMPR1AP36894 532 aa12.12□□□□□ -0.47
HDAC3-203ENST00000467533 TDO2P48775 406 aa12.12□□□□□ -0.47
HDAC3-203ENST00000467533 MRPL12P52815 198 aaKnown RBP12.12□□□□□ -0.47
HDAC3-203ENST00000467533 ZNF200P98182 395 aaPredicted RBP12.12□□□□□ -0.47
HDAC3-203ENST00000467533 ARHGAP1Q07960 439 aa12.12□□□□□ -0.47
HDAC3-203ENST00000467533 DGKDQ16760 1214 aa12.12□□□□□ -0.47
HDAC3-203ENST00000467533 LY6KQ17RY6 165 aa12.12□□□□□ -0.47
HDAC3-203ENST00000467533 KIAA0753Q2KHM9 967 aa12.12□□□□□ -0.47
HDAC3-203ENST00000467533 RCSD1Q6JBY9 416 aa12.12□□□□□ -0.47
HDAC3-203ENST00000467533 ZSCAN25Q6NSZ9 544 aa12.12□□□□□ -0.47
HDAC3-203ENST00000467533 CLASRPQ8N2M8 674 aaKnown RBP12.12□□□□□ -0.47
HDAC3-203ENST00000467533 RHPN1Q8TCX5 695 aa12.12□□□□□ -0.47
HDAC3-203ENST00000467533 RIPOR3Q96MK2 946 aa12.12□□□□□ -0.47
HDAC3-203ENST00000467533 RANBP17Q9H2T7 1088 aaKnown RBP12.12□□□□□ -0.47
HDAC3-203ENST00000467533 CLEC1BQ9P126 229 aa12.12□□□□□ -0.47
HDAC3-203ENST00000467533 BARX2Q9UMQ3 279 aaPredicted RBP12.12□□□□□ -0.47
HDAC3-203ENST00000467533 RIF1Q5UIP0 2472 aaKnown RBP12.12□□□□□ -0.47
HDAC3-203ENST00000467533 LOC101059915A0A1B0GWI6 518 aaPredicted RBP12.11□□□□□ -0.47
HDAC3-203ENST00000467533 GSG1L2A8MUP6 293 aa12.11□□□□□ -0.47
HDAC3-203ENST00000467533 F2P00734 622 aa12.11□□□□□ -0.47
HDAC3-203ENST00000467533 COASYQ13057 564 aa12.11□□□□□ -0.47
HDAC3-203ENST00000467533 GIMAP6Q6P9H5 292 aa12.11□□□□□ -0.47
HDAC3-203ENST00000467533 EFHBQ8N7U6 833 aa12.11□□□□□ -0.47
HDAC3-203ENST00000467533 DNERQ8NFT8 737 aa12.11□□□□□ -0.47
HDAC3-203ENST00000467533 NEDD1Q8NHV4 660 aa12.11□□□□□ -0.47
HDAC3-203ENST00000467533 STX8Q9UNK0 236 aa12.11□□□□□ -0.47
HDAC3-203ENST00000467533 MYH7BA7E2Y1 1941 aa12.1□□□□□ -0.47
HDAC3-203ENST00000467533 CTSHP09668 335 aa12.1□□□□□ -0.47
HDAC3-203ENST00000467533 RPS6P62753 249 aaKnown RBP12.1□□□□□ -0.47
HDAC3-203ENST00000467533 TFAP4Q01664 338 aa12.1□□□□□ -0.47
HDAC3-203ENST00000467533 HSP90AB4PQ58FF6 505 aa12.1□□□□□ -0.47
HDAC3-203ENST00000467533 CEP85Q6P2H3 762 aa12.1□□□□□ -0.47
HDAC3-203ENST00000467533 CCDC62Q6P9F0 684 aa12.1□□□□□ -0.47
HDAC3-203ENST00000467533 SEPT14Q6ZU15 432 aa12.1□□□□□ -0.47
HDAC3-203ENST00000467533 ADGRD2Q7Z7M1 963 aa12.1□□□□□ -0.47
HDAC3-203ENST00000467533 TMEM105Q8N8V8 129 aa12.1□□□□□ -0.47
HDAC3-203ENST00000467533 RMDN1Q96DB5 314 aa12.1□□□□□ -0.47
HDAC3-203ENST00000467533 CNTNAP3BQ96NU0 1288 aa12.1□□□□□ -0.47
HDAC3-203ENST00000467533 STRBPQ96SI9 672 aaKnown RBP12.1□□□□□ -0.47
HDAC3-203ENST00000467533 CNTNAP3Q9BZ76 1288 aa12.1□□□□□ -0.47
HDAC3-203ENST00000467533 EPB41L4AQ9HCS5 686 aaPredicted RBP12.1□□□□□ -0.47
HDAC3-203ENST00000467533 GVINP1Q7Z2Y8 2422 aa12.1□□□□□ -0.47
HDAC3-203ENST00000467533 HAS3O00219 553 aa12.09□□□□□ -0.47
HDAC3-203ENST00000467533 LINC00271P0C7V0 271 aa12.09□□□□□ -0.47
HDAC3-203ENST00000467533 SLC16A2P36021 539 aa12.09□□□□□ -0.47
HDAC3-203ENST00000467533 NRIP1P48552 1158 aa12.09□□□□□ -0.47
HDAC3-203ENST00000467533 PPP4R3BQ5MIZ7 849 aa12.09□□□□□ -0.47
HDAC3-203ENST00000467533 SYDE2Q5VT97 1194 aa12.09□□□□□ -0.47
HDAC3-203ENST00000467533 RBM23Q86U06 439 aaKnown RBP12.09□□□□□ -0.47
HDAC3-203ENST00000467533 SERINC5Q86VE9 423 aa12.09□□□□□ -0.47
HDAC3-203ENST00000467533 ITPRIPQ8IWB1 547 aa12.09□□□□□ -0.47
HDAC3-203ENST00000467533 CLEC4DQ8WXI8 215 aa12.09□□□□□ -0.47
HDAC3-203ENST00000467533 HAUS7Q99871 368 aa12.09□□□□□ -0.47
HDAC3-203ENST00000467533 VPS13AQ96RL7 3174 aa12.09□□□□□ -0.47
HDAC3-203ENST00000467533 DMDP11532 3685 aa12.09□□□□□ -0.47
HDAC3-203ENST00000467533 PLXNA4Q9HCM2 1894 aa12.08□□□□□ -0.48
HDAC3-203ENST00000467533 ZNF316A6NFI3 1004 aaPredicted RBP12.08□□□□□ -0.48
HDAC3-203ENST00000467533 GLP2RO95838 553 aa12.08□□□□□ -0.48
HDAC3-203ENST00000467533 APPP05067 770 aa12.08□□□□□ -0.48
HDAC3-203ENST00000467533 ATF7P17544 494 aaPredicted RBP12.08□□□□□ -0.48
HDAC3-203ENST00000467533 SP100P23497 879 aaPredicted RBP12.08□□□□□ -0.48
HDAC3-203ENST00000467533 BTG3Q14201 252 aaPredicted RBP12.08□□□□□ -0.48
HDAC3-203ENST00000467533 HIC1Q14526 733 aa12.08□□□□□ -0.48
HDAC3-203ENST00000467533 ZKSCAN2Q63HK3 967 aa12.08□□□□□ -0.48
HDAC3-203ENST00000467533 APBB2Q92870 758 aa12.08□□□□□ -0.48
HDAC3-203ENST00000467533 CLP1Q92989 425 aaKnown RBP12.08□□□□□ -0.48
HDAC3-203ENST00000467533 KIF1BPQ96EK5 621 aa12.08□□□□□ -0.48
HDAC3-203ENST00000467533 PLVAPQ9BX97 442 aa12.08□□□□□ -0.48
HDAC3-203ENST00000467533 EPG5Q9HCE0 2579 aa12.08□□□□□ -0.48
HDAC3-203ENST00000467533 ZNF292O60281 2723 aa12.07□□□□□ -0.48
HDAC3-203ENST00000467533 DMXL1Q9Y485 3027 aa12.07□□□□□ -0.48
HDAC3-203ENST00000467533 C17orf102A2RUQ5 167 aa12.07□□□□□ -0.48
HDAC3-203ENST00000467533 ATP5JP18859 108 aa12.07□□□□□ -0.48
HDAC3-203ENST00000467533 CAMK1Q14012 370 aa12.07□□□□□ -0.48
HDAC3-203ENST00000467533 TTBK2Q6IQ55 1244 aa12.07□□□□□ -0.48
HDAC3-203ENST00000467533 FTSJ3Q8IY81 847 aaKnown RBP12.07□□□□□ -0.48
HDAC3-203ENST00000467533 DCAF4Q8WV16 495 aa12.07□□□□□ -0.48
HDAC3-203ENST00000467533 ATP6V0A1Q93050 837 aa12.07□□□□□ -0.48
HDAC3-203ENST00000467533 OSBPL7Q9BZF2 842 aa12.07□□□□□ -0.48
HDAC3-203ENST00000467533 PLAGL2Q9UPG8 496 aa12.07□□□□□ -0.48
HDAC3-203ENST00000467533 FRMPD2Q68DX3 1309 aaPredicted RBP12.07□□□□□ -0.48
HDAC3-203ENST00000467533 TSPY2A6NKD2 308 aa12.06□□□□□ -0.48
HDAC3-203ENST00000467533 SLC3A2P08195 630 aaKnown RBP12.06□□□□□ -0.48
HDAC3-203ENST00000467533 DNAJB1P25685 340 aa12.06□□□□□ -0.48
HDAC3-203ENST00000467533 MTMR3Q13615 1198 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms