RNA–Protein interactions for RNA: ENST00000447609.5

LMO3-209, Transcript of LIM domain only 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMO3, Length 3,365 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-209ENST00000447609 TSKSQ9UJT2 592 aa6.03□□□□□ -1.44
LMO3-209ENST00000447609 GUCA1BQ9UMX6 200 aa6.03□□□□□ -1.44
LMO3-209ENST00000447609 PCDHAC2Q9Y5I4 1007 aa6.03□□□□□ -1.44
LMO3-209ENST00000447609 IVNS1ABPQ9Y6Y0 642 aa6.03□□□□□ -1.44
LMO3-209ENST00000447609 PAPPAQ13219 1627 aa6.03□□□□□ -1.44
LMO3-209ENST00000447609 TCP1P17987 556 aaKnown RBP6.03□□□□□ -1.44
LMO3-209ENST00000447609 FNTAP49354 379 aa6.03□□□□□ -1.44
LMO3-209ENST00000447609 AMPD2Q01433 879 aa6.03□□□□□ -1.44
LMO3-209ENST00000447609 MORC3Q14149 939 aa6.03□□□□□ -1.44
LMO3-209ENST00000447609 SPA17Q15506 151 aa6.03□□□□□ -1.44
LMO3-209ENST00000447609 NT5DC1Q5TFE4 455 aa6.03□□□□□ -1.44
LMO3-209ENST00000447609 DHX37Q8IY37 1157 aaKnown RBP6.03□□□□□ -1.44
LMO3-209ENST00000447609 TRIM22Q8IYM9 498 aa6.03□□□□□ -1.44
LMO3-209ENST00000447609 MMGT1Q8N4V1 131 aa6.03□□□□□ -1.44
LMO3-209ENST00000447609 SCLT1Q96NL6 688 aa6.03□□□□□ -1.44
LMO3-209ENST00000447609 NCOA5Q9HCD5 579 aaKnown RBP6.03□□□□□ -1.44
LMO3-209ENST00000447609 DCP1AQ9NPI6 582 aaPredicted RBP6.03□□□□□ -1.44
LMO3-209ENST00000447609 LUC7LQ9NQ29 371 aaKnown RBP6.03□□□□□ -1.44
LMO3-209ENST00000447609 RMND1Q9NWS8 449 aa6.03□□□□□ -1.44
LMO3-209ENST00000447609 RNF14Q9UBS8 474 aa6.03□□□□□ -1.44
LMO3-209ENST00000447609 HERC5Q9UII4 1024 aaKnown RBP6.03□□□□□ -1.44
LMO3-209ENST00000447609 SAMM50Q9Y512 469 aa6.03□□□□□ -1.44
LMO3-209ENST00000447609 PPP2R3BQ9Y5P8 575 aa6.03□□□□□ -1.44
LMO3-209ENST00000447609 KLHL33A6NCF5 533 aa6.02□□□□□ -1.45
LMO3-209ENST00000447609 TMEM88BA6NKF7 163 aa6.02□□□□□ -1.45
LMO3-209ENST00000447609 PPP1R37O75864 691 aa6.02□□□□□ -1.45
LMO3-209ENST00000447609 XBP1P17861 261 aa6.02□□□□□ -1.45
LMO3-209ENST00000447609 KIF5BP33176 963 aa6.02□□□□□ -1.45
LMO3-209ENST00000447609 SLC1A4P43007 532 aa6.02□□□□□ -1.45
LMO3-209ENST00000447609 KIF5AQ12840 1032 aa6.02□□□□□ -1.45
LMO3-209ENST00000447609 TRAF1Q13077 416 aa6.02□□□□□ -1.45
LMO3-209ENST00000447609 PDCD2Q16342 344 aaPredicted RBP6.02□□□□□ -1.45
LMO3-209ENST00000447609 C11orf91Q3C1V1 193 aa6.02□□□□□ -1.45
LMO3-209ENST00000447609 RILPL1Q5EBL4 403 aa6.02□□□□□ -1.45
LMO3-209ENST00000447609 AKNAD1Q5T1N1 836 aa6.02□□□□□ -1.45
LMO3-209ENST00000447609 NCAPH2Q6IBW4 605 aa6.02□□□□□ -1.45
LMO3-209ENST00000447609 PPP4R3AQ6IN85 833 aa6.02□□□□□ -1.45
LMO3-209ENST00000447609 RUFY4Q6ZNE9 571 aa6.02□□□□□ -1.45
LMO3-209ENST00000447609 METTL16Q86W50 562 aaKnown RBP6.02□□□□□ -1.45
LMO3-209ENST00000447609 MICU3Q86XE3 530 aa6.02□□□□□ -1.45
LMO3-209ENST00000447609 CPXCR1Q8N123 301 aa6.02□□□□□ -1.45
LMO3-209ENST00000447609 TRIM58Q8NG06 486 aa6.02□□□□□ -1.45
LMO3-209ENST00000447609 OR8K1Q8NGG5 319 aa6.02□□□□□ -1.45
LMO3-209ENST00000447609 AENQ8WTP8 325 aaKnown RBP6.02□□□□□ -1.45
LMO3-209ENST00000447609 SAAL1Q96ER3 474 aa6.02□□□□□ -1.45
LMO3-209ENST00000447609 NUP58Q9BVL2 599 aa6.02□□□□□ -1.45
LMO3-209ENST00000447609 MOV10L1Q9BXT6 1211 aaKnown RBP6.02□□□□□ -1.45
LMO3-209ENST00000447609 IRX2Q9BZI1 471 aaPredicted RBP6.02□□□□□ -1.45
LMO3-209ENST00000447609 SLC40A1Q9NP59 571 aa6.02□□□□□ -1.45
LMO3-209ENST00000447609 GPCPD1Q9NPB8 672 aa6.02□□□□□ -1.45
LMO3-209ENST00000447609 JADE2Q9NQC1 790 aa6.02□□□□□ -1.45
LMO3-209ENST00000447609 ABHD10Q9NUJ1 306 aa6.02□□□□□ -1.45
LMO3-209ENST00000447609 INTS13Q9NVM9 706 aa6.02□□□□□ -1.45
LMO3-209ENST00000447609 MAGEC2Q9UBF1 373 aaPredicted RBP6.02□□□□□ -1.45
LMO3-209ENST00000447609 LUC7L2Q9Y383 392 aaKnown RBP6.02□□□□□ -1.45
LMO3-209ENST00000447609 LRP5O75197 1615 aa6.02□□□□□ -1.45
LMO3-209ENST00000447609 RREB1Q92766 1687 aa6.02□□□□□ -1.45
LMO3-209ENST00000447609 GOLGA8AA7E2F4 631 aa6.02□□□□□ -1.45
LMO3-209ENST00000447609 USP17L5A8MUK1 530 aa6.02□□□□□ -1.45
LMO3-209ENST00000447609 MYO1FO00160 1098 aa6.02□□□□□ -1.45
LMO3-209ENST00000447609 TULP1O00294 542 aaPredicted RBP6.02□□□□□ -1.45
LMO3-209ENST00000447609 PRC1O43663 620 aa6.02□□□□□ -1.45
LMO3-209ENST00000447609 BUB1BO60566 1050 aaPredicted RBP6.02□□□□□ -1.45
LMO3-209ENST00000447609 NDUFA10O95299 355 aa6.02□□□□□ -1.45
LMO3-209ENST00000447609 FAM107AO95990 144 aa6.02□□□□□ -1.45
LMO3-209ENST00000447609 TNFRSF8P28908 595 aa6.02□□□□□ -1.45
LMO3-209ENST00000447609 CASP14P31944 242 aa6.02□□□□□ -1.45
LMO3-209ENST00000447609 KRT9P35527 623 aa6.02□□□□□ -1.45
LMO3-209ENST00000447609 CDK8P49336 464 aa6.02□□□□□ -1.45
LMO3-209ENST00000447609 MTF1Q14872 753 aa6.02□□□□□ -1.45
LMO3-209ENST00000447609 ARHGEF6Q15052 776 aa6.02□□□□□ -1.45
LMO3-209ENST00000447609 EP400NLQ6ZTU2 488 aa6.02□□□□□ -1.45
LMO3-209ENST00000447609 CACNA2D4Q7Z3S7 1137 aa6.02□□□□□ -1.45
LMO3-209ENST00000447609 FAM83AQ86UY5 434 aa6.02□□□□□ -1.45
LMO3-209ENST00000447609 CCDC13Q8IYE1 715 aa6.02□□□□□ -1.45
LMO3-209ENST00000447609 CCDC170Q8IYT3 715 aa6.02□□□□□ -1.45
LMO3-209ENST00000447609 CACNA2D3Q8IZS8 1091 aa6.02□□□□□ -1.45
LMO3-209ENST00000447609 ANKS4BQ8N8V4 417 aa6.02□□□□□ -1.45
LMO3-209ENST00000447609 SLC44A5Q8NCS7 719 aa6.02□□□□□ -1.45
LMO3-209ENST00000447609 ZNF473Q8WTR7 871 aaKnown RBP6.02□□□□□ -1.45
LMO3-209ENST00000447609 CAVIN3Q969G5 261 aa6.02□□□□□ -1.45
LMO3-209ENST00000447609 FAM212AQ96EL1 285 aa6.02□□□□□ -1.45
LMO3-209ENST00000447609 CLIC6Q96NY7 704 aa6.02□□□□□ -1.45
LMO3-209ENST00000447609 GOPCQ9HD26 462 aa6.02□□□□□ -1.45
LMO3-209ENST00000447609 ADD3Q9UEY8 706 aaKnown RBP6.02□□□□□ -1.45
LMO3-209ENST00000447609 FLT1P17948 1338 aa6.02□□□□□ -1.45
LMO3-209ENST00000447609 COL5A3P25940 1745 aaPredicted RBP6.01□□□□□ -1.45
LMO3-209ENST00000447609 POTEIP0CG38 1075 aa6.01□□□□□ -1.45
LMO3-209ENST00000447609 POTEJP0CG39 1038 aa6.01□□□□□ -1.45
LMO3-209ENST00000447609 IDEP14735 1019 aa6.01□□□□□ -1.45
LMO3-209ENST00000447609 NR1D1P20393 614 aa6.01□□□□□ -1.45
LMO3-209ENST00000447609 OSBPP22059 807 aa6.01□□□□□ -1.45
LMO3-209ENST00000447609 LSP1P33241 339 aa6.01□□□□□ -1.45
LMO3-209ENST00000447609 PRPHP41219 470 aa6.01□□□□□ -1.45
LMO3-209ENST00000447609 NAA35Q5VZE5 725 aa6.01□□□□□ -1.45
LMO3-209ENST00000447609 APOBEC3HQ6NTF7 200 aaKnown RBP6.01□□□□□ -1.45
LMO3-209ENST00000447609 SHC4Q6S5L8 630 aa6.01□□□□□ -1.45
LMO3-209ENST00000447609 NLRP14Q86W24 1093 aa6.01□□□□□ -1.45
LMO3-209ENST00000447609 SPICE1Q8N0Z3 855 aa6.01□□□□□ -1.45
LMO3-209ENST00000447609 TMTC2Q8N394 836 aa6.01□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms