RNA–Protein interactions for RNA: ENST00000440048.1

VARS-217, Transcript of valyl-tRNA synthetase, humanhuman

TSL 1 (best)

Gene VARS, Length 804 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-217ENST00000440048 SEZ6LQ9BYH1 1024 aa27.12■■□□□ 1.93
VARS-217ENST00000440048 UBE2OQ9C0C9 1292 aaKnown RBP27.12■■□□□ 1.93
VARS-217ENST00000440048 ALDH8A1Q9H2A2 487 aaPredicted RBP27.12■■□□□ 1.93
VARS-217ENST00000440048 GGPS1O95749 300 aa27.11■■□□□ 1.93
VARS-217ENST00000440048 UBA1P22314 1058 aaKnown RBP27.11■■□□□ 1.93
VARS-217ENST00000440048 ITGB8P26012 769 aa27.11■■□□□ 1.93
VARS-217ENST00000440048 STK3Q13188 491 aa27.11■■□□□ 1.93
VARS-217ENST00000440048 SEMA3FQ13275 785 aa27.11■■□□□ 1.93
VARS-217ENST00000440048 C8orf34Q49A92 452 aa27.11■■□□□ 1.93
VARS-217ENST00000440048 CELF3Q5SZQ8 465 aaKnown RBP27.11■■□□□ 1.93
VARS-217ENST00000440048 MYSM1Q5VVJ2 828 aa27.11■■□□□ 1.93
VARS-217ENST00000440048 BADQ92934 168 aa27.11■■□□□ 1.93
VARS-217ENST00000440048 TBX21Q9UL17 535 aa27.11■■□□□ 1.93
VARS-217ENST00000440048 SZT2Q5T011 3432 aa27.1■■□□□ 1.93
VARS-217ENST00000440048 SPATA31C2B4DYI2 1134 aa27.1■■□□□ 1.93
VARS-217ENST00000440048 TLR3O15455 904 aaKnown RBP27.1■■□□□ 1.93
VARS-217ENST00000440048 SORBS3O60504 671 aa27.1■■□□□ 1.93
VARS-217ENST00000440048 CD4P01730 458 aa27.1■■□□□ 1.93
VARS-217ENST00000440048 PPTC7Q8NI37 304 aa27.1■■□□□ 1.93
VARS-217ENST00000440048 GLT8D2Q9H1C3 349 aa27.1■■□□□ 1.93
VARS-217ENST00000440048 DOCK5Q9H7D0 1870 aa27.1■■□□□ 1.93
VARS-217ENST00000440048 FIBPO43427 364 aa27.09■■□□□ 1.93
VARS-217ENST00000440048 RAG1P15918 1043 aa27.09■■□□□ 1.93
VARS-217ENST00000440048 NBPF20Q3BBV1 942 aa27.09■■□□□ 1.93
VARS-217ENST00000440048 TDHQ8IZJ6 230 aa27.09■■□□□ 1.93
VARS-217ENST00000440048 EHMT1Q9H9B1 1298 aa27.09■■□□□ 1.93
VARS-217ENST00000440048 LAMA3Q16787 3333 aa27.08■■□□□ 1.93
VARS-217ENST00000440048 FOSP01100 380 aaPredicted RBP27.08■■□□□ 1.93
VARS-217ENST00000440048 DGKDQ16760 1214 aa27.08■■□□□ 1.93
VARS-217ENST00000440048 NLRX1Q86UT6 975 aa27.08■■□□□ 1.93
VARS-217ENST00000440048 PGBD1Q96JS3 809 aa27.08■■□□□ 1.93
VARS-217ENST00000440048 SPATA33Q96N06 139 aa27.08■■□□□ 1.93
VARS-217ENST00000440048 TRPV6Q9H1D0 765 aa27.08■■□□□ 1.93
VARS-217ENST00000440048 BCAS3Q9H6U6 928 aa27.08■■□□□ 1.93
VARS-217ENST00000440048 TMEM260Q9NX78 707 aa27.08■■□□□ 1.93
VARS-217ENST00000440048 TPCN1Q9ULQ1 816 aa27.08■■□□□ 1.93
VARS-217ENST00000440048 ESYT2A0FGR8 921 aa27.07■■□□□ 1.92
VARS-217ENST00000440048 CPLX1O14810 134 aa27.07■■□□□ 1.92
VARS-217ENST00000440048 CLK2P49760 499 aaKnown RBP27.07■■□□□ 1.92
VARS-217ENST00000440048 AK2P54819 239 aa27.07■■□□□ 1.92
VARS-217ENST00000440048 HSDL1Q3SXM5 330 aa27.07■■□□□ 1.92
VARS-217ENST00000440048 CCDC12Q8WUD4 166 aaPredicted RBP27.07■■□□□ 1.92
VARS-217ENST00000440048 PPP1R13LQ8WUF5 828 aa27.07■■□□□ 1.92
VARS-217ENST00000440048 ANO3Q9BYT9 981 aa27.07■■□□□ 1.92
VARS-217ENST00000440048 ZMYND12Q9H0C1 365 aa27.07■■□□□ 1.92
VARS-217ENST00000440048 MLXIPQ9HAP2 919 aa27.07■■□□□ 1.92
VARS-217ENST00000440048 UBIAD1Q9Y5Z9 338 aa27.07■■□□□ 1.92
VARS-217ENST00000440048 B4GALT4O60513 344 aa27.06■■□□□ 1.92
VARS-217ENST00000440048 HOXD8P13378 290 aaPredicted RBP27.06■■□□□ 1.92
VARS-217ENST00000440048 ITGB5P18084 799 aa27.06■■□□□ 1.92
VARS-217ENST00000440048 SSRP1Q08945 709 aaKnown RBP27.06■■□□□ 1.92
VARS-217ENST00000440048 AP3B2Q13367 1082 aa27.06■■□□□ 1.92
VARS-217ENST00000440048 NEDD9Q14511 834 aa27.06■■□□□ 1.92
VARS-217ENST00000440048 ANKRD1Q15327 319 aa27.06■■□□□ 1.92
VARS-217ENST00000440048 TRIM22Q8IYM9 498 aa27.06■■□□□ 1.92
VARS-217ENST00000440048 KAT2BQ92831 832 aa27.06■■□□□ 1.92
VARS-217ENST00000440048 GPRASP2Q96D09 838 aa27.06■■□□□ 1.92
VARS-217ENST00000440048 ADAMTS3O15072 1205 aa27.05■■□□□ 1.92
VARS-217ENST00000440048 TIMP1P01033 207 aa27.05■■□□□ 1.92
VARS-217ENST00000440048 LRIT3Q3SXY7 679 aa27.05■■□□□ 1.92
VARS-217ENST00000440048 FAM47CQ5HY64 1035 aa27.05■■□□□ 1.92
VARS-217ENST00000440048 NFRKBQ6P4R8 1299 aa27.05■■□□□ 1.92
VARS-217ENST00000440048 CPLX2Q6PUV4 134 aaKnown RBP27.05■■□□□ 1.92
VARS-217ENST00000440048 SLKQ9H2G2 1235 aaPredicted RBP27.05■■□□□ 1.92
VARS-217ENST00000440048 C6orf50Q9HD87 102 aa27.05■■□□□ 1.92
VARS-217ENST00000440048 PPFIA4O75335 1185 aa27.04■■□□□ 1.92
VARS-217ENST00000440048 CHMP4BP1P59074 171 aa27.04■■□□□ 1.92
VARS-217ENST00000440048 SCRN1Q12765 414 aa27.04■■□□□ 1.92
VARS-217ENST00000440048 JAKMIP3Q5VZ66 844 aa27.04■■□□□ 1.92
VARS-217ENST00000440048 METTL7BQ6UX53 244 aa27.04■■□□□ 1.92
VARS-217ENST00000440048 CYFIP1Q7L576 1253 aa27.04■■□□□ 1.92
VARS-217ENST00000440048 SENP7Q9BQF6 1050 aa27.04■■□□□ 1.92
VARS-217ENST00000440048 JADE2Q9NQC1 790 aa27.04■■□□□ 1.92
VARS-217ENST00000440048 TRMT13Q9NUP7 481 aaKnown RBP27.04■■□□□ 1.92
VARS-217ENST00000440048 VPS54Q9P1Q0 977 aa27.04■■□□□ 1.92
VARS-217ENST00000440048 PFKFB2O60825 505 aa27.03■■□□□ 1.92
VARS-217ENST00000440048 ZNF286BP0CG31 522 aa27.03■■□□□ 1.92
VARS-217ENST00000440048 NEK4P51957 841 aa27.03■■□□□ 1.92
VARS-217ENST00000440048 CCDC148Q8NFR7 591 aa27.03■■□□□ 1.92
VARS-217ENST00000440048 CDHR1Q96JP9 859 aa27.03■■□□□ 1.92
VARS-217ENST00000440048 ATP9AO75110 1047 aa27.02■■□□□ 1.92
VARS-217ENST00000440048 DEXIO95424 95 aa27.02■■□□□ 1.92
VARS-217ENST00000440048 F2P00734 622 aa27.02■■□□□ 1.92
VARS-217ENST00000440048 GNA11P29992 359 aa27.02■■□□□ 1.92
VARS-217ENST00000440048 SREBF1P36956 1147 aa27.02■■□□□ 1.92
VARS-217ENST00000440048 PTPN11Q06124 597 aaPredicted RBP27.02■■□□□ 1.92
VARS-217ENST00000440048 MTMR1Q13613 665 aa27.02■■□□□ 1.92
VARS-217ENST00000440048 GPR153Q6NV75 609 aa27.02■■□□□ 1.92
VARS-217ENST00000440048 PPP1R12CQ9BZL4 782 aa27.02■■□□□ 1.92
VARS-217ENST00000440048 SH3GLB2Q9NR46 395 aa27.02■■□□□ 1.92
VARS-217ENST00000440048 KCNA2P16389 499 aa27.01■■□□□ 1.91
VARS-217ENST00000440048 PSEN2P49810 448 aa27.01■■□□□ 1.91
VARS-217ENST00000440048 MFSD5Q6N075 450 aa27.01■■□□□ 1.91
VARS-217ENST00000440048 REXO1Q8N1G1 1221 aaKnown RBP27.01■■□□□ 1.91
VARS-217ENST00000440048 MXRA8Q9BRK3 442 aa27.01■■□□□ 1.91
VARS-217ENST00000440048 LAMA2P24043 3122 aaKnown RBP27■■□□□ 1.91
VARS-217ENST00000440048 NOP56O00567 594 aaKnown RBP27■■□□□ 1.91
VARS-217ENST00000440048 SUPT20HL2P0C7V6 817 aa27■■□□□ 1.91
VARS-217ENST00000440048 CYP2C18P33260 490 aa27■■□□□ 1.91
VARS-217ENST00000440048 FPGSQ05932 587 aa27■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms