RNA–Protein interactions for RNA: ENST00000466969.1

UBR4-210, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2

Gene UBR4, Length 510 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-210ENST00000466969 FBXL21Q9UKT6 434 aa15.13■□□□□ 0.01
UBR4-210ENST00000466969 USP18Q9UMW8 372 aa15.13■□□□□ 0.01
UBR4-210ENST00000466969 MAST4O15021 2626 aa15.12■□□□□ 0.01
UBR4-210ENST00000466969 PROS1P07225 676 aa15.12■□□□□ 0.01
UBR4-210ENST00000466969 SP9P0CG40 484 aa15.12■□□□□ 0.01
UBR4-210ENST00000466969 TXNP10599 105 aaKnown RBP15.12■□□□□ 0.01
UBR4-210ENST00000466969 CASTP20810 708 aaKnown RBP15.12■□□□□ 0.01
UBR4-210ENST00000466969 RFX1P22670 979 aa15.12■□□□□ 0.01
UBR4-210ENST00000466969 TECP42680 631 aa15.12■□□□□ 0.01
UBR4-210ENST00000466969 ALDH5A1P51649 535 aaPredicted RBP15.12■□□□□ 0.01
UBR4-210ENST00000466969 AMOTL1Q8IY63 956 aa15.12■□□□□ 0.01
UBR4-210ENST00000466969 MRPL50Q8N5N7 158 aaKnown RBP15.12■□□□□ 0.01
UBR4-210ENST00000466969 SDR42E1Q8WUS8 393 aa15.12■□□□□ 0.01
UBR4-210ENST00000466969 PURBQ96QR8 312 aaKnown RBP15.12■□□□□ 0.01
UBR4-210ENST00000466969 ALG1Q9BT22 464 aa15.12■□□□□ 0.01
UBR4-210ENST00000466969 IGSF5Q9NSI5 407 aa15.12■□□□□ 0.01
UBR4-210ENST00000466969 RNF216Q9NWF9 866 aaPredicted RBP15.12■□□□□ 0.01
UBR4-210ENST00000466969 GCN1Q92616 2671 aaKnown RBP15.11■□□□□ 0.01
UBR4-210ENST00000466969 LOC102724159A0A0B4J2E5 919 aa15.11■□□□□ 0.01
UBR4-210ENST00000466969 ZIC2O95409 532 aaPredicted RBP15.11■□□□□ 0.01
UBR4-210ENST00000466969 G3BP1Q13283 466 aaKnown RBP eCLIP15.11■□□□□ 0.01
UBR4-210ENST00000466969 PWP2Q15269 919 aaKnown RBP15.11■□□□□ 0.01
UBR4-210ENST00000466969 ANKRD54Q6NXT1 300 aa15.11■□□□□ 0.01
UBR4-210ENST00000466969 SIX5Q8N196 739 aa15.11■□□□□ 0.01
UBR4-210ENST00000466969 VN1R2Q8NFZ6 395 aa15.11■□□□□ 0.01
UBR4-210ENST00000466969 KAT2BQ92831 832 aa15.11■□□□□ 0.01
UBR4-210ENST00000466969 APBB2Q92870 758 aa15.11■□□□□ 0.01
UBR4-210ENST00000466969 ZNF512BQ96KM6 892 aaPredicted RBP15.11■□□□□ 0.01
UBR4-210ENST00000466969 DBNDD2Q9BQY9 259 aa15.11■□□□□ 0.01
UBR4-210ENST00000466969 KATNAL1Q9BW62 490 aa15.11■□□□□ 0.01
UBR4-210ENST00000466969 LIMD1Q9UGP4 676 aa15.11■□□□□ 0.01
UBR4-210ENST00000466969 SPEGQ15772 3267 aa15.11■□□□□ 0.01
UBR4-210ENST00000466969 ASH1LQ9NR48 2969 aaKnown RBP15.11■□□□□ 0.01
UBR4-210ENST00000466969 FANCMQ8IYD8 2048 aa15.1■□□□□ 0.01
UBR4-210ENST00000466969 MMP3P08254 477 aa15.1■□□□□ 0.01
UBR4-210ENST00000466969 KCNA4P22459 653 aa15.1■□□□□ 0.01
UBR4-210ENST00000466969 DHX37Q8IY37 1157 aaKnown RBP15.1■□□□□ 0.01
UBR4-210ENST00000466969 KLHL23Q8NBE8 558 aa15.1■□□□□ 0.01
UBR4-210ENST00000466969 AFG1LQ8WV93 481 aa15.1■□□□□ 0.01
UBR4-210ENST00000466969 NECTIN4Q96NY8 510 aa15.1■□□□□ 0.01
UBR4-210ENST00000466969 MPHOSPH6Q99547 160 aaKnown RBP15.1■□□□□ 0.01
UBR4-210ENST00000466969 ERVK-5Q9HDB9 667 aa15.1■□□□□ 0.01
UBR4-210ENST00000466969 ISY1Q9ULR0 285 aaKnown RBP15.1■□□□□ 0.01
UBR4-210ENST00000466969 HOXB8P17481 243 aaPredicted RBP15.09■□□□□ 0.01
UBR4-210ENST00000466969 PSEN2P49810 448 aa15.09■□□□□ 0.01
UBR4-210ENST00000466969 PDE4DQ08499 809 aa15.09■□□□□ 0.01
UBR4-210ENST00000466969 DUSP6Q16828 381 aa15.09■□□□□ 0.01
UBR4-210ENST00000466969 MUM1L1Q5H9M0 696 aa15.09■□□□□ 0.01
UBR4-210ENST00000466969 CES5AQ6NT32 575 aa15.09■□□□□ 0.01
UBR4-210ENST00000466969 PLCD3Q8N3E9 789 aa15.09■□□□□ 0.01
UBR4-210ENST00000466969 TDRD5Q8NAT2 981 aaKnown RBP15.09■□□□□ 0.01
UBR4-210ENST00000466969 BORCS6Q96GS4 357 aa15.09■□□□□ 0.01
UBR4-210ENST00000466969 ZMIZ1Q9ULJ6 1067 aa15.09■□□□□ 0.01
UBR4-210ENST00000466969 TBC1D8BQ0IIM8 1120 aa15.08■□□□□ 0
UBR4-210ENST00000466969 IKQ13123 557 aaPredicted RBP15.08■□□□□ 0
UBR4-210ENST00000466969 SYCE2Q6PIF2 218 aa15.08■□□□□ 0
UBR4-210ENST00000466969 TMEM184AQ6ZMB5 413 aa15.08■□□□□ 0
UBR4-210ENST00000466969 C16orf86Q6ZW13 317 aa15.08■□□□□ 0
UBR4-210ENST00000466969 ZDHHC14Q8IZN3 488 aa15.08■□□□□ 0
UBR4-210ENST00000466969 POMKQ9H5K3 350 aa15.08■□□□□ 0
UBR4-210ENST00000466969 RC3H2Q9HBD1 1191 aaKnown RBP15.08■□□□□ 0
UBR4-210ENST00000466969 NYAP2Q9P242 653 aa15.08■□□□□ 0
UBR4-210ENST00000466969 SALL2Q9Y467 1007 aaPredicted RBP15.08■□□□□ 0
UBR4-210ENST00000466969 ZZEF1O43149 2961 aa15.08■□□□□ 0
UBR4-210ENST00000466969 FRYQ5TBA9 3013 aa15.08■□□□□ 0
UBR4-210ENST00000466969 MFSD10Q14728 455 aa15.07■□□□□ 0
UBR4-210ENST00000466969 DGKDQ16760 1214 aa15.07■□□□□ 0
UBR4-210ENST00000466969 KIAA0753Q2KHM9 967 aa15.07■□□□□ 0
UBR4-210ENST00000466969 LRSAM1Q6UWE0 723 aa15.07■□□□□ 0
UBR4-210ENST00000466969 C1orf210Q8IVY1 113 aa15.07■□□□□ 0
UBR4-210ENST00000466969 RPAP2Q8IXW5 612 aaPredicted RBP15.07■□□□□ 0
UBR4-210ENST00000466969 ZNF689Q96CS4 500 aaPredicted RBP15.07■□□□□ 0
UBR4-210ENST00000466969 UNC79Q9P2D8 2635 aa15.06■□□□□ 0
UBR4-210ENST00000466969 SLC30A4O14863 429 aa15.06■□□□□ 0
UBR4-210ENST00000466969 SPTLC1O15269 473 aa15.06■□□□□ 0
UBR4-210ENST00000466969 PPFIA3O75145 1194 aa15.06■□□□□ 0
UBR4-210ENST00000466969 STAT2P52630 851 aa15.06■□□□□ 0
UBR4-210ENST00000466969 SHC2P98077 582 aa15.06■□□□□ 0
UBR4-210ENST00000466969 BAATQ14032 418 aaPredicted RBP15.06■□□□□ 0
UBR4-210ENST00000466969 TPRNQ4KMQ1 711 aa15.06■□□□□ 0
UBR4-210ENST00000466969 TNNI3KQ59H18 835 aa15.06■□□□□ 0
UBR4-210ENST00000466969 SPECC1Q5M775 1068 aa15.06■□□□□ 0
UBR4-210ENST00000466969 C12orf60Q5U649 245 aa15.06■□□□□ 0
UBR4-210ENST00000466969 NETO1Q8TDF5 533 aa15.06■□□□□ 0
UBR4-210ENST00000466969 CLIP2Q9UDT6 1046 aa15.06■□□□□ 0
UBR4-210ENST00000466969 MRPL42Q9Y6G3 142 aaKnown RBP15.06■□□□□ 0
UBR4-210ENST00000466969 FPGT-TNNI3KV9GXZ4 949 aa15.06■□□□□ 0
UBR4-210ENST00000466969 TMEM232C9JQI7 657 aa15.05■□□□□ -0
UBR4-210ENST00000466969 GH1P01241 217 aa15.05■□□□□ -0
UBR4-210ENST00000466969 CTSHP09668 335 aa15.05■□□□□ -0
UBR4-210ENST00000466969 BMP3P12645 472 aa15.05■□□□□ -0
UBR4-210ENST00000466969 PMLP29590 882 aa15.05■□□□□ -0
UBR4-210ENST00000466969 LLGL2Q6P1M3 1020 aa15.05■□□□□ -0
UBR4-210ENST00000466969 CHST3Q7LGC8 479 aa15.05■□□□□ -0
UBR4-210ENST00000466969 SERINC5Q86VE9 423 aa15.05■□□□□ -0
UBR4-210ENST00000466969 CHURC1Q8WUH1 139 aa15.05■□□□□ -0
UBR4-210ENST00000466969 GNL3Q9BVP2 549 aaKnown RBP eCLIP15.05■□□□□ -0
UBR4-210ENST00000466969 LCTP09848 1927 aa15.04■□□□□ -0
UBR4-210ENST00000466969 CYP2D7A0A087X1C5 515 aa15.04■□□□□ -0
UBR4-210ENST00000466969 UBE3AQ05086 875 aa15.04■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms