RNA–Protein interactions for RNA: ENST00000444475.5

UBR3-206, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 5

Gene UBR3, Length 3,821 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-206ENST00000444475 KIAA0754O94854 1291 aa4.46□□□□□ -1.69
UBR3-206ENST00000444475 TSPY3P0CV98 308 aa4.46□□□□□ -1.69
UBR3-206ENST00000444475 TSPY8P0CW00 308 aa4.46□□□□□ -1.69
UBR3-206ENST00000444475 KRT13P13646 458 aa4.46□□□□□ -1.69
UBR3-206ENST00000444475 HSPA4P34932 840 aa4.46□□□□□ -1.69
UBR3-206ENST00000444475 EVCP57679 992 aa4.46□□□□□ -1.69
UBR3-206ENST00000444475 NLRP5P59047 1200 aa4.46□□□□□ -1.69
UBR3-206ENST00000444475 TSPY1Q01534 308 aa4.46□□□□□ -1.69
UBR3-206ENST00000444475 PPA1Q15181 289 aa4.46□□□□□ -1.69
UBR3-206ENST00000444475 CAVIN4Q5BKX8 364 aa4.46□□□□□ -1.69
UBR3-206ENST00000444475 FAM209AQ5JX71 171 aa4.46□□□□□ -1.69
UBR3-206ENST00000444475 REXO1Q8N1G1 1221 aaKnown RBP4.46□□□□□ -1.69
UBR3-206ENST00000444475 TDRD7Q8NHU6 1098 aaKnown RBP4.46□□□□□ -1.69
UBR3-206ENST00000444475 KIAA1191Q96A73 305 aa4.46□□□□□ -1.69
UBR3-206ENST00000444475 SLC10A4Q96EP9 437 aa4.46□□□□□ -1.69
UBR3-206ENST00000444475 SLC4A9Q96Q91 983 aa4.46□□□□□ -1.69
UBR3-206ENST00000444475 GHITMQ9H3K2 345 aa4.46□□□□□ -1.69
UBR3-206ENST00000444475 NPHS2Q9NP85 383 aa4.46□□□□□ -1.69
UBR3-206ENST00000444475 NMRK2Q9NPI5 230 aa4.46□□□□□ -1.69
UBR3-206ENST00000444475 CFAP65Q6ZU64 1925 aaKnown RBP4.46□□□□□ -1.7
UBR3-206ENST00000444475 EIF3FO00303 357 aaPredicted RBP4.46□□□□□ -1.7
UBR3-206ENST00000444475 CASQ2O14958 399 aaPredicted RBP4.46□□□□□ -1.7
UBR3-206ENST00000444475 SH3BGRP55822 239 aaPredicted RBP4.46□□□□□ -1.7
UBR3-206ENST00000444475 ADAM15Q13444 863 aa4.46□□□□□ -1.7
UBR3-206ENST00000444475 BECN1Q14457 450 aa4.46□□□□□ -1.7
UBR3-206ENST00000444475 CCDC85BQ15834 202 aaPredicted RBP4.46□□□□□ -1.7
UBR3-206ENST00000444475 RUFY3Q7L099 469 aa4.46□□□□□ -1.7
UBR3-206ENST00000444475 NLRP10Q86W26 655 aa4.46□□□□□ -1.7
UBR3-206ENST00000444475 LURAP1LQ8IV03 231 aa4.46□□□□□ -1.7
UBR3-206ENST00000444475 LRRC47Q8N1G4 583 aaKnown RBP4.46□□□□□ -1.7
UBR3-206ENST00000444475 CREB3L4Q8TEY5 395 aa4.46□□□□□ -1.7
UBR3-206ENST00000444475 ZDHHC16Q969W1 377 aa4.46□□□□□ -1.7
UBR3-206ENST00000444475 UNC93B1Q9H1C4 597 aa4.46□□□□□ -1.7
UBR3-206ENST00000444475 XAB2Q9HCS7 855 aaKnown RBP4.46□□□□□ -1.7
UBR3-206ENST00000444475 VPS45Q9NRW7 570 aa4.46□□□□□ -1.7
UBR3-206ENST00000444475 AIPL1Q9NZN9 384 aa4.46□□□□□ -1.7
UBR3-206ENST00000444475 EIF2B4Q9UI10 523 aaKnown RBP4.46□□□□□ -1.7
UBR3-206ENST00000444475 ZFP37Q9Y6Q3 630 aaPredicted RBP4.46□□□□□ -1.7
UBR3-206ENST00000444475 TSPAN3O60637 253 aa4.46□□□□□ -1.7
UBR3-206ENST00000444475 MTRF1O75570 445 aaKnown RBP4.46□□□□□ -1.7
UBR3-206ENST00000444475 DDAH1O94760 285 aa4.46□□□□□ -1.7
UBR3-206ENST00000444475 TGDSO95455 350 aa4.46□□□□□ -1.7
UBR3-206ENST00000444475 COL6A2P12110 1019 aa4.46□□□□□ -1.7
UBR3-206ENST00000444475 TFE3P19532 575 aaPredicted RBP4.46□□□□□ -1.7
UBR3-206ENST00000444475 CD9P21926 228 aa4.46□□□□□ -1.7
UBR3-206ENST00000444475 PTPREP23469 700 aa4.46□□□□□ -1.7
UBR3-206ENST00000444475 PRPHP41219 470 aa4.46□□□□□ -1.7
UBR3-206ENST00000444475 TNNT3P45378 269 aaPredicted RBP4.46□□□□□ -1.7
UBR3-206ENST00000444475 MXI1P50539 228 aa4.46□□□□□ -1.7
UBR3-206ENST00000444475 ALDH3A2P51648 485 aa4.46□□□□□ -1.7
UBR3-206ENST00000444475 C21orf58P58505 322 aa4.46□□□□□ -1.7
UBR3-206ENST00000444475 PIP4K2BP78356 416 aa4.46□□□□□ -1.7
UBR3-206ENST00000444475 TEAD4Q15561 434 aa4.46□□□□□ -1.7
UBR3-206ENST00000444475 SEZ6Q53EL9 994 aa4.46□□□□□ -1.7
UBR3-206ENST00000444475 SLC30A6Q6NXT4 461 aa4.46□□□□□ -1.7
UBR3-206ENST00000444475 ALKBH5Q6P6C2 394 aaKnown RBP4.46□□□□□ -1.7
UBR3-206ENST00000444475 KDELC1Q6UW63 502 aa4.46□□□□□ -1.7
UBR3-206ENST00000444475 MYOCDQ8IZQ8 938 aa4.46□□□□□ -1.7
UBR3-206ENST00000444475 CACNA2D3Q8IZS8 1091 aa4.46□□□□□ -1.7
UBR3-206ENST00000444475 KLHL23Q8NBE8 558 aa4.46□□□□□ -1.7
UBR3-206ENST00000444475 DENND1AQ8TEH3 1009 aa4.46□□□□□ -1.7
UBR3-206ENST00000444475 LRGUKQ96M69 825 aa4.46□□□□□ -1.7
UBR3-206ENST00000444475 BHMT2Q9H2M3 363 aa4.46□□□□□ -1.7
UBR3-206ENST00000444475 VTA1Q9NP79 307 aa4.46□□□□□ -1.7
UBR3-206ENST00000444475 CFDP1Q9UEE9 299 aaPredicted RBP4.46□□□□□ -1.7
UBR3-206ENST00000444475 RRP7AQ9Y3A4 280 aaKnown RBP4.46□□□□□ -1.7
UBR3-206ENST00000444475 USP1O94782 785 aa4.45□□□□□ -1.7
UBR3-206ENST00000444475 GUCA1CO95843 209 aa4.45□□□□□ -1.7
UBR3-206ENST00000444475 ZBTB48P10074 688 aaPredicted RBP4.45□□□□□ -1.7
UBR3-206ENST00000444475 RLBP1P12271 317 aa4.45□□□□□ -1.7
UBR3-206ENST00000444475 MC4RP32245 332 aa4.45□□□□□ -1.7
UBR3-206ENST00000444475 CTCFP49711 727 aaPredicted RBP4.45□□□□□ -1.7
UBR3-206ENST00000444475 ARFIP1P53367 373 aa4.45□□□□□ -1.7
UBR3-206ENST00000444475 HIRAP54198 1017 aaPredicted RBP4.45□□□□□ -1.7
UBR3-206ENST00000444475 DRG2P55039 364 aaKnown RBP4.45□□□□□ -1.7
UBR3-206ENST00000444475 ZNF267Q14586 743 aaPredicted RBP4.45□□□□□ -1.7
UBR3-206ENST00000444475 YOD1Q5VVQ6 348 aaPredicted RBP4.45□□□□□ -1.7
UBR3-206ENST00000444475 PPP1R42Q7Z4L9 355 aa4.45□□□□□ -1.7
UBR3-206ENST00000444475 HEATR4Q86WZ0 1026 aa4.45□□□□□ -1.7
UBR3-206ENST00000444475 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP4.45□□□□□ -1.7
UBR3-206ENST00000444475 C17orf50Q8WW18 174 aa4.45□□□□□ -1.7
UBR3-206ENST00000444475 ARHGEF2Q92974 986 aaKnown RBP4.45□□□□□ -1.7
UBR3-206ENST00000444475 EPN3Q9H201 632 aa4.45□□□□□ -1.7
UBR3-206ENST00000444475 CDC23Q9UJX2 597 aa4.45□□□□□ -1.7
UBR3-206ENST00000444475 LINC00854A0A1B0GVQ3 168 aa4.45□□□□□ -1.7
UBR3-206ENST00000444475 PGPEP1LA6NFU8 196 aa4.45□□□□□ -1.7
UBR3-206ENST00000444475 PITPNM1O00562 1244 aa4.45□□□□□ -1.7
UBR3-206ENST00000444475 DOK2O60496 412 aa4.45□□□□□ -1.7
UBR3-206ENST00000444475 PGM3O95394 542 aa4.45□□□□□ -1.7
UBR3-206ENST00000444475 HOXD13P35453 343 aa4.45□□□□□ -1.7
UBR3-206ENST00000444475 SKIV2L2P42285 1042 aaKnown RBP4.45□□□□□ -1.7
UBR3-206ENST00000444475 LIG3P49916 1009 aa4.45□□□□□ -1.7
UBR3-206ENST00000444475 GPR85P60893 370 aa4.45□□□□□ -1.7
UBR3-206ENST00000444475 GALNT1Q10472 559 aaPredicted RBP4.45□□□□□ -1.7
UBR3-206ENST00000444475 KLF1Q13351 362 aaPredicted RBP4.45□□□□□ -1.7
UBR3-206ENST00000444475 ZNF460Q14592 562 aa4.45□□□□□ -1.7
UBR3-206ENST00000444475 PTPRNQ16849 979 aa4.45□□□□□ -1.7
UBR3-206ENST00000444475 ANKDD1AQ495B1 522 aa4.45□□□□□ -1.7
UBR3-206ENST00000444475 SV2BQ7L1I2 683 aa4.45□□□□□ -1.7
UBR3-206ENST00000444475 VWA5B2Q8N398 1253 aa4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms