RNA–Protein interactions for RNA: ENST00000462236.1

COPS3-204, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5

Gene COPS3, Length 551 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-204ENST00000462236 HTRA3P83110 453 aa6.68□□□□□ -1.34
COPS3-204ENST00000462236 BMS1Q14692 1282 aaKnown RBP6.68□□□□□ -1.34
COPS3-204ENST00000462236 DCAF15Q66K64 600 aa6.68□□□□□ -1.34
COPS3-204ENST00000462236 POMZP3Q6PJE2 187 aa6.68□□□□□ -1.34
COPS3-204ENST00000462236 TMPRSS7Q7RTY8 843 aa6.68□□□□□ -1.34
COPS3-204ENST00000462236 STK11IPQ8N1F8 1099 aa6.68□□□□□ -1.34
COPS3-204ENST00000462236 ZNF655Q8N720 491 aaPredicted RBP6.68□□□□□ -1.34
COPS3-204ENST00000462236 VAV3Q9UKW4 847 aa6.68□□□□□ -1.34
COPS3-204ENST00000462236 ZNF451Q9Y4E5 1061 aa6.68□□□□□ -1.34
COPS3-204ENST00000462236 KIF20BQ96Q89 1820 aa6.68□□□□□ -1.34
COPS3-204ENST00000462236 FER1L6Q2WGJ9 1857 aa6.68□□□□□ -1.34
COPS3-204ENST00000462236 PALLDQ8WX93 1383 aa6.68□□□□□ -1.34
COPS3-204ENST00000462236 NCAPD2Q15021 1401 aa6.67□□□□□ -1.34
COPS3-204ENST00000462236 NRXN2Q9P2S2 1712 aa6.67□□□□□ -1.34
COPS3-204ENST00000462236 PRKCQQ04759 706 aa6.67□□□□□ -1.34
COPS3-204ENST00000462236 GRB10Q13322 594 aa6.67□□□□□ -1.34
COPS3-204ENST00000462236 LONRF2Q1L5Z9 754 aa6.67□□□□□ -1.34
COPS3-204ENST00000462236 SLC10A6Q3KNW5 377 aa6.67□□□□□ -1.34
COPS3-204ENST00000462236 MTERF2Q49AM1 385 aa6.67□□□□□ -1.34
COPS3-204ENST00000462236 ZC3H12BQ5HYM0 836 aaKnown RBP6.67□□□□□ -1.34
COPS3-204ENST00000462236 NOL9Q5SY16 702 aaKnown RBP6.67□□□□□ -1.34
COPS3-204ENST00000462236 TSPYL5Q86VY4 417 aaPredicted RBP6.67□□□□□ -1.34
COPS3-204ENST00000462236 LRRC47Q8N1G4 583 aaKnown RBP6.67□□□□□ -1.34
COPS3-204ENST00000462236 ARHGEF39Q8N4T4 335 aa6.67□□□□□ -1.34
COPS3-204ENST00000462236 ZNF513Q8N8E2 541 aaPredicted RBP6.67□□□□□ -1.34
COPS3-204ENST00000462236 FAM181AQ8N9Y4 354 aa6.67□□□□□ -1.34
COPS3-204ENST00000462236 ASB11Q8WXH4 323 aa6.67□□□□□ -1.34
COPS3-204ENST00000462236 SYTL4Q96C24 671 aaPredicted RBP6.67□□□□□ -1.34
COPS3-204ENST00000462236 DUSP15Q9H1R2 295 aaPredicted RBP6.67□□□□□ -1.34
COPS3-204ENST00000462236 CHST7Q9NS84 486 aa6.67□□□□□ -1.34
COPS3-204ENST00000462236 ZC3H7BQ9UGR2 993 aaKnown RBP6.67□□□□□ -1.34
COPS3-204ENST00000462236 PLAGL2Q9UPG8 496 aa6.67□□□□□ -1.34
COPS3-204ENST00000462236 SF3B6Q9Y3B4 125 aaKnown RBP6.67□□□□□ -1.34
COPS3-204ENST00000462236 CGNL1Q0VF96 1302 aa6.67□□□□□ -1.34
COPS3-204ENST00000462236 PLEKHG2Q9H7P9 1386 aa6.67□□□□□ -1.34
COPS3-204ENST00000462236 KCPQ6ZWJ8 1503 aa6.66□□□□□ -1.34
COPS3-204ENST00000462236 FAM221BA6H8Z2 402 aa6.66□□□□□ -1.34
COPS3-204ENST00000462236 GSNP06396 782 aa6.66□□□□□ -1.34
COPS3-204ENST00000462236 ITIH2P19823 946 aa6.66□□□□□ -1.34
COPS3-204ENST00000462236 ENDOUP21128 410 aaKnown RBP6.66□□□□□ -1.34
COPS3-204ENST00000462236 HOXC9P31274 260 aa6.66□□□□□ -1.34
COPS3-204ENST00000462236 ZNF445P59923 1031 aa6.66□□□□□ -1.34
COPS3-204ENST00000462236 TGFB2P61812 414 aa6.66□□□□□ -1.34
COPS3-204ENST00000462236 MSMPQ1L6U9 139 aa6.66□□□□□ -1.34
COPS3-204ENST00000462236 CLEC16AQ2KHT3 1053 aa6.66□□□□□ -1.34
COPS3-204ENST00000462236 ADAT2Q7Z6V5 191 aaKnown RBP6.66□□□□□ -1.34
COPS3-204ENST00000462236 SUGP2Q8IX01 1082 aaKnown RBP eCLIP6.66□□□□□ -1.34
COPS3-204ENST00000462236 HRASLS5Q96KN8 279 aa6.66□□□□□ -1.34
COPS3-204ENST00000462236 HDAC8Q9BY41 377 aa6.66□□□□□ -1.34
COPS3-204ENST00000462236 PIF1Q9H611 641 aa6.66□□□□□ -1.34
COPS3-204ENST00000462236 BSDC1Q9NW68 430 aaPredicted RBP6.66□□□□□ -1.34
COPS3-204ENST00000462236 MAP3K19Q56UN5 1328 aa6.66□□□□□ -1.34
COPS3-204ENST00000462236 A0A1W2PP64 1363 aa6.66□□□□□ -1.34
COPS3-204ENST00000462236 RTL1A6NKG5 1358 aa6.66□□□□□ -1.34
COPS3-204ENST00000462236 KDM6AO15550 1401 aaPredicted RBP6.66□□□□□ -1.34
COPS3-204ENST00000462236 NOP56O00567 594 aaKnown RBP6.65□□□□□ -1.34
COPS3-204ENST00000462236 PRAMEF1O95521 474 aa6.65□□□□□ -1.34
COPS3-204ENST00000462236 TGFB1P01137 390 aa6.65□□□□□ -1.34
COPS3-204ENST00000462236 PRNPP04156 253 aa6.65□□□□□ -1.34
COPS3-204ENST00000462236 KCNA3P22001 575 aa6.65□□□□□ -1.34
COPS3-204ENST00000462236 GAB4Q2WGN9 574 aa6.65□□□□□ -1.34
COPS3-204ENST00000462236 SV2CQ496J9 727 aa6.65□□□□□ -1.34
COPS3-204ENST00000462236 SMIM5Q71RC9 77 aa6.65□□□□□ -1.34
COPS3-204ENST00000462236 PLD6Q8N2A8 252 aaKnown RBP6.65□□□□□ -1.34
COPS3-204ENST00000462236 BVESQ8NE79 360 aa6.65□□□□□ -1.34
COPS3-204ENST00000462236 HSPA12BQ96MM6 686 aa6.65□□□□□ -1.34
COPS3-204ENST00000462236 SEMA3GQ9NS98 782 aa6.65□□□□□ -1.34
COPS3-204ENST00000462236 ZMYM5Q9UJ78 669 aa6.65□□□□□ -1.34
COPS3-204ENST00000462236 EMC9Q9Y3B6 208 aa6.65□□□□□ -1.34
COPS3-204ENST00000462236 U3KQE9 123 aa6.65□□□□□ -1.34
COPS3-204ENST00000462236 PITPNM2Q9BZ72 1349 aa6.65□□□□□ -1.35
COPS3-204ENST00000462236 CYP27B1O15528 508 aa6.64□□□□□ -1.35
COPS3-204ENST00000462236 HSPA1AP0DMV8 641 aaKnown RBP6.64□□□□□ -1.35
COPS3-204ENST00000462236 HSPA1BP0DMV9 641 aaKnown RBP6.64□□□□□ -1.35
COPS3-204ENST00000462236 SNW1Q13573 536 aaKnown RBP6.64□□□□□ -1.35
COPS3-204ENST00000462236 CDKAL1Q5VV42 579 aa6.64□□□□□ -1.35
COPS3-204ENST00000462236 TMC3Q7Z5M5 1100 aa6.64□□□□□ -1.35
COPS3-204ENST00000462236 FIBCD1Q8N539 461 aa6.64□□□□□ -1.35
COPS3-204ENST00000462236 LINC00116Q8NCU8 138 aa6.64□□□□□ -1.35
COPS3-204ENST00000462236 THAP3Q8WTV1 239 aaPredicted RBP6.64□□□□□ -1.35
COPS3-204ENST00000462236 PUS7Q96PZ0 661 aaKnown RBP6.64□□□□□ -1.35
COPS3-204ENST00000462236 DSCC1Q9BVC3 393 aa6.64□□□□□ -1.35
COPS3-204ENST00000462236 FAM86C1Q9NVL1 165 aa6.64□□□□□ -1.35
COPS3-204ENST00000462236 GFOD1Q9NXC2 390 aa6.64□□□□□ -1.35
COPS3-204ENST00000462236 SUGT1Q9Y2Z0 365 aa6.64□□□□□ -1.35
COPS3-204ENST00000462236 CACNA1SQ13698 1873 aa6.64□□□□□ -1.35
COPS3-204ENST00000462236 ANKRD31Q8N7Z5 1873 aa6.64□□□□□ -1.35
COPS3-204ENST00000462236 TLDC2A0PJX2 215 aa6.63□□□□□ -1.35
COPS3-204ENST00000462236 CCDC85CA6NKD9 419 aa6.63□□□□□ -1.35
COPS3-204ENST00000462236 KIAA1324LA8MWY0 1029 aaPredicted RBP6.63□□□□□ -1.35
COPS3-204ENST00000462236 FBLN1P23142 703 aa6.63□□□□□ -1.35
COPS3-204ENST00000462236 BMP8BP34820 402 aa6.63□□□□□ -1.35
COPS3-204ENST00000462236 SCN4AP35499 1836 aa6.63□□□□□ -1.35
COPS3-204ENST00000462236 KDRP35968 1356 aa6.63□□□□□ -1.35
COPS3-204ENST00000462236 NOP2P46087 812 aaKnown RBP6.63□□□□□ -1.35
COPS3-204ENST00000462236 RBM10P98175 930 aaKnown RBP6.63□□□□□ -1.35
COPS3-204ENST00000462236 TJP1Q07157 1748 aa6.63□□□□□ -1.35
COPS3-204ENST00000462236 SSRP1Q08945 709 aaKnown RBP6.63□□□□□ -1.35
COPS3-204ENST00000462236 HSP90AA2PQ14568 343 aaPredicted RBP6.63□□□□□ -1.35
COPS3-204ENST00000462236 CWF19L1Q69YN2 538 aaKnown RBP6.63□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms