RNA–Protein interactions for RNA: ENST00000432012.1

NIPAL3-205, Transcript of NIPA like domain containing 3, humanhuman

TSL 1 (best)

Gene NIPAL3, Length 2,714 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-205ENST00000432012 SUV39H2Q9H5I1 410 aa7.09□□□□□ -1.27
NIPAL3-205ENST00000432012 EYA4O95677 639 aa7.09□□□□□ -1.27
NIPAL3-205ENST00000432012 NR3C2P08235 984 aa7.09□□□□□ -1.27
NIPAL3-205ENST00000432012 NBPF7P0C2Y1 421 aaPredicted RBP7.09□□□□□ -1.27
NIPAL3-205ENST00000432012 PDE1AP54750 535 aa7.09□□□□□ -1.27
NIPAL3-205ENST00000432012 STK3Q13188 491 aa7.09□□□□□ -1.27
NIPAL3-205ENST00000432012 PWP1Q13610 501 aa7.09□□□□□ -1.27
NIPAL3-205ENST00000432012 COL9A2Q14055 689 aaPredicted RBP7.09□□□□□ -1.27
NIPAL3-205ENST00000432012 GALEQ14376 348 aa7.09□□□□□ -1.27
NIPAL3-205ENST00000432012 TEAD4Q15561 434 aa7.09□□□□□ -1.27
NIPAL3-205ENST00000432012 SNX32Q86XE0 403 aa7.09□□□□□ -1.27
NIPAL3-205ENST00000432012 LRGUKQ96M69 825 aa7.09□□□□□ -1.27
NIPAL3-205ENST00000432012 SCLT1Q96NL6 688 aa7.09□□□□□ -1.27
NIPAL3-205ENST00000432012 PRDM4Q9UKN5 801 aa7.09□□□□□ -1.27
NIPAL3-205ENST00000432012 PPEF1O14829 653 aaPredicted RBP7.08□□□□□ -1.28
NIPAL3-205ENST00000432012 S1PR4O95977 384 aa7.08□□□□□ -1.28
NIPAL3-205ENST00000432012 KRT24Q2M2I5 525 aa7.08□□□□□ -1.28
NIPAL3-205ENST00000432012 TBC1D9BQ66K14 1250 aa7.08□□□□□ -1.28
NIPAL3-205ENST00000432012 MAGEB6Q8N7X4 407 aa7.08□□□□□ -1.28
NIPAL3-205ENST00000432012 LEO1Q8WVC0 666 aaPredicted RBP7.08□□□□□ -1.28
NIPAL3-205ENST00000432012 EHD4Q9H223 541 aa7.08□□□□□ -1.28
NIPAL3-205ENST00000432012 OSGEPQ9NPF4 335 aa7.08□□□□□ -1.28
NIPAL3-205ENST00000432012 MCM8Q9UJA3 840 aa7.08□□□□□ -1.28
NIPAL3-205ENST00000432012 PTPN22Q9Y2R2 807 aa7.08□□□□□ -1.28
NIPAL3-205ENST00000432012 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP7.08□□□□□ -1.28
NIPAL3-205ENST00000432012 UPK3BL1B0FP48 263 aa7.08□□□□□ -1.28
NIPAL3-205ENST00000432012 ALG1L2C9J202 215 aa7.08□□□□□ -1.28
NIPAL3-205ENST00000432012 UPK3BL2E5RIL1 263 aa7.08□□□□□ -1.28
NIPAL3-205ENST00000432012 CHL1O00533 1208 aa7.08□□□□□ -1.28
NIPAL3-205ENST00000432012 TBC1D8O95759 1140 aa7.08□□□□□ -1.28
NIPAL3-205ENST00000432012 STARD3NLO95772 234 aa7.08□□□□□ -1.28
NIPAL3-205ENST00000432012 ADH1BP00325 375 aa7.08□□□□□ -1.28
NIPAL3-205ENST00000432012 ZYXQ15942 572 aaKnown RBP7.08□□□□□ -1.28
NIPAL3-205ENST00000432012 FXNQ16595 210 aa7.08□□□□□ -1.28
NIPAL3-205ENST00000432012 GPATCH4Q5T3I0 446 aaKnown RBP7.08□□□□□ -1.28
NIPAL3-205ENST00000432012 ZCCHC8Q6NZY4 707 aaKnown RBP7.08□□□□□ -1.28
NIPAL3-205ENST00000432012 DNAJC10Q8IXB1 793 aa7.08□□□□□ -1.28
NIPAL3-205ENST00000432012 GALNT12Q8IXK2 581 aa7.08□□□□□ -1.28
NIPAL3-205ENST00000432012 FAM184AQ8NB25 1140 aa7.08□□□□□ -1.28
NIPAL3-205ENST00000432012 SNED1Q8TER0 1413 aa7.08□□□□□ -1.28
NIPAL3-205ENST00000432012 RELTQ969Z4 430 aa7.08□□□□□ -1.28
NIPAL3-205ENST00000432012 DCPSQ96C86 337 aaKnown RBP7.08□□□□□ -1.28
NIPAL3-205ENST00000432012 ESYT1Q9BSJ8 1104 aa7.08□□□□□ -1.28
NIPAL3-205ENST00000432012 LGR4Q9BXB1 951 aa7.08□□□□□ -1.28
NIPAL3-205ENST00000432012 CXorf56Q9H5V9 222 aa7.08□□□□□ -1.28
NIPAL3-205ENST00000432012 TRIM17Q9Y577 477 aa7.08□□□□□ -1.28
NIPAL3-205ENST00000432012 A0A1W2PP55 124 aa7.07□□□□□ -1.28
NIPAL3-205ENST00000432012 GOLIM4O00461 696 aa7.07□□□□□ -1.28
NIPAL3-205ENST00000432012 CHAF1AQ13111 956 aaPredicted RBP7.07□□□□□ -1.28
NIPAL3-205ENST00000432012 ALFQ53S48 1182 aa7.07□□□□□ -1.28
NIPAL3-205ENST00000432012 DNAJC21Q5F1R6 531 aaKnown RBP7.07□□□□□ -1.28
NIPAL3-205ENST00000432012 TTBK2Q6IQ55 1244 aa7.07□□□□□ -1.28
NIPAL3-205ENST00000432012 SMAP1Q8IYB5 467 aaPredicted RBP7.07□□□□□ -1.28
NIPAL3-205ENST00000432012 EXOC2Q96KP1 924 aa7.07□□□□□ -1.28
NIPAL3-205ENST00000432012 SELENOOQ9BVL4 669 aa7.07□□□□□ -1.28
NIPAL3-205ENST00000432012 TEX13AQ9BXU3 409 aaPredicted RBP7.07□□□□□ -1.28
NIPAL3-205ENST00000432012 USP25Q9UHP3 1055 aa7.07□□□□□ -1.28
NIPAL3-205ENST00000432012 ZBTB21Q9ULJ3 1066 aa7.07□□□□□ -1.28
NIPAL3-205ENST00000432012 ZNRF3Q9ULT6 936 aa7.07□□□□□ -1.28
NIPAL3-205ENST00000432012 PRRT4C9JH25 899 aa7.07□□□□□ -1.28
NIPAL3-205ENST00000432012 EIF5P55010 431 aaKnown RBP7.07□□□□□ -1.28
NIPAL3-205ENST00000432012 COBLL1Q53SF7 1204 aa7.07□□□□□ -1.28
NIPAL3-205ENST00000432012 C1orf141Q5JVX7 400 aa7.07□□□□□ -1.28
NIPAL3-205ENST00000432012 C1orf228Q6PIY5 440 aa7.07□□□□□ -1.28
NIPAL3-205ENST00000432012 OTOP1Q7RTM1 612 aa7.07□□□□□ -1.28
NIPAL3-205ENST00000432012 CYP2U1Q7Z449 544 aa7.07□□□□□ -1.28
NIPAL3-205ENST00000432012 OBP2AQ9NY56 170 aa7.07□□□□□ -1.28
NIPAL3-205ENST00000432012 SALL4Q9UJQ4 1053 aa7.07□□□□□ -1.28
NIPAL3-205ENST00000432012 PALD1Q9ULE6 856 aa7.07□□□□□ -1.28
NIPAL3-205ENST00000432012 SYNGAP1Q96PV0 1343 aa7.07□□□□□ -1.28
NIPAL3-205ENST00000432012 SALL3Q9BXA9 1300 aa7.07□□□□□ -1.28
NIPAL3-205ENST00000432012 GMPSP49915 693 aaPredicted RBP7.07□□□□□ -1.28
NIPAL3-205ENST00000432012 INHBEP58166 350 aa7.07□□□□□ -1.28
NIPAL3-205ENST00000432012 UVSSAQ2YD98 709 aa7.07□□□□□ -1.28
NIPAL3-205ENST00000432012 ATP13A4Q4VNC1 1196 aa7.07□□□□□ -1.28
NIPAL3-205ENST00000432012 TJAP1Q5JTD0 557 aa7.07□□□□□ -1.28
NIPAL3-205ENST00000432012 LRRTM3Q86VH5 581 aa7.07□□□□□ -1.28
NIPAL3-205ENST00000432012 PPHLN1Q8NEY8 458 aaKnown RBP7.07□□□□□ -1.28
NIPAL3-205ENST00000432012 PIBF1Q8WXW3 757 aa7.07□□□□□ -1.28
NIPAL3-205ENST00000432012 XAGE2Q96GT9 111 aa7.07□□□□□ -1.28
NIPAL3-205ENST00000432012 HHIPQ96QV1 700 aa7.07□□□□□ -1.28
NIPAL3-205ENST00000432012 MAGED1Q9Y5V3 778 aaPredicted RBP7.07□□□□□ -1.28
NIPAL3-205ENST00000432012 GABRDO14764 452 aa7.06□□□□□ -1.28
NIPAL3-205ENST00000432012 NAT2P11245 290 aa7.06□□□□□ -1.28
NIPAL3-205ENST00000432012 CENPCQ03188 943 aa7.06□□□□□ -1.28
NIPAL3-205ENST00000432012 LMNB2Q03252 620 aa7.06□□□□□ -1.28
NIPAL3-205ENST00000432012 GRM3Q14832 879 aa7.06□□□□□ -1.28
NIPAL3-205ENST00000432012 SEPT2Q15019 361 aa7.06□□□□□ -1.28
NIPAL3-205ENST00000432012 DNTTIP2Q5QJE6 756 aaKnown RBP7.06□□□□□ -1.28
NIPAL3-205ENST00000432012 C6orf118Q5T5N4 469 aa7.06□□□□□ -1.28
NIPAL3-205ENST00000432012 FAM102BQ5T8I3 360 aa7.06□□□□□ -1.28
NIPAL3-205ENST00000432012 DEFB123Q8N688 67 aa7.06□□□□□ -1.28
NIPAL3-205ENST00000432012 DPF3Q92784 378 aa7.06□□□□□ -1.28
NIPAL3-205ENST00000432012 DPF2Q92785 391 aa7.06□□□□□ -1.28
NIPAL3-205ENST00000432012 RIC8AQ9NPQ8 531 aa7.06□□□□□ -1.28
NIPAL3-205ENST00000432012 CDV3Q9UKY7 258 aaKnown RBP7.06□□□□□ -1.28
NIPAL3-205ENST00000432012 ZNF652Q9Y2D9 606 aa7.06□□□□□ -1.28
NIPAL3-205ENST00000432012 ZBTB1Q9Y2K1 713 aa7.06□□□□□ -1.28
NIPAL3-205ENST00000432012 ZNF609O15014 1411 aa7.06□□□□□ -1.28
NIPAL3-205ENST00000432012 KDM3BQ7LBC6 1761 aa7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms