RNA–Protein interactions for RNA: ENST00000456560.6

SEMA3B-209, Transcript of semaphorin 3B, humanhuman

TSL 1 (best) BASIC

Gene SEMA3B, Length 2,221 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-209ENST00000456560 KCNMB3Q9NPA1 279 aa20.43■□□□□ 0.86
SEMA3B-209ENST00000456560 MYO6Q9UM54 1294 aa20.43■□□□□ 0.86
SEMA3B-209ENST00000456560 SCN9AQ15858 1988 aa20.43■□□□□ 0.86
SEMA3B-209ENST00000456560 POLR3GO15318 223 aaPredicted RBP20.42■□□□□ 0.86
SEMA3B-209ENST00000456560 TFRCP02786 760 aaKnown RBP20.42■□□□□ 0.86
SEMA3B-209ENST00000456560 BRD3Q15059 726 aa20.42■□□□□ 0.86
SEMA3B-209ENST00000456560 CDC37Q16543 378 aaPredicted RBP20.42■□□□□ 0.86
SEMA3B-209ENST00000456560 GLIS3Q8NEA6 775 aa20.42■□□□□ 0.86
SEMA3B-209ENST00000456560 ANO3Q9BYT9 981 aa20.42■□□□□ 0.86
SEMA3B-209ENST00000456560 UBXN6Q9BZV1 441 aa20.42■□□□□ 0.86
SEMA3B-209ENST00000456560 KDM3AQ9Y4C1 1321 aa20.42■□□□□ 0.86
SEMA3B-209ENST00000456560 MARCH6O60337 910 aa20.42■□□□□ 0.86
SEMA3B-209ENST00000456560 SASH3O75995 380 aa20.42■□□□□ 0.86
SEMA3B-209ENST00000456560 COASYQ13057 564 aa20.42■□□□□ 0.86
SEMA3B-209ENST00000456560 LRRC41Q15345 812 aa20.42■□□□□ 0.86
SEMA3B-209ENST00000456560 NT5C3AQ9H0P0 336 aa20.42■□□□□ 0.86
SEMA3B-209ENST00000456560 RAB21Q9UL25 225 aa20.42■□□□□ 0.86
SEMA3B-209ENST00000456560 CCDC151A5D8V7 595 aa20.41■□□□□ 0.86
SEMA3B-209ENST00000456560 POTEB2H3BUK9 544 aa20.41■□□□□ 0.86
SEMA3B-209ENST00000456560 ECE2O60344 883 aa20.41■□□□□ 0.86
SEMA3B-209ENST00000456560 ZCWPW2Q504Y3 356 aa20.41■□□□□ 0.86
SEMA3B-209ENST00000456560 CCDC122Q5T0U0 273 aa20.41■□□□□ 0.86
SEMA3B-209ENST00000456560 MOXD1Q6UVY6 613 aa20.41■□□□□ 0.86
SEMA3B-209ENST00000456560 TRAPPC11Q7Z392 1133 aa20.41■□□□□ 0.86
SEMA3B-209ENST00000456560 C2CD5Q86YS7 1000 aa20.41■□□□□ 0.86
SEMA3B-209ENST00000456560 CRYGNQ8WXF5 182 aa20.41■□□□□ 0.86
SEMA3B-209ENST00000456560 ARFGAP3Q9NP61 516 aa20.41■□□□□ 0.86
SEMA3B-209ENST00000456560 ZKSCAN7Q9P0L1 754 aaPredicted RBP20.41■□□□□ 0.86
SEMA3B-209ENST00000456560 TFR2Q9UP52 801 aa20.41■□□□□ 0.86
SEMA3B-209ENST00000456560 RCCD1A6NED2 376 aa20.41■□□□□ 0.86
SEMA3B-209ENST00000456560 MEIS2O14770 477 aa20.41■□□□□ 0.86
SEMA3B-209ENST00000456560 STYK1Q6J9G0 422 aa20.41■□□□□ 0.86
SEMA3B-209ENST00000456560 MYOCDQ8IZQ8 938 aa20.41■□□□□ 0.86
SEMA3B-209ENST00000456560 JAKMIP2Q96AA8 810 aa20.41■□□□□ 0.86
SEMA3B-209ENST00000456560 PANK4Q9NVE7 773 aa20.41■□□□□ 0.86
SEMA3B-209ENST00000456560 PLAGL2Q9UPG8 496 aa20.41■□□□□ 0.86
SEMA3B-209ENST00000456560 CTAGE15A4D2H0 777 aa20.4■□□□□ 0.86
SEMA3B-209ENST00000456560 CTAGE8P0CG41 777 aa20.4■□□□□ 0.86
SEMA3B-209ENST00000456560 TMEM179Q6ZVK1 233 aa20.4■□□□□ 0.86
SEMA3B-209ENST00000456560 CTAGE6Q86UF2 777 aa20.4■□□□□ 0.86
SEMA3B-209ENST00000456560 CTAGE4Q8IX94 777 aa20.4■□□□□ 0.86
SEMA3B-209ENST00000456560 TSG101Q99816 390 aa20.4■□□□□ 0.86
SEMA3B-209ENST00000456560 LACRTQ9GZZ8 138 aa20.4■□□□□ 0.86
SEMA3B-209ENST00000456560 SERPINA10Q9UK55 444 aa20.4■□□□□ 0.86
SEMA3B-209ENST00000456560 E9PMD0 336 aa20.39■□□□□ 0.86
SEMA3B-209ENST00000456560 EPHB6O15197 1021 aa20.39■□□□□ 0.86
SEMA3B-209ENST00000456560 RBM5P52756 815 aaKnown RBP eCLIP20.39■□□□□ 0.863e-6■■□□□ 12.7
SEMA3B-209ENST00000456560 AP3B2Q13367 1082 aa20.39■□□□□ 0.86
SEMA3B-209ENST00000456560 PAPD7Q5XG87 772 aaKnown RBP20.39■□□□□ 0.86
SEMA3B-209ENST00000456560 KIAA1328Q86T90 577 aa20.39■□□□□ 0.86
SEMA3B-209ENST00000456560 GMCL1P1Q8NEA9 526 aa20.39■□□□□ 0.86
SEMA3B-209ENST00000456560 HNRNPLLQ8WVV9 542 aaKnown RBP20.39■□□□□ 0.86
SEMA3B-209ENST00000456560 PURBQ96QR8 312 aaKnown RBP20.39■□□□□ 0.86
SEMA3B-209ENST00000456560 P2RX7Q99572 595 aaKnown RBP20.39■□□□□ 0.86
SEMA3B-209ENST00000456560 KIAA1024Q9UPX6 916 aa20.39■□□□□ 0.86
SEMA3B-209ENST00000456560 PCDHA2Q9Y5H9 948 aa20.39■□□□□ 0.86
SEMA3B-209ENST00000456560 F5H6K3 240 aa20.39■□□□□ 0.85
SEMA3B-209ENST00000456560 KRT86O43790 486 aa20.39■□□□□ 0.85
SEMA3B-209ENST00000456560 RAD21O60216 631 aa20.39■□□□□ 0.85
SEMA3B-209ENST00000456560 ICA1Q05084 483 aa20.39■□□□□ 0.85
SEMA3B-209ENST00000456560 KLRC3Q07444 240 aa20.39■□□□□ 0.85
SEMA3B-209ENST00000456560 FAM26FQ5R3K3 315 aa20.39■□□□□ 0.85
SEMA3B-209ENST00000456560 CCDC84Q86UT8 332 aaPredicted RBP20.39■□□□□ 0.85
SEMA3B-209ENST00000456560 EHBP1Q8NDI1 1231 aa20.39■□□□□ 0.85
SEMA3B-209ENST00000456560 PNKPQ96T60 521 aa20.39■□□□□ 0.85
SEMA3B-209ENST00000456560 FUT8Q9BYC5 575 aa20.39■□□□□ 0.85
SEMA3B-209ENST00000456560 BMP2KQ9NSY1 1161 aaPredicted RBP20.39■□□□□ 0.85
SEMA3B-209ENST00000456560 SLX4Q8IY92 1834 aa20.39■□□□□ 0.85
SEMA3B-209ENST00000456560 PLA2G4BP0C869 781 aa20.38■□□□□ 0.85
SEMA3B-209ENST00000456560 GMCL1Q96IK5 515 aa20.38■□□□□ 0.85
SEMA3B-209ENST00000456560 TRIM34Q9BYJ4 488 aa20.38■□□□□ 0.85
SEMA3B-209ENST00000456560 ZNF263O14978 683 aa20.38■□□□□ 0.85
SEMA3B-209ENST00000456560 ZBTB7AO95365 584 aa20.38■□□□□ 0.85
SEMA3B-209ENST00000456560 MMP14P50281 582 aa20.38■□□□□ 0.85
SEMA3B-209ENST00000456560 MCTP2Q6DN12 878 aa20.38■□□□□ 0.85
SEMA3B-209ENST00000456560 SLFN12Q8IYM2 578 aa20.38■□□□□ 0.85
SEMA3B-209ENST00000456560 AMNQ9BXJ7 453 aa20.38■□□□□ 0.85
SEMA3B-209ENST00000456560 ATP1A1P05023 1023 aaKnown RBP20.37■□□□□ 0.85
SEMA3B-209ENST00000456560 VAV2P52735 878 aa20.37■□□□□ 0.85
SEMA3B-209ENST00000456560 R3HDM1Q15032 1099 aaKnown RBP20.37■□□□□ 0.85
SEMA3B-209ENST00000456560 LONRF2Q1L5Z9 754 aa20.37■□□□□ 0.85
SEMA3B-209ENST00000456560 ABCB5Q2M3G0 1257 aa20.37■□□□□ 0.85
SEMA3B-209ENST00000456560 FGFBP2Q9BYJ0 223 aa20.37■□□□□ 0.85
SEMA3B-209ENST00000456560 FAM207AQ9NSI2 230 aaPredicted RBP20.37■□□□□ 0.85
SEMA3B-209ENST00000456560 ARHGAP20Q9P2F6 1191 aa20.37■□□□□ 0.85
SEMA3B-209ENST00000456560 ATRNL1Q5VV63 1379 aa20.37■□□□□ 0.85
SEMA3B-209ENST00000456560 POTEB3A0JP26 581 aa20.37■□□□□ 0.85
SEMA3B-209ENST00000456560 POTECB2RU33 542 aa20.37■□□□□ 0.85
SEMA3B-209ENST00000456560 H0YIN7 160 aa20.37■□□□□ 0.85
SEMA3B-209ENST00000456560 IPO7O95373 1038 aaKnown RBP20.37■□□□□ 0.85
SEMA3B-209ENST00000456560 JAG1P78504 1218 aa20.37■□□□□ 0.85
SEMA3B-209ENST00000456560 ARHGAP4P98171 946 aa20.37■□□□□ 0.85
SEMA3B-209ENST00000456560 FKBP3Q00688 224 aaKnown RBP20.37■□□□□ 0.85
SEMA3B-209ENST00000456560 SPIRE1Q08AE8 756 aa20.37■□□□□ 0.85
SEMA3B-209ENST00000456560 NCAPH2Q6IBW4 605 aa20.37■□□□□ 0.85
SEMA3B-209ENST00000456560 POTEBQ6S5H4 581 aa20.37■□□□□ 0.85
SEMA3B-209ENST00000456560 CCDC65Q8IXS2 484 aa20.37■□□□□ 0.85
SEMA3B-209ENST00000456560 ETNPPLQ8TBG4 499 aa20.37■□□□□ 0.85
SEMA3B-209ENST00000456560 BAP1Q92560 729 aa20.37■□□□□ 0.85
SEMA3B-209ENST00000456560 UIMC1Q96RL1 719 aa20.37■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms