RNA–Protein interactions for RNA: ENST00000455362.1

HMGB1P4-201, Transcript of high mobility group box 1 pseudogene 4, humanhuman

BASIC

Gene HMGB1P4, Length 567 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P4-201ENST00000455362 SAMD5Q5TGI4 173 aa6.11□□□□□ -1.43
HMGB1P4-201ENST00000455362 RNF219Q5W0B1 726 aaPredicted RBP6.11□□□□□ -1.43
HMGB1P4-201ENST00000455362 NXNQ6DKJ4 435 aa6.11□□□□□ -1.43
HMGB1P4-201ENST00000455362 VHLLQ6RSH7 139 aa6.11□□□□□ -1.43
HMGB1P4-201ENST00000455362 KRBA2Q6ZNG9 492 aa6.11□□□□□ -1.43
HMGB1P4-201ENST00000455362 STRA8Q7Z7C7 330 aa6.11□□□□□ -1.43
HMGB1P4-201ENST00000455362 CNTROBQ8N137 903 aa6.11□□□□□ -1.43
HMGB1P4-201ENST00000455362 AHI1Q8N157 1196 aa6.11□□□□□ -1.43
HMGB1P4-201ENST00000455362 ZSCAN1Q8NBB4 408 aa6.11□□□□□ -1.43
HMGB1P4-201ENST00000455362 OR13H1Q8NG92 308 aa6.11□□□□□ -1.43
HMGB1P4-201ENST00000455362 PPIL4Q8WUA2 492 aaKnown RBP eCLIP6.11□□□□□ -1.43
HMGB1P4-201ENST00000455362 CHMP4CQ96CF2 233 aa6.11□□□□□ -1.43
HMGB1P4-201ENST00000455362 ZKSCAN3Q9BRR0 538 aa6.11□□□□□ -1.43
HMGB1P4-201ENST00000455362 YIPF4Q9BSR8 244 aa6.11□□□□□ -1.43
HMGB1P4-201ENST00000455362 EPN3Q9H201 632 aa6.11□□□□□ -1.43
HMGB1P4-201ENST00000455362 CRISPLD1Q9H336 500 aa6.11□□□□□ -1.43
HMGB1P4-201ENST00000455362 EHMT1Q9H9B1 1298 aa6.11□□□□□ -1.43
HMGB1P4-201ENST00000455362 PPCSQ9HAB8 311 aa6.11□□□□□ -1.43
HMGB1P4-201ENST00000455362 SWAP70Q9UH65 585 aa6.11□□□□□ -1.43
HMGB1P4-201ENST00000455362 ANAPC4Q9UJX5 808 aa6.11□□□□□ -1.43
HMGB1P4-201ENST00000455362 H0YIN7 160 aa6.1□□□□□ -1.43
HMGB1P4-201ENST00000455362 SASH3O75995 380 aa6.1□□□□□ -1.43
HMGB1P4-201ENST00000455362 EYA4O95677 639 aa6.1□□□□□ -1.43
HMGB1P4-201ENST00000455362 F11P03951 625 aa6.1□□□□□ -1.43
HMGB1P4-201ENST00000455362 PSAPP07602 524 aa6.1□□□□□ -1.43
HMGB1P4-201ENST00000455362 IFIT1P09914 478 aaKnown RBP6.1□□□□□ -1.43
HMGB1P4-201ENST00000455362 UQCRFS1P1P0C7P4 283 aa6.1□□□□□ -1.43
HMGB1P4-201ENST00000455362 RARAP10276 462 aa6.1□□□□□ -1.43
HMGB1P4-201ENST00000455362 RHOQP17081 205 aa6.1□□□□□ -1.43
HMGB1P4-201ENST00000455362 ITPKAP23677 461 aa6.1□□□□□ -1.43
HMGB1P4-201ENST00000455362 GRNP28799 593 aaKnown RBP6.1□□□□□ -1.43
HMGB1P4-201ENST00000455362 ALDH1B1P30837 517 aa6.1□□□□□ -1.43
HMGB1P4-201ENST00000455362 PHKA1P46020 1223 aa6.1□□□□□ -1.43
HMGB1P4-201ENST00000455362 GRIA4P48058 902 aa6.1□□□□□ -1.43
HMGB1P4-201ENST00000455362 HYAL2Q12891 473 aa6.1□□□□□ -1.43
HMGB1P4-201ENST00000455362 SCARF1Q14162 830 aa6.1□□□□□ -1.43
HMGB1P4-201ENST00000455362 SPRED3Q2MJR0 410 aa6.1□□□□□ -1.43
HMGB1P4-201ENST00000455362 SLC10A6Q3KNW5 377 aa6.1□□□□□ -1.43
HMGB1P4-201ENST00000455362 RPS26P11Q5JNZ5 115 aaPredicted RBP6.1□□□□□ -1.43
HMGB1P4-201ENST00000455362 TTC39AQ5SRH9 613 aa6.1□□□□□ -1.43
HMGB1P4-201ENST00000455362 C6orf118Q5T5N4 469 aa6.1□□□□□ -1.43
HMGB1P4-201ENST00000455362 FIGNL1Q6PIW4 674 aa6.1□□□□□ -1.43
HMGB1P4-201ENST00000455362 CASC1Q6TDU7 716 aa6.1□□□□□ -1.43
HMGB1P4-201ENST00000455362 KRT25Q7Z3Z0 450 aa6.1□□□□□ -1.43
HMGB1P4-201ENST00000455362 DGKHQ86XP1 1220 aa6.1□□□□□ -1.43
HMGB1P4-201ENST00000455362 C2CD5Q86YS7 1000 aa6.1□□□□□ -1.43
HMGB1P4-201ENST00000455362 SP8Q8IXZ3 490 aa6.1□□□□□ -1.43
HMGB1P4-201ENST00000455362 IFNL3Q8IZI9 196 aa6.1□□□□□ -1.43
HMGB1P4-201ENST00000455362 PPM1KQ8N3J5 372 aa6.1□□□□□ -1.43
HMGB1P4-201ENST00000455362 E2F7Q96AV8 911 aa6.1□□□□□ -1.43
HMGB1P4-201ENST00000455362 EDC3Q96F86 508 aaKnown RBP6.1□□□□□ -1.43
HMGB1P4-201ENST00000455362 MASTLQ96GX5 879 aa6.1□□□□□ -1.43
HMGB1P4-201ENST00000455362 DHRS4Q9BTZ2 278 aa6.1□□□□□ -1.43
HMGB1P4-201ENST00000455362 EFCC1Q9HA90 598 aa6.1□□□□□ -1.43
HMGB1P4-201ENST00000455362 GPAMQ9HCL2 828 aa6.1□□□□□ -1.43
HMGB1P4-201ENST00000455362 TMEM39AQ9NV64 488 aa6.1□□□□□ -1.43
HMGB1P4-201ENST00000455362 INTS7Q9NVH2 962 aaKnown RBP6.1□□□□□ -1.43
HMGB1P4-201ENST00000455362 CYP8B1Q9UNU6 501 aa6.1□□□□□ -1.43
HMGB1P4-201ENST00000455362 ARAP2Q8WZ64 1704 aa6.1□□□□□ -1.43
HMGB1P4-201ENST00000455362 MYO5AQ9Y4I1 1855 aaKnown RBP6.09□□□□□ -1.43
HMGB1P4-201ENST00000455362 ZNF804BA4D1E1 1349 aa6.09□□□□□ -1.43
HMGB1P4-201ENST00000455362 TTLL8A6PVC2 850 aa6.09□□□□□ -1.43
HMGB1P4-201ENST00000455362 UPK3BL1B0FP48 263 aa6.09□□□□□ -1.43
HMGB1P4-201ENST00000455362 UPK3BL2E5RIL1 263 aa6.09□□□□□ -1.43
HMGB1P4-201ENST00000455362 GOLIM4O00461 696 aa6.09□□□□□ -1.43
HMGB1P4-201ENST00000455362 SUSD5O60279 629 aa6.09□□□□□ -1.43
HMGB1P4-201ENST00000455362 GRIN3BO60391 1043 aa6.09□□□□□ -1.43
HMGB1P4-201ENST00000455362 ZBTB7AO95365 584 aa6.09□□□□□ -1.43
HMGB1P4-201ENST00000455362 BDNFP23560 247 aa6.09□□□□□ -1.43
HMGB1P4-201ENST00000455362 MCAMP43121 646 aa6.09□□□□□ -1.43
HMGB1P4-201ENST00000455362 GPSM2P81274 684 aa6.09□□□□□ -1.43
HMGB1P4-201ENST00000455362 MORC3Q14149 939 aa6.09□□□□□ -1.43
HMGB1P4-201ENST00000455362 MAP7Q14244 749 aa6.09□□□□□ -1.43
HMGB1P4-201ENST00000455362 R3HDM1Q15032 1099 aaKnown RBP6.09□□□□□ -1.43
HMGB1P4-201ENST00000455362 LRRC14Q15048 493 aa6.09□□□□□ -1.43
HMGB1P4-201ENST00000455362 STYK1Q6J9G0 422 aa6.09□□□□□ -1.43
HMGB1P4-201ENST00000455362 SLC51AQ86UW1 340 aa6.09□□□□□ -1.43
HMGB1P4-201ENST00000455362 AMOTL1Q8IY63 956 aa6.09□□□□□ -1.43
HMGB1P4-201ENST00000455362 MAGEB6Q8N7X4 407 aa6.09□□□□□ -1.43
HMGB1P4-201ENST00000455362 GPATCH11Q8N954 259 aa6.09□□□□□ -1.43
HMGB1P4-201ENST00000455362 KBTBD3Q8NAB2 608 aa6.09□□□□□ -1.43
HMGB1P4-201ENST00000455362 ZNF622Q969S3 477 aaKnown RBP eCLIP6.09□□□□□ -1.43
HMGB1P4-201ENST00000455362 FAM84BQ96KN1 310 aaPredicted RBP6.09□□□□□ -1.43
HMGB1P4-201ENST00000455362 RTFDC1Q9BY42 306 aaPredicted RBP6.09□□□□□ -1.43
HMGB1P4-201ENST00000455362 RUBCNLQ9H714 662 aa6.09□□□□□ -1.43
HMGB1P4-201ENST00000455362 UPF2Q9HAU5 1272 aaKnown RBP6.09□□□□□ -1.43
HMGB1P4-201ENST00000455362 CASS4Q9NQ75 786 aa6.09□□□□□ -1.43
HMGB1P4-201ENST00000455362 PAG1Q9NWQ8 432 aa6.09□□□□□ -1.43
HMGB1P4-201ENST00000455362 ATP6V0A2Q9Y487 856 aa6.09□□□□□ -1.43
HMGB1P4-201ENST00000455362 SLX4Q8IY92 1834 aa6.09□□□□□ -1.44
HMGB1P4-201ENST00000455362 COL11A2P13942 1736 aaPredicted RBP6.08□□□□□ -1.44
HMGB1P4-201ENST00000455362 XDHP47989 1333 aa6.08□□□□□ -1.44
HMGB1P4-201ENST00000455362 IRS2Q9Y4H2 1338 aa6.08□□□□□ -1.44
HMGB1P4-201ENST00000455362 MYH7P12883 1935 aa6.08□□□□□ -1.44
HMGB1P4-201ENST00000455362 A0A096LPE4 126 aa6.08□□□□□ -1.44
HMGB1P4-201ENST00000455362 A0A1W2PPZ6 126 aa6.08□□□□□ -1.44
HMGB1P4-201ENST00000455362 METTL12A8MUP2 240 aa6.08□□□□□ -1.44
HMGB1P4-201ENST00000455362 HIP1O00291 1037 aa6.08□□□□□ -1.44
HMGB1P4-201ENST00000455362 TBX3O15119 743 aa6.08□□□□□ -1.44
HMGB1P4-201ENST00000455362 SGSM2O43147 1006 aa6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 82.9 ms