RNA–Protein interactions for RNA: ENST00000441310.6

PMS1-213, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PMS1, Length 3,225 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-213ENST00000441310 BTAF1O14981 1849 aa18.5■□□□□ 0.55
PMS1-213ENST00000441310 TRIM37O94972 964 aa18.5■□□□□ 0.55
PMS1-213ENST00000441310 PLEKP08567 350 aaPredicted RBP18.5■□□□□ 0.55
PMS1-213ENST00000441310 TRIM22Q8IYM9 498 aa18.5■□□□□ 0.55
PMS1-213ENST00000441310 ENAHQ8N8S7 591 aaPredicted RBP18.5■□□□□ 0.55
PMS1-213ENST00000441310 SPAG5Q96R06 1193 aa18.5■□□□□ 0.55
PMS1-213ENST00000441310 ANKRD2Q9GZV1 360 aa18.5■□□□□ 0.55
PMS1-213ENST00000441310 EIF4E1BA6NMX2 242 aaKnown RBP18.5■□□□□ 0.55
PMS1-213ENST00000441310 PHF20L1A8MW92 1017 aa18.5■□□□□ 0.55
PMS1-213ENST00000441310 ZNF263O14978 683 aa18.5■□□□□ 0.55
PMS1-213ENST00000441310 ANP32DO95626 131 aa18.5■□□□□ 0.55
PMS1-213ENST00000441310 THEMIS2Q5TEJ8 643 aa18.5■□□□□ 0.55
PMS1-213ENST00000441310 ARFGAP2Q8N6H7 521 aa18.5■□□□□ 0.55
PMS1-213ENST00000441310 PURBQ96QR8 312 aaKnown RBP18.5■□□□□ 0.55
PMS1-213ENST00000441310 BYSLQ13895 437 aaKnown RBP18.49■□□□□ 0.55
PMS1-213ENST00000441310 CPLX4Q7Z7G2 160 aa18.49■□□□□ 0.55
PMS1-213ENST00000441310 RREB1Q92766 1687 aa18.49■□□□□ 0.55
PMS1-213ENST00000441310 MYH2Q9UKX2 1941 aa18.49■□□□□ 0.55
PMS1-213ENST00000441310 B4DLN1 442 aa18.49■□□□□ 0.55
PMS1-213ENST00000441310 USP17L8P0C7I0 530 aa18.49■□□□□ 0.55
PMS1-213ENST00000441310 IFNAR1P17181 557 aa18.49■□□□□ 0.55
PMS1-213ENST00000441310 RNASE9P60153 205 aaKnown RBP18.49■□□□□ 0.55
PMS1-213ENST00000441310 ITIH3Q06033 890 aa18.49■□□□□ 0.55
PMS1-213ENST00000441310 EMC10Q5UCC4 262 aa18.49■□□□□ 0.55
PMS1-213ENST00000441310 CCDC42Q96M95 316 aa18.49■□□□□ 0.55
PMS1-213ENST00000441310 BATF3Q9NR55 127 aa18.49■□□□□ 0.55
PMS1-213ENST00000441310 MYH13Q9UKX3 1938 aa18.49■□□□□ 0.55
PMS1-213ENST00000441310 XDHP47989 1333 aa18.49■□□□□ 0.55
PMS1-213ENST00000441310 LGALS16A8MUM7 142 aa18.49■□□□□ 0.55
PMS1-213ENST00000441310 TRAPPC3O43617 180 aa18.49■□□□□ 0.55
PMS1-213ENST00000441310 USO1O60763 962 aaKnown RBP18.49■□□□□ 0.55
PMS1-213ENST00000441310 FMNL1O95466 1100 aaPredicted RBP18.49■□□□□ 0.55
PMS1-213ENST00000441310 TCP1P17987 556 aaKnown RBP18.49■□□□□ 0.55
PMS1-213ENST00000441310 RBBP5Q15291 538 aaKnown RBP18.49■□□□□ 0.55
PMS1-213ENST00000441310 IFIT1BQ5T764 474 aaKnown RBP18.49■□□□□ 0.55
PMS1-213ENST00000441310 ZNF662Q6ZS27 426 aa18.49■□□□□ 0.55
PMS1-213ENST00000441310 IRF2BP1Q8IU81 584 aa18.49■□□□□ 0.55
PMS1-213ENST00000441310 DCP1AQ9NPI6 582 aaPredicted RBP18.49■□□□□ 0.55
PMS1-213ENST00000441310 IRAK4Q9NWZ3 460 aa18.49■□□□□ 0.55
PMS1-213ENST00000441310 MCM9Q9NXL9 1143 aa18.49■□□□□ 0.55
PMS1-213ENST00000441310 C15orf41Q9Y2V0 281 aa18.49■□□□□ 0.55
PMS1-213ENST00000441310 ANKRD33BA6NCL7 494 aa18.48■□□□□ 0.55
PMS1-213ENST00000441310 PLEKHA8P1O95397 391 aa18.48■□□□□ 0.55
PMS1-213ENST00000441310 ICA1Q05084 483 aa18.48■□□□□ 0.55
PMS1-213ENST00000441310 NBPF9Q3BBW0 867 aa18.48■□□□□ 0.55
PMS1-213ENST00000441310 PRR5LQ6MZQ0 368 aa18.48■□□□□ 0.55
PMS1-213ENST00000441310 CRACR2BQ8N4Y2 399 aaPredicted RBP18.48■□□□□ 0.55
PMS1-213ENST00000441310 ARAP2Q8WZ64 1704 aa18.48■□□□□ 0.55
PMS1-213ENST00000441310 ZSCAN10Q96SZ4 725 aaPredicted RBP18.48■□□□□ 0.55
PMS1-213ENST00000441310 IFIH1Q9BYX4 1025 aaKnown RBP18.48■□□□□ 0.55
PMS1-213ENST00000441310 QTRT2Q9H974 415 aaKnown RBP18.48■□□□□ 0.55
PMS1-213ENST00000441310 SNUPNO95149 360 aaKnown RBP18.48■□□□□ 0.55
PMS1-213ENST00000441310 RWDD2BP57060 319 aa18.48■□□□□ 0.55
PMS1-213ENST00000441310 MEA1Q16626 185 aa18.48■□□□□ 0.55
PMS1-213ENST00000441310 DHX30Q7L2E3 1194 aaKnown RBP eCLIP18.48■□□□□ 0.55
PMS1-213ENST00000441310 CASKIN2Q8WXE0 1202 aa18.48■□□□□ 0.55
PMS1-213ENST00000441310 FOXP1Q9H334 677 aaPredicted RBP18.48■□□□□ 0.55
PMS1-213ENST00000441310 TMBIM4Q9HC24 238 aa18.48■□□□□ 0.55
PMS1-213ENST00000441310 TRIM75PA6NK02 468 aa18.47■□□□□ 0.55
PMS1-213ENST00000441310 TNFRSF8P28908 595 aa18.47■□□□□ 0.55
PMS1-213ENST00000441310 PRCPP42785 496 aa18.47■□□□□ 0.55
PMS1-213ENST00000441310 KCTD19Q17RG1 926 aaPredicted RBP18.47■□□□□ 0.55
PMS1-213ENST00000441310 GKAP1Q5VSY0 366 aaPredicted RBP18.47■□□□□ 0.55
PMS1-213ENST00000441310 ZNF572Q7Z3I7 529 aaPredicted RBP18.47■□□□□ 0.55
PMS1-213ENST00000441310 CD302Q8IX05 232 aa18.47■□□□□ 0.55
PMS1-213ENST00000441310 RPGRQ92834 1020 aaKnown RBP18.47■□□□□ 0.55
PMS1-213ENST00000441310 V9GY48 417 aaPredicted RBP18.47■□□□□ 0.55
PMS1-213ENST00000441310 CICQ96RK0 1608 aaPredicted RBP18.47■□□□□ 0.55
PMS1-213ENST00000441310 GCOM1H8Y6P7 765 aaPredicted RBP18.47■□□□□ 0.55
PMS1-213ENST00000441310 MYZAPP0CAP1 466 aa18.47■□□□□ 0.55
PMS1-213ENST00000441310 SSR1P43307 286 aaKnown RBP18.47■□□□□ 0.55
PMS1-213ENST00000441310 HLTFQ14527 1009 aaKnown RBP eCLIP18.47■□□□□ 0.551e-6■■■□□ 16.5
PMS1-213ENST00000441310 SEC23AQ15436 765 aa18.47■□□□□ 0.55
PMS1-213ENST00000441310 TBC1D1Q86TI0 1168 aaPredicted RBP18.47■□□□□ 0.55
PMS1-213ENST00000441310 WASF1Q92558 559 aa18.47■□□□□ 0.55
PMS1-213ENST00000441310 RAPGEF5Q92565 580 aa18.47■□□□□ 0.55
PMS1-213ENST00000441310 CRNKL1Q9BZJ0 848 aaKnown RBP18.47■□□□□ 0.55
PMS1-213ENST00000441310 SPATA31A6Q5VVP1 1343 aa18.47■□□□□ 0.55
PMS1-213ENST00000441310 TYW1BQ6NUM6 668 aa18.47■□□□□ 0.55
PMS1-213ENST00000441310 CCT6BQ92526 530 aa18.47■□□□□ 0.55
PMS1-213ENST00000441310 DYNLL2Q96FJ2 89 aa18.47■□□□□ 0.55
PMS1-213ENST00000441310 KRT12Q99456 494 aa18.47■□□□□ 0.55
PMS1-213ENST00000441310 TSGA10Q9BZW7 698 aa18.47■□□□□ 0.55
PMS1-213ENST00000441310 EBF2Q9HAK2 575 aa18.47■□□□□ 0.55
PMS1-213ENST00000441310 GDF3Q9NR23 364 aa18.47■□□□□ 0.55
PMS1-213ENST00000441310 DOCK2Q92608 1830 aa18.46■□□□□ 0.55
PMS1-213ENST00000441310 DNAJC8O75937 253 aaPredicted RBP18.46■□□□□ 0.55
PMS1-213ENST00000441310 UPP2O95045 317 aa18.46■□□□□ 0.55
PMS1-213ENST00000441310 CDC37Q16543 378 aaPredicted RBP18.46■□□□□ 0.55
PMS1-213ENST00000441310 LACTB2Q53H82 288 aaPredicted RBP18.46■□□□□ 0.55
PMS1-213ENST00000441310 CCDC170Q8IYT3 715 aa18.46■□□□□ 0.55
PMS1-213ENST00000441310 CCDC63Q8NA47 563 aa18.46■□□□□ 0.55
PMS1-213ENST00000441310 CCDC47Q96A33 483 aaKnown RBP18.46■□□□□ 0.55
PMS1-213ENST00000441310 SH2D4AQ9H788 454 aa18.46■□□□□ 0.55
PMS1-213ENST00000441310 SH3BP1Q9Y3L3 701 aa18.46■□□□□ 0.55
PMS1-213ENST00000441310 BCORQ6W2J9 1755 aa18.46■□□□□ 0.55
PMS1-213ENST00000441310 ALS2CR12Q96Q35 445 aa18.46■□□□□ 0.55
PMS1-213ENST00000441310 BUB1O43683 1085 aa18.45■□□□□ 0.54
PMS1-213ENST00000441310 DIAPH2O60879 1101 aa18.45■□□□□ 0.54
PMS1-213ENST00000441310 PMS1P54277 932 aaKnown RBP18.45■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms