RNA–Protein interactions for RNA: ENST00000457642.1

HMGN1P18-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 18, humanhuman

BASIC

Gene HMGN1P18, Length 277 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P18-201ENST00000457642 BCAS4Q8TDM0 211 aa3.67□□□□□ -1.82
HMGN1P18-201ENST00000457642 SH3RF3Q8TEJ3 882 aaPredicted RBP3.67□□□□□ -1.82
HMGN1P18-201ENST00000457642 RPGRQ92834 1020 aaKnown RBP3.67□□□□□ -1.82
HMGN1P18-201ENST00000457642 CELF1Q92879 486 aaKnown RBP3.67□□□□□ -1.82
HMGN1P18-201ENST00000457642 DYNLL2Q96FJ2 89 aa3.67□□□□□ -1.82
HMGN1P18-201ENST00000457642 PBKQ96KB5 322 aa3.67□□□□□ -1.82
HMGN1P18-201ENST00000457642 SPAG5Q96R06 1193 aa3.67□□□□□ -1.82
HMGN1P18-201ENST00000457642 NAP1L3Q99457 506 aaPredicted RBP3.67□□□□□ -1.82
HMGN1P18-201ENST00000457642 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP3.67□□□□□ -1.82
HMGN1P18-201ENST00000457642 MXD3Q9BW11 206 aa3.67□□□□□ -1.82
HMGN1P18-201ENST00000457642 LACRTQ9GZZ8 138 aa3.67□□□□□ -1.82
HMGN1P18-201ENST00000457642 SEMA6BQ9H3T3 888 aa3.67□□□□□ -1.82
HMGN1P18-201ENST00000457642 SUGCTQ9HAC7 445 aa3.67□□□□□ -1.82
HMGN1P18-201ENST00000457642 MLXIPQ9HAP2 919 aa3.67□□□□□ -1.82
HMGN1P18-201ENST00000457642 PANK4Q9NVE7 773 aa3.67□□□□□ -1.82
HMGN1P18-201ENST00000457642 TMEM51Q9NW97 253 aa3.67□□□□□ -1.82
HMGN1P18-201ENST00000457642 BIN2Q9UBW5 565 aaPredicted RBP3.67□□□□□ -1.82
HMGN1P18-201ENST00000457642 SWAP70Q9UH65 585 aa3.67□□□□□ -1.82
HMGN1P18-201ENST00000457642 DDX25Q9UHL0 483 aaKnown RBP3.67□□□□□ -1.82
HMGN1P18-201ENST00000457642 NARFQ9UHQ1 456 aa3.67□□□□□ -1.82
HMGN1P18-201ENST00000457642 SAP30BPQ9UHR5 308 aaKnown RBP3.67□□□□□ -1.82
HMGN1P18-201ENST00000457642 SIK3Q9Y2K2 1263 aa3.67□□□□□ -1.82
HMGN1P18-201ENST00000457642 ATP6V0A2Q9Y487 856 aa3.67□□□□□ -1.82
HMGN1P18-201ENST00000457642 DAAM1Q9Y4D1 1078 aa3.67□□□□□ -1.82
HMGN1P18-201ENST00000457642 C10orf71Q711Q0 1435 aa3.67□□□□□ -1.82
HMGN1P18-201ENST00000457642 MYO3BQ8WXR4 1341 aa3.67□□□□□ -1.82
HMGN1P18-201ENST00000457642 ZNF335Q9H4Z2 1342 aaPredicted RBP3.67□□□□□ -1.82
HMGN1P18-201ENST00000457642 BAZ2BQ9UIF8 2168 aaKnown RBP3.66□□□□□ -1.82
HMGN1P18-201ENST00000457642 PNMA6FA0A0J9YX94 578 aa3.66□□□□□ -1.82
HMGN1P18-201ENST00000457642 RCCD1A6NED2 376 aa3.66□□□□□ -1.82
HMGN1P18-201ENST00000457642 MYMKA6NI61 221 aa3.66□□□□□ -1.82
HMGN1P18-201ENST00000457642 CCDC188H7C350 402 aa3.66□□□□□ -1.82
HMGN1P18-201ENST00000457642 GCOM1H8Y6P7 765 aaPredicted RBP3.66□□□□□ -1.82
HMGN1P18-201ENST00000457642 PGRMC1O00264 195 aaKnown RBP3.66□□□□□ -1.82
HMGN1P18-201ENST00000457642 TULP1O00294 542 aaPredicted RBP3.66□□□□□ -1.82
HMGN1P18-201ENST00000457642 TRIM66O15016 1216 aa3.66□□□□□ -1.82
HMGN1P18-201ENST00000457642 GNPATO15228 680 aa3.66□□□□□ -1.82
HMGN1P18-201ENST00000457642 ZNF185O15231 689 aa3.66□□□□□ -1.82
HMGN1P18-201ENST00000457642 SLC16A3O15427 465 aaKnown RBP3.66□□□□□ -1.82
HMGN1P18-201ENST00000457642 ZEB2O60315 1214 aa3.66□□□□□ -1.82
HMGN1P18-201ENST00000457642 TBCAO75347 108 aaKnown RBP3.66□□□□□ -1.82
HMGN1P18-201ENST00000457642 RPS6KA4O75676 772 aa3.66□□□□□ -1.82
HMGN1P18-201ENST00000457642 PALMO75781 387 aa3.66□□□□□ -1.82
HMGN1P18-201ENST00000457642 GFPT2O94808 682 aa3.66□□□□□ -1.82
HMGN1P18-201ENST00000457642 UFL1O94874 794 aa3.66□□□□□ -1.82
HMGN1P18-201ENST00000457642 TRIM37O94972 964 aa3.66□□□□□ -1.82
HMGN1P18-201ENST00000457642 CPP00450 1065 aa3.66□□□□□ -1.82
HMGN1P18-201ENST00000457642 ABL1P00519 1130 aa3.66□□□□□ -1.82
HMGN1P18-201ENST00000457642 MYZAPP0CAP1 466 aa3.66□□□□□ -1.82
HMGN1P18-201ENST00000457642 GOLGA8HP0CJ92 632 aa3.66□□□□□ -1.82
HMGN1P18-201ENST00000457642 NR1D1P20393 614 aa3.66□□□□□ -1.82
HMGN1P18-201ENST00000457642 RPL13P26373 211 aaKnown RBP3.66□□□□□ -1.82
HMGN1P18-201ENST00000457642 SLC1A4P43007 532 aa3.66□□□□□ -1.82
HMGN1P18-201ENST00000457642 CCT5P48643 541 aa3.66□□□□□ -1.82
HMGN1P18-201ENST00000457642 KLK7P49862 253 aa3.66□□□□□ -1.82
HMGN1P18-201ENST00000457642 IRAK1P51617 712 aa3.66□□□□□ -1.82
HMGN1P18-201ENST00000457642 GTF2A1P52655 376 aaPredicted RBP3.66□□□□□ -1.82
HMGN1P18-201ENST00000457642 POLR2FP61218 127 aaKnown RBP3.66□□□□□ -1.82
HMGN1P18-201ENST00000457642 GUCY2DQ02846 1103 aa3.66□□□□□ -1.82
HMGN1P18-201ENST00000457642 TRAF1Q13077 416 aa3.66□□□□□ -1.82
HMGN1P18-201ENST00000457642 DRP2Q13474 957 aa3.66□□□□□ -1.82
HMGN1P18-201ENST00000457642 BIRC3Q13489 604 aa3.66□□□□□ -1.82
HMGN1P18-201ENST00000457642 HLTFQ14527 1009 aaKnown RBP eCLIP3.66□□□□□ -1.82
HMGN1P18-201ENST00000457642 NAB2Q15742 525 aa3.66□□□□□ -1.82
HMGN1P18-201ENST00000457642 SLC18A3Q16572 532 aa3.66□□□□□ -1.82
HMGN1P18-201ENST00000457642 SLC4A8Q2Y0W8 1093 aa3.66□□□□□ -1.82
HMGN1P18-201ENST00000457642 EDRF1Q3B7T1 1238 aa3.66□□□□□ -1.82
HMGN1P18-201ENST00000457642 HERC4Q5GLZ8 1057 aaPredicted RBP3.66□□□□□ -1.82
HMGN1P18-201ENST00000457642 FAM83BQ5T0W9 1011 aa3.66□□□□□ -1.82
HMGN1P18-201ENST00000457642 GPATCH4Q5T3I0 446 aaKnown RBP3.66□□□□□ -1.82
HMGN1P18-201ENST00000457642 ICE2Q659A1 982 aa3.66□□□□□ -1.82
HMGN1P18-201ENST00000457642 TBC1D9BQ66K14 1250 aa3.66□□□□□ -1.82
HMGN1P18-201ENST00000457642 KDM7AQ6ZMT4 941 aa3.66□□□□□ -1.82
HMGN1P18-201ENST00000457642 MMS22LQ6ZRQ5 1243 aa3.66□□□□□ -1.82
HMGN1P18-201ENST00000457642 C15orf52Q6ZUT6 534 aaKnown RBP3.66□□□□□ -1.82
HMGN1P18-201ENST00000457642 STXBP4Q6ZWJ1 553 aa3.66□□□□□ -1.82
HMGN1P18-201ENST00000457642 ARMC9Q7Z3E5 817 aa3.66□□□□□ -1.82
HMGN1P18-201ENST00000457642 KRT26Q7Z3Y9 468 aa3.66□□□□□ -1.82
HMGN1P18-201ENST00000457642 TMC4Q7Z404 712 aa3.66□□□□□ -1.82
HMGN1P18-201ENST00000457642 CROCCP2Q86T23 111 aa3.66□□□□□ -1.82
HMGN1P18-201ENST00000457642 CREG2Q8IUH2 290 aa3.66□□□□□ -1.82
HMGN1P18-201ENST00000457642 CD302Q8IX05 232 aa3.66□□□□□ -1.82
HMGN1P18-201ENST00000457642 GSPT2Q8IYD1 628 aaKnown RBP3.66□□□□□ -1.82
HMGN1P18-201ENST00000457642 OTUD6BQ8N6M0 293 aa3.66□□□□□ -1.82
HMGN1P18-201ENST00000457642 CNBD1Q8NA66 436 aa3.66□□□□□ -1.82
HMGN1P18-201ENST00000457642 MARCH10Q8NA82 808 aaPredicted RBP3.66□□□□□ -1.82
HMGN1P18-201ENST00000457642 KIAA0895Q8NCT3 520 aa3.66□□□□□ -1.82
HMGN1P18-201ENST00000457642 LINC00116Q8NCU8 138 aa3.66□□□□□ -1.82
HMGN1P18-201ENST00000457642 C3orf20Q8ND61 904 aa3.66□□□□□ -1.82
HMGN1P18-201ENST00000457642 C1orf131Q8NDD1 294 aaKnown RBP3.66□□□□□ -1.82
HMGN1P18-201ENST00000457642 CCDC26Q8TAB7 109 aa3.66□□□□□ -1.82
HMGN1P18-201ENST00000457642 ZNF384Q8TF68 577 aa3.66□□□□□ -1.82
HMGN1P18-201ENST00000457642 IFT81Q8WYA0 676 aa3.66□□□□□ -1.82
HMGN1P18-201ENST00000457642 DDX12PQ92771 950 aa3.66□□□□□ -1.82
HMGN1P18-201ENST00000457642 VTI1AQ96AJ9 217 aa3.66□□□□□ -1.82
HMGN1P18-201ENST00000457642 RBM17Q96I25 401 aaKnown RBP3.66□□□□□ -1.82
HMGN1P18-201ENST00000457642 CALR3Q96L12 384 aaKnown RBP3.66□□□□□ -1.82
HMGN1P18-201ENST00000457642 CCDC43Q96MW1 224 aaKnown RBP3.66□□□□□ -1.82
HMGN1P18-201ENST00000457642 MTMR9Q96QG7 549 aa3.66□□□□□ -1.82
HMGN1P18-201ENST00000457642 PIGSQ96S52 555 aa3.66□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms