RNA–Protein interactions for RNA: ENST00000438964.6

ACTN1-204, Transcript of actinin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene ACTN1, Length 3,043 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-204ENST00000438964 SLCO1A2P46721 670 aa14.71□□□□□ -0.05
ACTN1-204ENST00000438964 TRIM51Q9BSJ1 452 aa14.71□□□□□ -0.05
ACTN1-204ENST00000438964 SLC12A6Q9UHW9 1150 aa14.71□□□□□ -0.05
ACTN1-204ENST00000438964 LRP6O75581 1613 aa14.71□□□□□ -0.05
ACTN1-204ENST00000438964 A8MUI8 341 aa14.71□□□□□ -0.05
ACTN1-204ENST00000438964 CTNND1O60716 968 aaKnown RBP14.71□□□□□ -0.05
ACTN1-204ENST00000438964 ECHS1P30084 290 aa14.71□□□□□ -0.05
ACTN1-204ENST00000438964 IFFO1Q0D2I5 559 aa14.71□□□□□ -0.05
ACTN1-204ENST00000438964 LLGL1Q15334 1064 aa14.71□□□□□ -0.05
ACTN1-204ENST00000438964 PFKFB3Q16875 520 aaPredicted RBP14.71□□□□□ -0.05
ACTN1-204ENST00000438964 HGSNATQ68CP4 663 aa14.71□□□□□ -0.05
ACTN1-204ENST00000438964 KIF2BQ8N4N8 673 aa14.71□□□□□ -0.05
ACTN1-204ENST00000438964 NSMCE1Q8WV22 266 aa14.71□□□□□ -0.05
ACTN1-204ENST00000438964 DHTKD1Q96HY7 919 aaPredicted RBP14.71□□□□□ -0.05
ACTN1-204ENST00000438964 LSM14BQ9BX40 385 aaKnown RBP14.71□□□□□ -0.05
ACTN1-204ENST00000438964 MLXIPLQ9NP71 852 aa14.71□□□□□ -0.05
ACTN1-204ENST00000438964 ZBTB1Q9Y2K1 713 aa14.71□□□□□ -0.05
ACTN1-204ENST00000438964 ENO4A6NNW6 628 aa14.71□□□□□ -0.06
ACTN1-204ENST00000438964 TTI1O43156 1089 aa14.71□□□□□ -0.06
ACTN1-204ENST00000438964 ACTN1P12814 892 aa14.71□□□□□ -0.06
ACTN1-204ENST00000438964 FGFR2P21802 821 aa14.71□□□□□ -0.06
ACTN1-204ENST00000438964 PRPF4BQ13523 1007 aaKnown RBP14.71□□□□□ -0.06
ACTN1-204ENST00000438964 CCDC38Q502W7 563 aa14.71□□□□□ -0.06
ACTN1-204ENST00000438964 GIGYF2Q6Y7W6 1299 aaKnown RBP14.71□□□□□ -0.06
ACTN1-204ENST00000438964 RETREG2Q8NC44 543 aa14.71□□□□□ -0.06
ACTN1-204ENST00000438964 TAF1DQ9H5J8 278 aaPredicted RBP14.71□□□□□ -0.06
ACTN1-204ENST00000438964 NOD2Q9HC29 1040 aa14.71□□□□□ -0.06
ACTN1-204ENST00000438964 THRAP3Q9Y2W1 955 aaKnown RBP14.71□□□□□ -0.06
ACTN1-204ENST00000438964 GRID2IPA4D2P6 1211 aa14.7□□□□□ -0.06
ACTN1-204ENST00000438964 FOXO6A8MYZ6 492 aa14.7□□□□□ -0.06
ACTN1-204ENST00000438964 SHBGP04278 402 aa14.7□□□□□ -0.06
ACTN1-204ENST00000438964 KCNMA1Q12791 1236 aa14.7□□□□□ -0.06
ACTN1-204ENST00000438964 ZNF662Q6ZS27 426 aa14.7□□□□□ -0.06
ACTN1-204ENST00000438964 DYNLL2Q96FJ2 89 aa14.7□□□□□ -0.06
ACTN1-204ENST00000438964 FGFBP2Q9BYJ0 223 aa14.7□□□□□ -0.06
ACTN1-204ENST00000438964 PCDHA6Q9UN73 950 aa14.7□□□□□ -0.06
ACTN1-204ENST00000438964 PCDHA8Q9Y5H6 950 aa14.7□□□□□ -0.06
ACTN1-204ENST00000438964 BICDL2A1A5D9 508 aa14.7□□□□□ -0.06
ACTN1-204ENST00000438964 USP17L3A6NCW0 530 aa14.7□□□□□ -0.06
ACTN1-204ENST00000438964 USP17L4A6NCW7 530 aa14.7□□□□□ -0.06
ACTN1-204ENST00000438964 SART1O43290 800 aaKnown RBP14.7□□□□□ -0.06
ACTN1-204ENST00000438964 C21orf2O43822 256 aa14.7□□□□□ -0.06
ACTN1-204ENST00000438964 PPP2R2AP63151 447 aa14.7□□□□□ -0.06
ACTN1-204ENST00000438964 WLSQ5T9L3 541 aa14.7□□□□□ -0.06
ACTN1-204ENST00000438964 PDXDC1Q6P996 788 aa14.7□□□□□ -0.06
ACTN1-204ENST00000438964 USP17L1Q7RTZ2 530 aa14.7□□□□□ -0.06
ACTN1-204ENST00000438964 YTHDF3Q7Z739 585 aaKnown RBP14.7□□□□□ -0.06
ACTN1-204ENST00000438964 TEX11Q8IYF3 940 aa14.7□□□□□ -0.06
ACTN1-204ENST00000438964 INPP4AQ96PE3 977 aaPredicted RBP14.7□□□□□ -0.06
ACTN1-204ENST00000438964 FAM167BQ9BTA0 163 aa14.7□□□□□ -0.06
ACTN1-204ENST00000438964 A1CFQ9NQ94 594 aaKnown RBP14.7□□□□□ -0.06
ACTN1-204ENST00000438964 NR2E1Q9Y466 385 aa14.7□□□□□ -0.06
ACTN1-204ENST00000438964 POTEMA6NI47 508 aa14.69□□□□□ -0.06
ACTN1-204ENST00000438964 MYMKA6NI61 221 aa14.69□□□□□ -0.06
ACTN1-204ENST00000438964 F8W031 263 aaPredicted RBP14.69□□□□□ -0.06
ACTN1-204ENST00000438964 GCKP35557 465 aa14.69□□□□□ -0.06
ACTN1-204ENST00000438964 ELF3P78545 371 aaPredicted RBP14.69□□□□□ -0.06
ACTN1-204ENST00000438964 KCNB1Q14721 858 aa14.69□□□□□ -0.06
ACTN1-204ENST00000438964 SLC35G1Q2M3R5 365 aa14.69□□□□□ -0.06
ACTN1-204ENST00000438964 GKAP1Q5VSY0 366 aaPredicted RBP14.69□□□□□ -0.06
ACTN1-204ENST00000438964 USP38Q8NB14 1042 aa14.69□□□□□ -0.06
ACTN1-204ENST00000438964 MGARPQ8TDB4 240 aa14.69□□□□□ -0.06
ACTN1-204ENST00000438964 TAF4BQ92750 862 aa14.69□□□□□ -0.06
ACTN1-204ENST00000438964 TRIM6Q9C030 488 aaPredicted RBP14.69□□□□□ -0.06
ACTN1-204ENST00000438964 ZHX3Q9H4I2 956 aa14.69□□□□□ -0.06
ACTN1-204ENST00000438964 TCP11L1Q9NUJ3 509 aa14.69□□□□□ -0.06
ACTN1-204ENST00000438964 FBXO3Q9UK99 471 aa14.69□□□□□ -0.06
ACTN1-204ENST00000438964 STK38LQ9Y2H1 464 aa14.69□□□□□ -0.06
ACTN1-204ENST00000438964 H0YGN5 161 aa14.69□□□□□ -0.06
ACTN1-204ENST00000438964 CAND2O75155 1236 aa14.69□□□□□ -0.06
ACTN1-204ENST00000438964 PRLRP16471 622 aa14.69□□□□□ -0.06
ACTN1-204ENST00000438964 GNAT2P19087 354 aa14.69□□□□□ -0.06
ACTN1-204ENST00000438964 FAM83BQ5T0W9 1011 aa14.69□□□□□ -0.06
ACTN1-204ENST00000438964 ZNF572Q7Z3I7 529 aaPredicted RBP14.69□□□□□ -0.06
ACTN1-204ENST00000438964 SPATS2Q86XZ4 545 aaKnown RBP14.69□□□□□ -0.06
ACTN1-204ENST00000438964 FAM114A1Q8IWE2 563 aa14.69□□□□□ -0.06
ACTN1-204ENST00000438964 KCNV2Q8TDN2 545 aa14.69□□□□□ -0.06
ACTN1-204ENST00000438964 SPDL1Q96EA4 605 aa14.69□□□□□ -0.06
ACTN1-204ENST00000438964 ELAC2Q9BQ52 826 aaKnown RBP14.69□□□□□ -0.06
ACTN1-204ENST00000438964 NUDT12Q9BQG2 462 aa14.69□□□□□ -0.06
ACTN1-204ENST00000438964 KIF9Q9HAQ2 790 aa14.69□□□□□ -0.06
ACTN1-204ENST00000438964 RBM28Q9NW13 759 aaKnown RBP14.69□□□□□ -0.06
ACTN1-204ENST00000438964 TMOD3Q9NYL9 352 aa14.69□□□□□ -0.06
ACTN1-204ENST00000438964 STX8Q9UNK0 236 aa14.69□□□□□ -0.06
ACTN1-204ENST00000438964 NFS1Q9Y697 457 aa14.69□□□□□ -0.06
ACTN1-204ENST00000438964 TRAF5O00463 557 aa14.68□□□□□ -0.06
ACTN1-204ENST00000438964 ATP6V1G2O95670 118 aa14.68□□□□□ -0.06
ACTN1-204ENST00000438964 ZSCAN29Q8IWY8 852 aaPredicted RBP14.68□□□□□ -0.06
ACTN1-204ENST00000438964 SLC44A5Q8NCS7 719 aa14.68□□□□□ -0.06
ACTN1-204ENST00000438964 ZNF384Q8TF68 577 aa14.68□□□□□ -0.06
ACTN1-204ENST00000438964 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.68□□□□□ -0.067e-7■■■□□ 15.2
ACTN1-204ENST00000438964 NID2Q14112 1375 aa14.68□□□□□ -0.06
ACTN1-204ENST00000438964 PDE8AO60658 829 aa14.68□□□□□ -0.06
ACTN1-204ENST00000438964 ADCY1Q08828 1119 aa14.68□□□□□ -0.06
ACTN1-204ENST00000438964 BIRC2Q13490 618 aa14.68□□□□□ -0.06
ACTN1-204ENST00000438964 LRRC14Q15048 493 aa14.68□□□□□ -0.06
ACTN1-204ENST00000438964 GLE1Q53GS7 698 aaKnown RBP14.68□□□□□ -0.06
ACTN1-204ENST00000438964 SFMBT2Q5VUG0 894 aa14.68□□□□□ -0.06
ACTN1-204ENST00000438964 SPICE1Q8N0Z3 855 aa14.68□□□□□ -0.06
ACTN1-204ENST00000438964 PANK4Q9NVE7 773 aa14.68□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms