RNA–Protein interactions for RNA: ENST00000451716.5

COL27A1-202, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL27A1, Length 2,865 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-202ENST00000451716 MKL1Q969V6 931 aa13.43□□□□□ -0.26
COL27A1-202ENST00000451716 ANO3Q9BYT9 981 aa13.43□□□□□ -0.26
COL27A1-202ENST00000451716 SERPINA10Q9UK55 444 aa13.43□□□□□ -0.26
COL27A1-202ENST00000451716 A0A1W2PRG0 241 aa13.43□□□□□ -0.26
COL27A1-202ENST00000451716 POTEB3A0JP26 581 aa13.43□□□□□ -0.26
COL27A1-202ENST00000451716 POTECB2RU33 542 aa13.43□□□□□ -0.26
COL27A1-202ENST00000451716 MEIS2O14770 477 aa13.43□□□□□ -0.26
COL27A1-202ENST00000451716 DNM2P50570 870 aa13.43□□□□□ -0.26
COL27A1-202ENST00000451716 GYS2P54840 703 aa13.43□□□□□ -0.26
COL27A1-202ENST00000451716 TEX35Q5T0J7 233 aa13.43□□□□□ -0.26
COL27A1-202ENST00000451716 POTEBQ6S5H4 581 aa13.43□□□□□ -0.26
COL27A1-202ENST00000451716 SLC35F6Q8N357 371 aa13.43□□□□□ -0.26
COL27A1-202ENST00000451716 FGFBP2Q9BYJ0 223 aa13.43□□□□□ -0.26
COL27A1-202ENST00000451716 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.43□□□□□ -0.26
COL27A1-202ENST00000451716 KIAA1024Q9UPX6 916 aa13.43□□□□□ -0.26
COL27A1-202ENST00000451716 REXO2Q9Y3B8 237 aaKnown RBP13.43□□□□□ -0.26
COL27A1-202ENST00000451716 HOXA13P31271 388 aaPredicted RBP13.42□□□□□ -0.26
COL27A1-202ENST00000451716 EN1Q05925 392 aaPredicted RBP13.42□□□□□ -0.26
COL27A1-202ENST00000451716 EZH2Q15910 746 aaKnown RBP13.42□□□□□ -0.26
COL27A1-202ENST00000451716 TMEM119Q4V9L6 283 aa13.42□□□□□ -0.26
COL27A1-202ENST00000451716 CENPPQ6IPU0 288 aa13.42□□□□□ -0.26
COL27A1-202ENST00000451716 TMEM179Q6ZVK1 233 aa13.42□□□□□ -0.26
COL27A1-202ENST00000451716 DCAF4Q8WV16 495 aa13.42□□□□□ -0.26
COL27A1-202ENST00000451716 DDX41Q9UJV9 622 aaKnown RBP13.42□□□□□ -0.26
COL27A1-202ENST00000451716 EPN1Q9Y6I3 576 aaPredicted RBP13.42□□□□□ -0.26
COL27A1-202ENST00000451716 GREB1LQ9C091 1923 aaPredicted RBP13.42□□□□□ -0.26
COL27A1-202ENST00000451716 A0A1W2PQC6 194 aa13.42□□□□□ -0.26
COL27A1-202ENST00000451716 SMCHD1A6NHR9 2005 aa13.42□□□□□ -0.26
COL27A1-202ENST00000451716 RAD17O75943 681 aa13.42□□□□□ -0.26
COL27A1-202ENST00000451716 NDUFA10O95299 355 aa13.42□□□□□ -0.26
COL27A1-202ENST00000451716 ARHGAP25P42331 645 aa13.42□□□□□ -0.26
COL27A1-202ENST00000451716 CLCN6P51797 869 aa13.42□□□□□ -0.26
COL27A1-202ENST00000451716 PRR16Q569H4 304 aa13.42□□□□□ -0.26
COL27A1-202ENST00000451716 ZNF772Q68DY9 489 aaPredicted RBP13.42□□□□□ -0.26
COL27A1-202ENST00000451716 ZNF513Q8N8E2 541 aaPredicted RBP13.42□□□□□ -0.26
COL27A1-202ENST00000451716 CNKSR1Q969H4 720 aa13.42□□□□□ -0.26
COL27A1-202ENST00000451716 MRIQ9BWK5 157 aa13.42□□□□□ -0.26
COL27A1-202ENST00000451716 PUF60Q9UHX1 559 aaKnown RBP13.42□□□□□ -0.26
COL27A1-202ENST00000451716 CAPN11Q9UMQ6 739 aa13.42□□□□□ -0.26
COL27A1-202ENST00000451716 H2AFXP16104 143 aaPredicted RBP13.42□□□□□ -0.26
COL27A1-202ENST00000451716 HMGB2P26583 209 aaKnown RBP13.42□□□□□ -0.26
COL27A1-202ENST00000451716 ECE1P42892 770 aa13.42□□□□□ -0.26
COL27A1-202ENST00000451716 HDLBPQ00341 1268 aaKnown RBP13.42□□□□□ -0.26
COL27A1-202ENST00000451716 KIF4BQ2VIQ3 1234 aa13.42□□□□□ -0.26
COL27A1-202ENST00000451716 NOC3LQ8WTT2 800 aaKnown RBP13.42□□□□□ -0.26
COL27A1-202ENST00000451716 FAM212AQ96EL1 285 aa13.42□□□□□ -0.26
COL27A1-202ENST00000451716 GUCA1BQ9UMX6 200 aa13.42□□□□□ -0.26
COL27A1-202ENST00000451716 PVALEFA0A1B0GWK0 134 aa13.41□□□□□ -0.26
COL27A1-202ENST00000451716 EFCAB8A8MWE9 144 aa13.41□□□□□ -0.26
COL27A1-202ENST00000451716 HNRNPH2P55795 449 aaKnown RBP13.41□□□□□ -0.26
COL27A1-202ENST00000451716 CDAN1Q8IWY9 1227 aa13.41□□□□□ -0.26
COL27A1-202ENST00000451716 DNAJC19Q96DA6 116 aa13.41□□□□□ -0.26
COL27A1-202ENST00000451716 BORCS6Q96GS4 357 aa13.41□□□□□ -0.26
COL27A1-202ENST00000451716 DNAJC7Q99615 494 aa13.41□□□□□ -0.26
COL27A1-202ENST00000451716 EPHB6O15197 1021 aa13.41□□□□□ -0.26
COL27A1-202ENST00000451716 TSR1Q2NL82 804 aaKnown RBP13.41□□□□□ -0.26
COL27A1-202ENST00000451716 RBM26Q5T8P6 1007 aaKnown RBP13.41□□□□□ -0.26
COL27A1-202ENST00000451716 SLC30A10Q6XR72 485 aa13.41□□□□□ -0.26
COL27A1-202ENST00000451716 CCDC155Q8N6L0 562 aa13.41□□□□□ -0.26
COL27A1-202ENST00000451716 CYP2W1Q8TAV3 490 aa13.41□□□□□ -0.26
COL27A1-202ENST00000451716 TTYH3Q9C0H2 523 aa13.41□□□□□ -0.26
COL27A1-202ENST00000451716 FAM207AQ9NSI2 230 aaPredicted RBP13.41□□□□□ -0.26
COL27A1-202ENST00000451716 SCAF8Q9UPN6 1271 aaKnown RBP13.41□□□□□ -0.26
COL27A1-202ENST00000451716 POTEFA5A3E0 1075 aa13.4□□□□□ -0.26
COL27A1-202ENST00000451716 MEIS1O00470 390 aa13.4□□□□□ -0.26
COL27A1-202ENST00000451716 POTEIP0CG38 1075 aa13.4□□□□□ -0.26
COL27A1-202ENST00000451716 GCFC2P16383 781 aaKnown RBP13.4□□□□□ -0.26
COL27A1-202ENST00000451716 ARHGAP4P98171 946 aa13.4□□□□□ -0.26
COL27A1-202ENST00000451716 COASYQ13057 564 aa13.4□□□□□ -0.26
COL27A1-202ENST00000451716 SLC15A2Q16348 729 aa13.4□□□□□ -0.26
COL27A1-202ENST00000451716 KIAA1755Q5JYT7 1200 aa13.4□□□□□ -0.26
COL27A1-202ENST00000451716 POTEGQ6S5H5 508 aa13.4□□□□□ -0.26
COL27A1-202ENST00000451716 POTEEQ6S8J3 1075 aa13.4□□□□□ -0.26
COL27A1-202ENST00000451716 FBXO11Q86XK2 927 aa13.4□□□□□ -0.26
COL27A1-202ENST00000451716 FAM114A1Q8IWE2 563 aa13.4□□□□□ -0.26
COL27A1-202ENST00000451716 NELFCDQ8IXH7 590 aa13.4□□□□□ -0.26
COL27A1-202ENST00000451716 ACER1Q8TDN7 264 aa13.4□□□□□ -0.26
COL27A1-202ENST00000451716 AMNQ9BXJ7 453 aa13.4□□□□□ -0.26
COL27A1-202ENST00000451716 ZHX3Q9H4I2 956 aa13.4□□□□□ -0.26
COL27A1-202ENST00000451716 POLD4Q9HCU8 107 aa13.4□□□□□ -0.26
COL27A1-202ENST00000451716 SUFUQ9UMX1 484 aa13.4□□□□□ -0.26
COL27A1-202ENST00000451716 MED24O75448 989 aa13.4□□□□□ -0.26
COL27A1-202ENST00000451716 RXRBP28702 533 aa13.4□□□□□ -0.26
COL27A1-202ENST00000451716 FKBP1AP62942 108 aaKnown RBP13.4□□□□□ -0.26
COL27A1-202ENST00000451716 SYDE2Q5VT97 1194 aa13.4□□□□□ -0.26
COL27A1-202ENST00000451716 KCNMB3Q9NPA1 279 aa13.4□□□□□ -0.26
COL27A1-202ENST00000451716 PANK4Q9NVE7 773 aa13.4□□□□□ -0.26
COL27A1-202ENST00000451716 FAM86B1E9PN63 330 aa13.39□□□□□ -0.27
COL27A1-202ENST00000451716 SEC31AO94979 1220 aaKnown RBP13.39□□□□□ -0.27
COL27A1-202ENST00000451716 FAM86B2P0C5J1 330 aa13.39□□□□□ -0.27
COL27A1-202ENST00000451716 BMP3P12645 472 aa13.39□□□□□ -0.27
COL27A1-202ENST00000451716 SSR1P43307 286 aaKnown RBP13.39□□□□□ -0.27
COL27A1-202ENST00000451716 ZYXQ15942 572 aaKnown RBP13.39□□□□□ -0.27
COL27A1-202ENST00000451716 CC2D2BQ6DHV5 1058 aa13.39□□□□□ -0.27
COL27A1-202ENST00000451716 GUF1Q8N442 669 aaKnown RBP13.39□□□□□ -0.27
COL27A1-202ENST00000451716 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.39□□□□□ -0.27
COL27A1-202ENST00000451716 ENC1O14682 589 aa13.39□□□□□ -0.27
COL27A1-202ENST00000451716 PLEKP08567 350 aaPredicted RBP13.39□□□□□ -0.27
COL27A1-202ENST00000451716 PLA2G4BP0C869 781 aa13.39□□□□□ -0.27
COL27A1-202ENST00000451716 PSMC6P62333 389 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms