RNA–Protein interactions for RNA: ENST00000439117.6

TSC2-206, Transcript of TSC complex subunit 2, humanhuman

TSL 1 (best)

Gene TSC2, Length 5,073 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC2-206ENST00000439117 NOD1Q9Y239 953 aa16.28■□□□□ 0.2
TSC2-206ENST00000439117 GLE1Q53GS7 698 aaKnown RBP16.28■□□□□ 0.2
TSC2-206ENST00000439117 TTC16Q8NEE8 873 aa16.28■□□□□ 0.2
TSC2-206ENST00000439117 SPDL1Q96EA4 605 aa16.28■□□□□ 0.2
TSC2-206ENST00000439117 MASTLQ96GX5 879 aa16.28■□□□□ 0.2
TSC2-206ENST00000439117 PIH1D3Q9NQM4 214 aaKnown RBP16.28■□□□□ 0.2
TSC2-206ENST00000439117 ATP8A1Q9Y2Q0 1164 aa16.28■□□□□ 0.2
TSC2-206ENST00000439117 SETD1BQ9UPS6 1966 aaKnown RBP16.28■□□□□ 0.2
TSC2-206ENST00000439117 KDM3AQ9Y4C1 1321 aa16.28■□□□□ 0.2
TSC2-206ENST00000439117 IFNB1P01574 187 aa16.28■□□□□ 0.2
TSC2-206ENST00000439117 HSPA6P17066 643 aa16.28■□□□□ 0.2
TSC2-206ENST00000439117 HAUS8Q9BT25 410 aa16.28■□□□□ 0.2
TSC2-206ENST00000439117 COA1Q9GZY4 146 aa16.28■□□□□ 0.2
TSC2-206ENST00000439117 ARMCX3Q9UH62 379 aaPredicted RBP16.28■□□□□ 0.2
TSC2-206ENST00000439117 RIMBP3CA6NJZ7 1639 aa16.28■□□□□ 0.2
TSC2-206ENST00000439117 RIMBP3BA6NNM3 1639 aa16.28■□□□□ 0.2
TSC2-206ENST00000439117 RIMBP3Q9UFD9 1639 aa16.28■□□□□ 0.2
TSC2-206ENST00000439117 ATP5HO75947 161 aa16.28■□□□□ 0.2
TSC2-206ENST00000439117 ARHGAP18Q8N392 663 aa16.28■□□□□ 0.2
TSC2-206ENST00000439117 NEK9Q8TD19 979 aa16.28■□□□□ 0.2
TSC2-206ENST00000439117 TUBGCP2Q9BSJ2 902 aa16.28■□□□□ 0.2
TSC2-206ENST00000439117 PAGR1Q9BTK6 254 aa16.28■□□□□ 0.2
TSC2-206ENST00000439117 RNF26Q9BY78 433 aaPredicted RBP16.28■□□□□ 0.2
TSC2-206ENST00000439117 STOML1Q9UBI4 398 aa16.28■□□□□ 0.2
TSC2-206ENST00000439117 PCDHA12Q9UN75 941 aa16.28■□□□□ 0.2
TSC2-206ENST00000439117 DLC1Q96QB1 1528 aa16.28■□□□□ 0.2
TSC2-206ENST00000439117 RASSF7Q02833 373 aa16.27■□□□□ 0.2
TSC2-206ENST00000439117 TMTC3Q6ZXV5 915 aa16.27■□□□□ 0.2
TSC2-206ENST00000439117 TPH2Q8IWU9 490 aa16.27■□□□□ 0.2
TSC2-206ENST00000439117 NME8Q8N427 588 aa16.27■□□□□ 0.2
TSC2-206ENST00000439117 PCDHA1Q9Y5I3 950 aa16.27■□□□□ 0.2
TSC2-206ENST00000439117 CLIC4Q9Y696 253 aa16.27■□□□□ 0.2
TSC2-206ENST00000439117 CDHR2Q9BYE9 1310 aa16.27■□□□□ 0.2
TSC2-206ENST00000439117 RPN1P04843 607 aaKnown RBP16.27■□□□□ 0.2
TSC2-206ENST00000439117 C2orf54Q08AI8 447 aa16.27■□□□□ 0.2
TSC2-206ENST00000439117 ASPRV1Q53RT3 343 aa16.27■□□□□ 0.2
TSC2-206ENST00000439117 CLEC17AQ6ZS10 378 aa16.27■□□□□ 0.2
TSC2-206ENST00000439117 GJD4Q96KN9 370 aaPredicted RBP16.27■□□□□ 0.2
TSC2-206ENST00000439117 GINS2Q9Y248 185 aa16.27■□□□□ 0.2
TSC2-206ENST00000439117 OR52Z1P0C646 297 aa16.27■□□□□ 0.2
TSC2-206ENST00000439117 CUL1Q13616 776 aa16.27■□□□□ 0.2
TSC2-206ENST00000439117 MCF2L2Q86YR7 1114 aa16.27■□□□□ 0.2
TSC2-206ENST00000439117 MAGOHBQ96A72 148 aaKnown RBP16.27■□□□□ 0.2
TSC2-206ENST00000439117 PBKQ96KB5 322 aa16.27■□□□□ 0.2
TSC2-206ENST00000439117 PABPC4Q13310 644 aaKnown RBP eCLIP16.27■□□□□ 0.192e-6■■■□□ 15.9
TSC2-206ENST00000439117 TMCO4Q5TGY1 634 aa16.27■□□□□ 0.19
TSC2-206ENST00000439117 DHX36Q9H2U1 1008 aaKnown RBP16.27■□□□□ 0.19
TSC2-206ENST00000439117 TBC1D7Q9P0N9 293 aa16.27■□□□□ 0.19
TSC2-206ENST00000439117 PTPRMP28827 1452 aa16.27■□□□□ 0.19
TSC2-206ENST00000439117 JCADQ9P266 1359 aa16.27■□□□□ 0.19
TSC2-206ENST00000439117 TTLL1O95922 423 aa16.26■□□□□ 0.19
TSC2-206ENST00000439117 ZSCAN20P17040 1043 aaPredicted RBP16.26■□□□□ 0.19
TSC2-206ENST00000439117 POLR2FP61218 127 aaKnown RBP16.26■□□□□ 0.19
TSC2-206ENST00000439117 SATB1Q01826 763 aa16.26■□□□□ 0.19
TSC2-206ENST00000439117 DEUP1Q05D60 604 aa16.26■□□□□ 0.19
TSC2-206ENST00000439117 TTLL6Q8N841 843 aa16.26■□□□□ 0.19
TSC2-206ENST00000439117 ISCA1Q9BUE6 129 aa16.26■□□□□ 0.19
TSC2-206ENST00000439117 KANSL2Q9H9L4 492 aa16.26■□□□□ 0.19
TSC2-206ENST00000439117 MAGEF1Q9HAY2 307 aa16.26■□□□□ 0.19
TSC2-206ENST00000439117 RAD17O75943 681 aa16.26■□□□□ 0.19
TSC2-206ENST00000439117 NDUFA10O95299 355 aa16.26■□□□□ 0.19
TSC2-206ENST00000439117 MECOMQ03112 1051 aa16.26■□□□□ 0.19
TSC2-206ENST00000439117 CASC4Q6P4E1 433 aa16.26■□□□□ 0.19
TSC2-206ENST00000439117 MRPL44Q9H9J2 332 aaKnown RBP16.26■□□□□ 0.19
TSC2-206ENST00000439117 METTL14Q9HCE5 456 aaKnown RBP16.26■□□□□ 0.19
TSC2-206ENST00000439117 ZCCHC17Q9NP64 241 aaKnown RBP16.26■□□□□ 0.19
TSC2-206ENST00000439117 SOWAHDA6NJG2 315 aa16.26■□□□□ 0.19
TSC2-206ENST00000439117 GCNT3O95395 438 aa16.26■□□□□ 0.19
TSC2-206ENST00000439117 CA8P35219 290 aa16.26■□□□□ 0.19
TSC2-206ENST00000439117 PDE6CP51160 858 aa16.26■□□□□ 0.19
TSC2-206ENST00000439117 LMNB2Q03252 620 aa16.26■□□□□ 0.19
TSC2-206ENST00000439117 GOLGA8FQ08AF8 430 aa16.26■□□□□ 0.19
TSC2-206ENST00000439117 GOLGA8DPQ0D2H9 430 aa16.26■□□□□ 0.19
TSC2-206ENST00000439117 ACRBPQ8NEB7 543 aa16.26■□□□□ 0.19
TSC2-206ENST00000439117 RSAD2Q8WXG1 361 aa16.26■□□□□ 0.19
TSC2-206ENST00000439117 AMNQ9BXJ7 453 aa16.26■□□□□ 0.19
TSC2-206ENST00000439117 FGFR1OP2Q9NVK5 253 aa16.26■□□□□ 0.19
TSC2-206ENST00000439117 KCNG1Q9UIX4 513 aa16.26■□□□□ 0.19
TSC2-206ENST00000439117 SUFUQ9UMX1 484 aa16.26■□□□□ 0.19
TSC2-206ENST00000439117 GOLGA8QA0A0J9YX86 632 aa16.26■□□□□ 0.19
TSC2-206ENST00000439117 TESPA1A2RU30 521 aaPredicted RBP16.26■□□□□ 0.19
TSC2-206ENST00000439117 GOLGA8OA6NCC3 632 aa16.26■□□□□ 0.19
TSC2-206ENST00000439117 GOLGA8NF8WBI6 632 aa16.26■□□□□ 0.19
TSC2-206ENST00000439117 FOSP01100 380 aaPredicted RBP16.26■□□□□ 0.19
TSC2-206ENST00000439117 MCAMP43121 646 aa16.26■□□□□ 0.19
TSC2-206ENST00000439117 VPS41P49754 854 aa16.26■□□□□ 0.19
TSC2-206ENST00000439117 ARHGAP44Q17R89 818 aa16.26■□□□□ 0.19
TSC2-206ENST00000439117 ARHGEF16Q5VV41 709 aa16.26■□□□□ 0.19
TSC2-206ENST00000439117 EPS15L1Q9UBC2 864 aa16.26■□□□□ 0.19
TSC2-206ENST00000439117 ATF5Q9Y2D1 282 aaPredicted RBP16.26■□□□□ 0.19
TSC2-206ENST00000439117 PDCD2Q16342 344 aaPredicted RBP16.25■□□□□ 0.19
TSC2-206ENST00000439117 C6orf118Q5T5N4 469 aa16.25■□□□□ 0.19
TSC2-206ENST00000439117 RTKN2Q8IZC4 609 aa16.25■□□□□ 0.19
TSC2-206ENST00000439117 CLIC6Q96NY7 704 aa16.25■□□□□ 0.19
TSC2-206ENST00000439117 OSBPL5Q9H0X9 879 aaPredicted RBP16.25■□□□□ 0.19
TSC2-206ENST00000439117 TECP42680 631 aa16.25■□□□□ 0.19
TSC2-206ENST00000439117 CDAN1Q8IWY9 1227 aa16.25■□□□□ 0.19
TSC2-206ENST00000439117 PARP9Q8IXQ6 854 aa16.25■□□□□ 0.19
TSC2-206ENST00000439117 LRRC7Q96NW7 1537 aa16.25■□□□□ 0.19
TSC2-206ENST00000439117 CFAP73A6NFT4 308 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms