RNA–Protein interactions for RNA: ENST00000466618.1

SNED1-208, Transcript of sushi, nidogen and EGF like domains 1, humanhuman

TSL 5

Gene SNED1, Length 2,198 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1-208ENST00000466618 LZTFL1Q9NQ48 299 aa17.2■□□□□ 0.34
SNED1-208ENST00000466618 SOWAHDA6NJG2 315 aa17.19■□□□□ 0.34
SNED1-208ENST00000466618 CCDC175P0C221 793 aa17.19■□□□□ 0.34
SNED1-208ENST00000466618 HOXA7P31268 230 aaPredicted RBP17.19■□□□□ 0.34
SNED1-208ENST00000466618 HSP90AA4PQ58FG1 418 aa17.19■□□□□ 0.34
SNED1-208ENST00000466618 CATSPERGQ6ZRH7 1159 aa17.19■□□□□ 0.34
SNED1-208ENST00000466618 BRI3BPQ8WY22 251 aa17.19■□□□□ 0.34
SNED1-208ENST00000466618 SPZ1Q9BXG8 430 aa17.19■□□□□ 0.34
SNED1-208ENST00000466618 UBA5Q9GZZ9 404 aa17.19■□□□□ 0.34
SNED1-208ENST00000466618 CPVLQ9H3G5 476 aa17.19■□□□□ 0.34
SNED1-208ENST00000466618 RIOX1Q9H6W3 641 aa17.19■□□□□ 0.34
SNED1-208ENST00000466618 AGTPBP1Q9UPW5 1226 aa17.19■□□□□ 0.34
SNED1-208ENST00000466618 CCDC172P0C7W6 258 aa17.19■□□□□ 0.34
SNED1-208ENST00000466618 BMP6P22004 513 aa17.19■□□□□ 0.34
SNED1-208ENST00000466618 AARSP49588 968 aaKnown RBP eCLIP17.19■□□□□ 0.34
SNED1-208ENST00000466618 DEFB115Q30KQ5 88 aa17.19■□□□□ 0.34
SNED1-208ENST00000466618 AFAP1L1Q8TED9 768 aa17.19■□□□□ 0.34
SNED1-208ENST00000466618 CLIC6Q96NY7 704 aa17.19■□□□□ 0.34
SNED1-208ENST00000466618 GBP3Q9H0R5 595 aa17.19■□□□□ 0.34
SNED1-208ENST00000466618 FEM1BQ9UK73 627 aa17.19■□□□□ 0.34
SNED1-208ENST00000466618 ADGRG1Q9Y653 693 aa17.19■□□□□ 0.34
SNED1-208ENST00000466618 SLC16A2P36021 539 aa17.18■□□□□ 0.34
SNED1-208ENST00000466618 STAT2P52630 851 aa17.18■□□□□ 0.34
SNED1-208ENST00000466618 TUBB4BP68371 445 aa17.18■□□□□ 0.34
SNED1-208ENST00000466618 CYP4F22Q6NT55 531 aa17.18■□□□□ 0.34
SNED1-208ENST00000466618 RAD9BQ6WBX8 426 aa17.18■□□□□ 0.34
SNED1-208ENST00000466618 GADL1Q6ZQY3 521 aa17.18■□□□□ 0.34
SNED1-208ENST00000466618 BRAPQ7Z569 592 aa17.18■□□□□ 0.34
SNED1-208ENST00000466618 PTPN18Q99952 460 aa17.18■□□□□ 0.34
SNED1-208ENST00000466618 FBXO28Q9NVF7 368 aa17.18■□□□□ 0.34
SNED1-208ENST00000466618 LOC285556D6RIA3 1793 aa17.18■□□□□ 0.34
SNED1-208ENST00000466618 CNTNAP5Q8WYK1 1306 aa17.18■□□□□ 0.34
SNED1-208ENST00000466618 CCL15-CCL14A0A0B4J2E2 113 aa17.18■□□□□ 0.34
SNED1-208ENST00000466618 USP17L15C9J2P7 530 aa17.18■□□□□ 0.34
SNED1-208ENST00000466618 USP17L13C9JLJ4 530 aa17.18■□□□□ 0.34
SNED1-208ENST00000466618 USP17L11C9JVI0 530 aa17.18■□□□□ 0.34
SNED1-208ENST00000466618 USP17L18D6R9N7 530 aa17.18■□□□□ 0.34
SNED1-208ENST00000466618 USP17L22D6RA61 530 aa17.18■□□□□ 0.34
SNED1-208ENST00000466618 USP17L17D6RBQ6 530 aa17.18■□□□□ 0.34
SNED1-208ENST00000466618 USP17L19D6RCP7 530 aa17.18■□□□□ 0.34
SNED1-208ENST00000466618 USP17L20D6RJB6 530 aa17.18■□□□□ 0.34
SNED1-208ENST00000466618 CPLX1O14810 134 aa17.18■□□□□ 0.34
SNED1-208ENST00000466618 ZNF18P17022 549 aa17.18■□□□□ 0.34
SNED1-208ENST00000466618 MARCKSP29966 332 aaPredicted RBP17.18■□□□□ 0.34
SNED1-208ENST00000466618 USP17L24Q0WX57 530 aa17.18■□□□□ 0.34
SNED1-208ENST00000466618 CCL15Q16663 113 aa17.18■□□□□ 0.34
SNED1-208ENST00000466618 FAM160B2Q86V87 743 aa17.18■□□□□ 0.34
SNED1-208ENST00000466618 MTMR8Q96EF0 704 aa17.18■□□□□ 0.34
SNED1-208ENST00000466618 C8orf76Q96K31 380 aa17.18■□□□□ 0.34
SNED1-208ENST00000466618 CEP83Q9Y592 693 aa17.18■□□□□ 0.34
SNED1-208ENST00000466618 PTPRFP10586 1907 aa17.17■□□□□ 0.34
SNED1-208ENST00000466618 MANSC4A6NHS7 340 aaPredicted RBP17.17■□□□□ 0.34
SNED1-208ENST00000466618 TUBB2AQ13885 445 aa17.17■□□□□ 0.34
SNED1-208ENST00000466618 KCNV1Q6PIU1 500 aa17.17■□□□□ 0.34
SNED1-208ENST00000466618 SHC4Q6S5L8 630 aa17.17■□□□□ 0.34
SNED1-208ENST00000466618 ADGRF4Q8IZF3 695 aa17.17■□□□□ 0.34
SNED1-208ENST00000466618 CCDC82Q8N4S0 544 aa17.17■□□□□ 0.34
SNED1-208ENST00000466618 CHURC1Q8WUH1 139 aa17.17■□□□□ 0.34
SNED1-208ENST00000466618 TUBB2BQ9BVA1 445 aa17.17■□□□□ 0.34
SNED1-208ENST00000466618 ACBD3Q9H3P7 528 aa17.17■□□□□ 0.34
SNED1-208ENST00000466618 JMJD4Q9H9V9 463 aa17.17■□□□□ 0.34
SNED1-208ENST00000466618 GJB4Q9NTQ9 266 aa17.17■□□□□ 0.34
SNED1-208ENST00000466618 FAM237AA0A1B0GTK4 181 aa17.16■□□□□ 0.34
SNED1-208ENST00000466618 KIF5CO60282 957 aa17.16■□□□□ 0.34
SNED1-208ENST00000466618 SLC39A14Q15043 492 aa17.16■□□□□ 0.34
SNED1-208ENST00000466618 CPLX2Q6PUV4 134 aaKnown RBP17.16■□□□□ 0.34
SNED1-208ENST00000466618 ANKRD23Q86SG2 305 aa17.16■□□□□ 0.34
SNED1-208ENST00000466618 NOA1Q8NC60 698 aaKnown RBP17.16■□□□□ 0.34
SNED1-208ENST00000466618 PHKBQ93100 1093 aa17.16■□□□□ 0.34
SNED1-208ENST00000466618 TANGO6Q9C0B7 1094 aa17.16■□□□□ 0.34
SNED1-208ENST00000466618 VIPAS39Q9H9C1 493 aa17.16■□□□□ 0.34
SNED1-208ENST00000466618 PPP1R9AQ9ULJ8 1098 aa17.16■□□□□ 0.34
SNED1-208ENST00000466618 PRR12Q9ULL5 1215 aa17.16■□□□□ 0.34
SNED1-208ENST00000466618 ADAMTS5Q9UNA0 930 aa17.16■□□□□ 0.34
SNED1-208ENST00000466618 SLC45A1Q9Y2W3 748 aa17.16■□□□□ 0.34
SNED1-208ENST00000466618 BTBD19C9JJ37 291 aa17.16■□□□□ 0.34
SNED1-208ENST00000466618 CLGNO14967 610 aa17.16■□□□□ 0.34
SNED1-208ENST00000466618 CDKL5O76039 1030 aa17.16■□□□□ 0.34
SNED1-208ENST00000466618 ERLIN2O94905 339 aa17.16■□□□□ 0.34
SNED1-208ENST00000466618 FMNL1O95466 1100 aaPredicted RBP17.16■□□□□ 0.34
SNED1-208ENST00000466618 MYCNP04198 464 aaPredicted RBP17.16■□□□□ 0.34
SNED1-208ENST00000466618 KIF23Q02241 960 aaPredicted RBP17.16■□□□□ 0.34
SNED1-208ENST00000466618 ZNF569Q5MCW4 686 aa17.16■□□□□ 0.34
SNED1-208ENST00000466618 SYDE2Q5VT97 1194 aa17.16■□□□□ 0.34
SNED1-208ENST00000466618 PRPF38AQ8NAV1 312 aaKnown RBP17.16■□□□□ 0.34
SNED1-208ENST00000466618 ZIC5Q96T25 663 aa17.16■□□□□ 0.34
SNED1-208ENST00000466618 SLF1Q9BQI6 1058 aa17.16■□□□□ 0.34
SNED1-208ENST00000466618 RNF26Q9BY78 433 aaPredicted RBP17.16■□□□□ 0.34
SNED1-208ENST00000466618 MYPNQ86TC9 1320 aa17.15■□□□□ 0.34
SNED1-208ENST00000466618 PRPF3O43395 683 aaKnown RBP17.15■□□□□ 0.34
SNED1-208ENST00000466618 SHOX2O60902 331 aaPredicted RBP17.15■□□□□ 0.34
SNED1-208ENST00000466618 INHBEP58166 350 aa17.15■□□□□ 0.34
SNED1-208ENST00000466618 C1QTNF8P60827 252 aa17.15■□□□□ 0.34
SNED1-208ENST00000466618 COG2Q14746 738 aa17.15■□□□□ 0.34
SNED1-208ENST00000466618 WDR93Q6P2C0 686 aa17.15■□□□□ 0.34
SNED1-208ENST00000466618 SLC35F6Q8N357 371 aa17.15■□□□□ 0.34
SNED1-208ENST00000466618 CAPNS2Q96L46 248 aa17.15■□□□□ 0.34
SNED1-208ENST00000466618 PANX2Q96RD6 677 aa17.15■□□□□ 0.34
SNED1-208ENST00000466618 PCDHA5Q9Y5H7 936 aa17.15■□□□□ 0.34
SNED1-208ENST00000466618 STK36Q9NRP7 1315 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms