RNA–Protein interactions for RNA: ENST00000434424.5

PTPRK-212, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 3

Gene PTPRK, Length 555 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-212ENST00000434424 CHST12Q9NRB3 414 aa9.28□□□□□ -0.92
PTPRK-212ENST00000434424 B4GALT6Q9UBX8 382 aa9.28□□□□□ -0.92
PTPRK-212ENST00000434424 KCNH3Q9ULD8 1083 aa9.28□□□□□ -0.92
PTPRK-212ENST00000434424 TPX2Q9ULW0 747 aaKnown RBP9.28□□□□□ -0.92
PTPRK-212ENST00000434424 PLB1Q6P1J6 1458 aa9.28□□□□□ -0.92
PTPRK-212ENST00000434424 STXBP3O00186 592 aa9.27□□□□□ -0.93
PTPRK-212ENST00000434424 TRAF5O00463 557 aa9.27□□□□□ -0.93
PTPRK-212ENST00000434424 MEIS1O00470 390 aa9.27□□□□□ -0.93
PTPRK-212ENST00000434424 CYP26A1O43174 497 aa9.27□□□□□ -0.93
PTPRK-212ENST00000434424 PRAMEF1O95521 474 aa9.27□□□□□ -0.93
PTPRK-212ENST00000434424 CD3EP07766 207 aa9.27□□□□□ -0.93
PTPRK-212ENST00000434424 TCIRG1Q13488 830 aa9.27□□□□□ -0.93
PTPRK-212ENST00000434424 OGFOD2Q6N063 350 aa9.27□□□□□ -0.93
PTPRK-212ENST00000434424 NPLOC4Q8TAT6 608 aa9.27□□□□□ -0.93
PTPRK-212ENST00000434424 FRS2Q8WU20 508 aa9.27□□□□□ -0.93
PTPRK-212ENST00000434424 SLC39A13Q96H72 371 aa9.27□□□□□ -0.93
PTPRK-212ENST00000434424 TBC1D32Q96NH3 1257 aa9.27□□□□□ -0.93
PTPRK-212ENST00000434424 ALG1Q9BT22 464 aa9.27□□□□□ -0.93
PTPRK-212ENST00000434424 METTL22Q9BUU2 404 aaPredicted RBP9.27□□□□□ -0.93
PTPRK-212ENST00000434424 YIPF2Q9BWQ6 316 aa9.27□□□□□ -0.93
PTPRK-212ENST00000434424 LGR6Q9HBX8 967 aa9.27□□□□□ -0.93
PTPRK-212ENST00000434424 EMC7Q9NPA0 242 aa9.27□□□□□ -0.93
PTPRK-212ENST00000434424 THG1LQ9NWX6 298 aaKnown RBP9.27□□□□□ -0.93
PTPRK-212ENST00000434424 COQ6Q9Y2Z9 468 aa9.27□□□□□ -0.93
PTPRK-212ENST00000434424 NPFFR2Q9Y5X5 522 aa9.27□□□□□ -0.93
PTPRK-212ENST00000434424 BACE2Q9Y5Z0 518 aa9.27□□□□□ -0.93
PTPRK-212ENST00000434424 TEX14Q8IWB6 1497 aa9.27□□□□□ -0.93
PTPRK-212ENST00000434424 CARMIL2Q6F5E8 1435 aa9.26□□□□□ -0.93
PTPRK-212ENST00000434424 C2orf71A6NGG8 1288 aa9.26□□□□□ -0.93
PTPRK-212ENST00000434424 AURKAO14965 403 aa9.26□□□□□ -0.93
PTPRK-212ENST00000434424 SRGAP2CP0DJJ0 459 aa9.26□□□□□ -0.93
PTPRK-212ENST00000434424 NOP2P46087 812 aaKnown RBP9.26□□□□□ -0.93
PTPRK-212ENST00000434424 KPNA1P52294 538 aaPredicted RBP9.26□□□□□ -0.93
PTPRK-212ENST00000434424 VPS72Q15906 364 aa9.26□□□□□ -0.93
PTPRK-212ENST00000434424 HDGFL2Q7Z4V5 671 aaPredicted RBP9.26□□□□□ -0.93
PTPRK-212ENST00000434424 CBARPQ8N350 705 aaPredicted RBP9.26□□□□□ -0.93
PTPRK-212ENST00000434424 CHTF18Q8WVB6 975 aa9.26□□□□□ -0.93
PTPRK-212ENST00000434424 AHCYL2Q96HN2 611 aaKnown RBP9.26□□□□□ -0.93
PTPRK-212ENST00000434424 COX4I2Q96KJ9 171 aa9.26□□□□□ -0.93
PTPRK-212ENST00000434424 MCMBPQ9BTE3 642 aa9.26□□□□□ -0.93
PTPRK-212ENST00000434424 CELF4Q9BZC1 486 aaKnown RBP9.26□□□□□ -0.93
PTPRK-212ENST00000434424 SLC13A1Q9BZW2 595 aa9.26□□□□□ -0.93
PTPRK-212ENST00000434424 GPRC5CQ9NQ84 441 aa9.26□□□□□ -0.93
PTPRK-212ENST00000434424 CKMP06732 381 aa9.25□□□□□ -0.93
PTPRK-212ENST00000434424 LTBRP36941 435 aa9.25□□□□□ -0.93
PTPRK-212ENST00000434424 PAK1Q13153 545 aa9.25□□□□□ -0.93
PTPRK-212ENST00000434424 NMIQ13287 307 aaPredicted RBP9.25□□□□□ -0.93
PTPRK-212ENST00000434424 TESK1Q15569 626 aa9.25□□□□□ -0.93
PTPRK-212ENST00000434424 TMEM177Q53S58 311 aa9.25□□□□□ -0.93
PTPRK-212ENST00000434424 E4F1Q66K89 784 aaPredicted RBP9.25□□□□□ -0.93
PTPRK-212ENST00000434424 LBX2Q6XYB7 198 aa9.25□□□□□ -0.93
PTPRK-212ENST00000434424 CHST14Q8NCH0 376 aa9.25□□□□□ -0.93
PTPRK-212ENST00000434424 SVIPQ8NHG7 77 aa9.25□□□□□ -0.93
PTPRK-212ENST00000434424 SEMA6CQ9H3T2 930 aa9.25□□□□□ -0.93
PTPRK-212ENST00000434424 TCF7L1Q9HCS4 588 aa9.25□□□□□ -0.93
PTPRK-212ENST00000434424 SPTLC3Q9NUV7 552 aa9.25□□□□□ -0.93
PTPRK-212ENST00000434424 BSDC1Q9NW68 430 aaPredicted RBP9.25□□□□□ -0.93
PTPRK-212ENST00000434424 OBP2AQ9NY56 170 aa9.25□□□□□ -0.93
PTPRK-212ENST00000434424 MINPP1Q9UNW1 487 aa9.25□□□□□ -0.93
PTPRK-212ENST00000434424 ANKRD6Q9Y2G4 727 aa9.25□□□□□ -0.93
PTPRK-212ENST00000434424 LMTK3Q96Q04 1460 aa9.24□□□□□ -0.93
PTPRK-212ENST00000434424 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP9.24□□□□□ -0.93
PTPRK-212ENST00000434424 VSTM5A8MXK1 200 aa9.24□□□□□ -0.93
PTPRK-212ENST00000434424 MT-CO1P00395 513 aa9.24□□□□□ -0.93
PTPRK-212ENST00000434424 NFICP08651 508 aa9.24□□□□□ -0.93
PTPRK-212ENST00000434424 ITGB5P18084 799 aa9.24□□□□□ -0.93
PTPRK-212ENST00000434424 IARSP41252 1262 aaKnown RBP9.24□□□□□ -0.93
PTPRK-212ENST00000434424 ERVK-21P61565 698 aa9.24□□□□□ -0.93
PTPRK-212ENST00000434424 INAVAQ3KP66 663 aa9.24□□□□□ -0.93
PTPRK-212ENST00000434424 LONRF3Q496Y0 759 aa9.24□□□□□ -0.93
PTPRK-212ENST00000434424 MINDY4Q4G0A6 757 aa9.24□□□□□ -0.93
PTPRK-212ENST00000434424 FAM47CQ5HY64 1035 aa9.24□□□□□ -0.93
PTPRK-212ENST00000434424 TPH2Q8IWU9 490 aa9.24□□□□□ -0.93
PTPRK-212ENST00000434424 TP53INP2Q8IXH6 220 aa9.24□□□□□ -0.93
PTPRK-212ENST00000434424 PCDH19Q8TAB3 1148 aa9.24□□□□□ -0.93
PTPRK-212ENST00000434424 PAK6Q9NQU5 681 aaPredicted RBP9.24□□□□□ -0.93
PTPRK-212ENST00000434424 TMEFF2Q9UIK5 374 aaPredicted RBP9.24□□□□□ -0.93
PTPRK-212ENST00000434424 PNMA8BQ9ULN7 279 aaPredicted RBP9.24□□□□□ -0.93
PTPRK-212ENST00000434424 KIAA0586Q9BVV6 1533 aa9.24□□□□□ -0.93
PTPRK-212ENST00000434424 WASHC2AQ641Q2 1341 aa9.24□□□□□ -0.93
PTPRK-212ENST00000434424 ADCY10Q96PN6 1610 aa9.23□□□□□ -0.93
PTPRK-212ENST00000434424 EOMESO95936 686 aa9.23□□□□□ -0.93
PTPRK-212ENST00000434424 ATP2A2P16615 1042 aaKnown RBP9.23□□□□□ -0.93
PTPRK-212ENST00000434424 SEPHS1P49903 392 aa9.23□□□□□ -0.93
PTPRK-212ENST00000434424 SESN3P58005 492 aa9.23□□□□□ -0.93
PTPRK-212ENST00000434424 KCNAB2Q13303 367 aa9.23□□□□□ -0.93
PTPRK-212ENST00000434424 KLF1Q13351 362 aaPredicted RBP9.23□□□□□ -0.93
PTPRK-212ENST00000434424 CRTC3Q6UUV7 619 aa9.23□□□□□ -0.93
PTPRK-212ENST00000434424 TOP6BLQ8N6T0 577 aa9.23□□□□□ -0.93
PTPRK-212ENST00000434424 DTWD2Q8NBA8 298 aa9.23□□□□□ -0.93
PTPRK-212ENST00000434424 DIO2Q92813 273 aa9.23□□□□□ -0.93
PTPRK-212ENST00000434424 KRTAP4-7Q9BYR0 210 aa9.23□□□□□ -0.93
PTPRK-212ENST00000434424 VTA1Q9NP79 307 aa9.23□□□□□ -0.93
PTPRK-212ENST00000434424 PRDM11Q9NQV5 511 aa9.23□□□□□ -0.93
PTPRK-212ENST00000434424 ZC3H7BQ9UGR2 993 aaKnown RBP9.23□□□□□ -0.93
PTPRK-212ENST00000434424 TNIKQ9UKE5 1360 aa9.23□□□□□ -0.93
PTPRK-212ENST00000434424 ARID1BQ8NFD5 2236 aaPredicted RBP9.23□□□□□ -0.93
PTPRK-212ENST00000434424 ABCC2Q92887 1545 aa9.22□□□□□ -0.93
PTPRK-212ENST00000434424 PTPDC1A2A3K4 754 aa9.22□□□□□ -0.93
PTPRK-212ENST00000434424 GSTA4O15217 222 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms