RNA–Protein interactions for RNA: ENST00000466781.5

HPS4-209, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 1 (best)

Gene HPS4, Length 6,136 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-209ENST00000466781 GUCY2FP51841 1108 aa9.47□□□□□ -0.89
HPS4-209ENST00000466781 BPIFB4P59827 614 aa9.47□□□□□ -0.89
HPS4-209ENST00000466781 STX1BP61266 288 aa9.47□□□□□ -0.89
HPS4-209ENST00000466781 PTK2Q05397 1052 aa9.47□□□□□ -0.89
HPS4-209ENST00000466781 GPKOWQ92917 476 aaPredicted RBP eCLIP9.47□□□□□ -0.89
HPS4-209ENST00000466781 USP44Q9H0E7 712 aa9.47□□□□□ -0.89
HPS4-209ENST00000466781 FRMD4AQ9P2Q2 1039 aaPredicted RBP9.47□□□□□ -0.89
HPS4-209ENST00000466781 ITSN1Q15811 1721 aa9.47□□□□□ -0.89
HPS4-209ENST00000466781 MYO3BQ8WXR4 1341 aa9.47□□□□□ -0.89
HPS4-209ENST00000466781 A0A0D9SFI3 127 aa9.47□□□□□ -0.89
HPS4-209ENST00000466781 ECE2O60344 883 aa9.47□□□□□ -0.89
HPS4-209ENST00000466781 LARP7Q4G0J3 582 aaKnown RBP eCLIP9.47□□□□□ -0.89
HPS4-209ENST00000466781 LRCH2Q5VUJ6 765 aa9.47□□□□□ -0.89
HPS4-209ENST00000466781 PNMA8AQ86V59 439 aaPredicted RBP9.47□□□□□ -0.89
HPS4-209ENST00000466781 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP9.47□□□□□ -0.89
HPS4-209ENST00000466781 MCUQ8NE86 351 aa9.47□□□□□ -0.89
HPS4-209ENST00000466781 MICAL1Q8TDZ2 1067 aa9.47□□□□□ -0.89
HPS4-209ENST00000466781 KLHL14Q9P2G3 628 aa9.47□□□□□ -0.89
HPS4-209ENST00000466781 SSH2Q76I76 1423 aa9.47□□□□□ -0.89
HPS4-209ENST00000466781 SGK1O00141 431 aa9.47□□□□□ -0.89
HPS4-209ENST00000466781 SGSM2O43147 1006 aa9.47□□□□□ -0.89
HPS4-209ENST00000466781 BUB1O43683 1085 aa9.47□□□□□ -0.89
HPS4-209ENST00000466781 CLCN1P35523 988 aa9.47□□□□□ -0.89
HPS4-209ENST00000466781 POLR2FP61218 127 aaKnown RBP9.47□□□□□ -0.89
HPS4-209ENST00000466781 ASPHQ12797 758 aa9.47□□□□□ -0.89
HPS4-209ENST00000466781 MUM1Q2TAK8 710 aa9.47□□□□□ -0.89
HPS4-209ENST00000466781 EFCAB13Q8IY85 973 aa9.47□□□□□ -0.89
HPS4-209ENST00000466781 TSC1Q92574 1164 aa9.47□□□□□ -0.89
HPS4-209ENST00000466781 ZBED2Q9BTP6 218 aa9.47□□□□□ -0.89
HPS4-209ENST00000466781 SPATA31A5Q5VU36 1347 aa9.47□□□□□ -0.89
HPS4-209ENST00000466781 SPATA31A7Q8IWB4 1347 aa9.47□□□□□ -0.89
HPS4-209ENST00000466781 SCG2P13521 617 aa9.47□□□□□ -0.89
HPS4-209ENST00000466781 ABCD1P33897 745 aa9.47□□□□□ -0.89
HPS4-209ENST00000466781 PHKA1P46020 1223 aa9.47□□□□□ -0.89
HPS4-209ENST00000466781 YWHAGP61981 247 aaKnown RBP eCLIP9.47□□□□□ -0.89
HPS4-209ENST00000466781 PTH1RQ03431 593 aa9.47□□□□□ -0.89
HPS4-209ENST00000466781 ELMOD1Q8N336 334 aa9.47□□□□□ -0.89
HPS4-209ENST00000466781 TRIML1Q8N9V2 468 aa9.47□□□□□ -0.89
HPS4-209ENST00000466781 ZNF148Q9UQR1 794 aa9.47□□□□□ -0.89
HPS4-209ENST00000466781 FAN1Q9Y2M0 1017 aa9.47□□□□□ -0.89
HPS4-209ENST00000466781 HNRNPDLO14979 420 aaKnown RBP9.47□□□□□ -0.89
HPS4-209ENST00000466781 GSTA4O15217 222 aa9.47□□□□□ -0.89
HPS4-209ENST00000466781 MED7O43513 233 aa9.47□□□□□ -0.89
HPS4-209ENST00000466781 KCNQ2O43526 872 aa9.47□□□□□ -0.89
HPS4-209ENST00000466781 JAK2O60674 1132 aa9.47□□□□□ -0.89
HPS4-209ENST00000466781 THOC5Q13769 683 aaKnown RBP9.47□□□□□ -0.89
HPS4-209ENST00000466781 TRIM11Q96F44 468 aa9.47□□□□□ -0.89
HPS4-209ENST00000466781 NT5C1BQ96P26 610 aa9.47□□□□□ -0.89
HPS4-209ENST00000466781 RASSF4Q9H2L5 321 aa9.47□□□□□ -0.89
HPS4-209ENST00000466781 KMT5AQ9NQR1 393 aa9.47□□□□□ -0.89
HPS4-209ENST00000466781 ORC6Q9Y5N6 252 aa9.47□□□□□ -0.89
HPS4-209ENST00000466781 ADAM9Q13443 819 aa9.46□□□□□ -0.89
HPS4-209ENST00000466781 PHLDB3Q6NSJ2 640 aa9.46□□□□□ -0.89
HPS4-209ENST00000466781 RNF217Q8TC41 542 aa9.46□□□□□ -0.89
HPS4-209ENST00000466781 SLC7A3Q8WY07 619 aa9.46□□□□□ -0.89
HPS4-209ENST00000466781 SPDL1Q96EA4 605 aa9.46□□□□□ -0.89
HPS4-209ENST00000466781 ABCF3Q9NUQ8 709 aa9.46□□□□□ -0.89
HPS4-209ENST00000466781 DDX41Q9UJV9 622 aaKnown RBP9.46□□□□□ -0.89
HPS4-209ENST00000466781 SAR1BQ9Y6B6 198 aa9.46□□□□□ -0.89
HPS4-209ENST00000466781 INO80B-WBP1J3KQ70 363 aa9.46□□□□□ -0.89
HPS4-209ENST00000466781 GPC4O75487 556 aa9.46□□□□□ -0.89
HPS4-209ENST00000466781 NFKBIAP25963 317 aa9.46□□□□□ -0.89
HPS4-209ENST00000466781 FAM173BQ6P4H8 233 aa9.46□□□□□ -0.89
HPS4-209ENST00000466781 ZBTB33Q86T24 672 aa9.46□□□□□ -0.89
HPS4-209ENST00000466781 GDAP1Q8TB36 358 aa9.46□□□□□ -0.89
HPS4-209ENST00000466781 RPGRIP1Q96KN7 1286 aa9.46□□□□□ -0.89
HPS4-209ENST00000466781 INO80BQ9C086 356 aaPredicted RBP9.46□□□□□ -0.89
HPS4-209ENST00000466781 NEXMIFQ5QGS0 1516 aa9.46□□□□□ -0.9
HPS4-209ENST00000466781 BAG2O95816 211 aa9.46□□□□□ -0.9
HPS4-209ENST00000466781 MYCP01106 439 aaPredicted RBP9.46□□□□□ -0.9
HPS4-209ENST00000466781 ACTN1P12814 892 aa9.46□□□□□ -0.9
HPS4-209ENST00000466781 LMNB2Q03252 620 aa9.46□□□□□ -0.9
HPS4-209ENST00000466781 SLC12A1Q13621 1099 aa9.46□□□□□ -0.9
HPS4-209ENST00000466781 WHAMMQ8TF30 809 aa9.46□□□□□ -0.9
HPS4-209ENST00000466781 ACCSQ96QU6 501 aa9.46□□□□□ -0.9
HPS4-209ENST00000466781 HOMER3Q9NSC5 361 aa9.46□□□□□ -0.9
HPS4-209ENST00000466781 FNDC3AQ9Y2H6 1198 aaKnown RBP9.46□□□□□ -0.9
HPS4-209ENST00000466781 PASKQ96RG2 1323 aa9.46□□□□□ -0.9
HPS4-209ENST00000466781 PLEKHG2Q9H7P9 1386 aa9.46□□□□□ -0.9
HPS4-209ENST00000466781 INHBAP08476 426 aa9.46□□□□□ -0.9
HPS4-209ENST00000466781 EPHB1P54762 984 aa9.46□□□□□ -0.9
HPS4-209ENST00000466781 DYNLL1P63167 89 aaKnown RBP9.46□□□□□ -0.9
HPS4-209ENST00000466781 ODR4Q5SWX8 454 aa9.46□□□□□ -0.9
HPS4-209ENST00000466781 NOSTRINQ8IVI9 506 aa9.46□□□□□ -0.9
HPS4-209ENST00000466781 PCDHA1Q9Y5I3 950 aa9.46□□□□□ -0.9
HPS4-209ENST00000466781 GNGT2O14610 69 aa9.45□□□□□ -0.9
HPS4-209ENST00000466781 RPN1P04843 607 aaKnown RBP9.45□□□□□ -0.9
HPS4-209ENST00000466781 MYL3P08590 195 aa9.45□□□□□ -0.9
HPS4-209ENST00000466781 CYP19A1P11511 503 aaPredicted RBP9.45□□□□□ -0.9
HPS4-209ENST00000466781 ASPRV1Q53RT3 343 aa9.45□□□□□ -0.9
HPS4-209ENST00000466781 FAM149B1Q96BN6 582 aa9.45□□□□□ -0.9
HPS4-209ENST00000466781 TNKSO95271 1327 aa9.45□□□□□ -0.9
HPS4-209ENST00000466781 SETD1BQ9UPS6 1966 aaKnown RBP9.45□□□□□ -0.9
HPS4-209ENST00000466781 GOLGA8KD6RF30 607 aa9.45□□□□□ -0.9
HPS4-209ENST00000466781 PHEXP78562 749 aa9.45□□□□□ -0.9
HPS4-209ENST00000466781 PDE1BQ01064 536 aa9.45□□□□□ -0.9
HPS4-209ENST00000466781 MYO1EQ12965 1108 aa9.45□□□□□ -0.9
HPS4-209ENST00000466781 HLFQ16534 295 aa9.45□□□□□ -0.9
HPS4-209ENST00000466781 NDUFAF2Q8N183 169 aa9.45□□□□□ -0.9
HPS4-209ENST00000466781 PRPF38AQ8NAV1 312 aaKnown RBP9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms