RNA–Protein interactions for RNA: ENST00000417997.1

HMGB3P20-201, Transcript of high mobility group box 3 pseudogene 20, humanhuman

BASIC

Gene HMGB3P20, Length 600 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P20-201ENST00000417997 PLA2G2DQ9UNK4 145 aa5.38□□□□□ -1.55
HMGB3P20-201ENST00000417997 R3HCC1Q9Y3T6 440 aaKnown RBP5.38□□□□□ -1.55
HMGB3P20-201ENST00000417997 CD109Q6YHK3 1445 aa5.38□□□□□ -1.55
HMGB3P20-201ENST00000417997 ZNF518AQ6AHZ1 1483 aa5.38□□□□□ -1.55
HMGB3P20-201ENST00000417997 KIDINS220Q9ULH0 1771 aa5.37□□□□□ -1.55
HMGB3P20-201ENST00000417997 ADAMTS20P59510 1910 aa5.37□□□□□ -1.55
HMGB3P20-201ENST00000417997 C7orf72A4D263 438 aa5.37□□□□□ -1.55
HMGB3P20-201ENST00000417997 PPP1R11O60927 126 aaPredicted RBP5.37□□□□□ -1.55
HMGB3P20-201ENST00000417997 SASH1O94885 1247 aa5.37□□□□□ -1.55
HMGB3P20-201ENST00000417997 THBDP07204 575 aa5.37□□□□□ -1.55
HMGB3P20-201ENST00000417997 DNAJA1P31689 397 aaKnown RBP5.37□□□□□ -1.55
HMGB3P20-201ENST00000417997 ECI1P42126 302 aa5.37□□□□□ -1.55
HMGB3P20-201ENST00000417997 FXNQ16595 210 aa5.37□□□□□ -1.55
HMGB3P20-201ENST00000417997 WWC2Q6AWC2 1192 aa5.37□□□□□ -1.55
HMGB3P20-201ENST00000417997 NLGN1Q8N2Q7 840 aa5.37□□□□□ -1.55
HMGB3P20-201ENST00000417997 MARCH10Q8NA82 808 aaPredicted RBP5.37□□□□□ -1.55
HMGB3P20-201ENST00000417997 BTN2A2Q8WVV5 523 aa5.37□□□□□ -1.55
HMGB3P20-201ENST00000417997 PEX11GQ96HA9 241 aa5.37□□□□□ -1.55
HMGB3P20-201ENST00000417997 MARCH2Q9P0N8 246 aa5.37□□□□□ -1.55
HMGB3P20-201ENST00000417997 TONSLQ96HA7 1378 aa5.37□□□□□ -1.55
HMGB3P20-201ENST00000417997 ERBINQ96RT1 1412 aa5.37□□□□□ -1.55
HMGB3P20-201ENST00000417997 NEO1Q92859 1461 aa5.37□□□□□ -1.55
HMGB3P20-201ENST00000417997 KDM5CP41229 1560 aa5.37□□□□□ -1.55
HMGB3P20-201ENST00000417997 DEPDC5O75140 1603 aa5.37□□□□□ -1.55
HMGB3P20-201ENST00000417997 PPRC1Q5VV67 1664 aaKnown RBP5.37□□□□□ -1.55
HMGB3P20-201ENST00000417997 TBX1O43435 398 aa5.36□□□□□ -1.55
HMGB3P20-201ENST00000417997 NTRK1P04629 796 aa5.36□□□□□ -1.55
HMGB3P20-201ENST00000417997 ITGAVP06756 1048 aa5.36□□□□□ -1.55
HMGB3P20-201ENST00000417997 ASGR2P07307 311 aa5.36□□□□□ -1.55
HMGB3P20-201ENST00000417997 SNRPB2P08579 225 aaKnown RBP5.36□□□□□ -1.55
HMGB3P20-201ENST00000417997 ATF2P15336 505 aa5.36□□□□□ -1.55
HMGB3P20-201ENST00000417997 MC3RP41968 323 aa5.36□□□□□ -1.55
HMGB3P20-201ENST00000417997 KCNJ6P48051 423 aa5.36□□□□□ -1.55
HMGB3P20-201ENST00000417997 FOXO4P98177 505 aa5.36□□□□□ -1.55
HMGB3P20-201ENST00000417997 MBLAC2Q68D91 279 aa5.36□□□□□ -1.55
HMGB3P20-201ENST00000417997 ZDHHC14Q8IZN3 488 aa5.36□□□□□ -1.55
HMGB3P20-201ENST00000417997 MTA3Q9BTC8 594 aa5.36□□□□□ -1.55
HMGB3P20-201ENST00000417997 NKX2-4Q9H2Z4 354 aa5.36□□□□□ -1.55
HMGB3P20-201ENST00000417997 SIT1Q9Y3P8 196 aa5.36□□□□□ -1.55
HMGB3P20-201ENST00000417997 PMF1-BGLAPU3KQ54 211 aa5.36□□□□□ -1.55
HMGB3P20-201ENST00000417997 IRS2Q9Y4H2 1338 aa5.36□□□□□ -1.55
HMGB3P20-201ENST00000417997 POGZQ7Z3K3 1410 aa5.36□□□□□ -1.55
HMGB3P20-201ENST00000417997 SCAPERQ9BY12 1400 aa5.36□□□□□ -1.55
HMGB3P20-201ENST00000417997 TRAPPC8Q9Y2L5 1435 aa5.36□□□□□ -1.55
HMGB3P20-201ENST00000417997 PZPP20742 1482 aa5.36□□□□□ -1.55
HMGB3P20-201ENST00000417997 TEX14Q8IWB6 1497 aa5.36□□□□□ -1.55
HMGB3P20-201ENST00000417997 ABCA6Q8N139 1617 aa5.36□□□□□ -1.55
HMGB3P20-201ENST00000417997 CEP152O94986 1710 aa5.36□□□□□ -1.55
HMGB3P20-201ENST00000417997 SPHKAPQ2M3C7 1700 aa5.35□□□□□ -1.55
HMGB3P20-201ENST00000417997 TET3O43151 1660 aa5.35□□□□□ -1.55
HMGB3P20-201ENST00000417997 FAM135AQ9P2D6 1515 aa5.35□□□□□ -1.55
HMGB3P20-201ENST00000417997 RTEL1-TNFRSF6BF6WH68 1400 aa5.35□□□□□ -1.55
HMGB3P20-201ENST00000417997 SPAG9O60271 1321 aaKnown RBP5.35□□□□□ -1.55
HMGB3P20-201ENST00000417997 SUSD5O60279 629 aa5.35□□□□□ -1.55
HMGB3P20-201ENST00000417997 NCAM1P13591 858 aa5.35□□□□□ -1.55
HMGB3P20-201ENST00000417997 IGFBP6P24592 240 aaPredicted RBP5.35□□□□□ -1.55
HMGB3P20-201ENST00000417997 PMLP29590 882 aa5.35□□□□□ -1.55
HMGB3P20-201ENST00000417997 ZNF227Q86WZ6 799 aa5.35□□□□□ -1.55
HMGB3P20-201ENST00000417997 TEX2Q8IWB9 1127 aa5.35□□□□□ -1.55
HMGB3P20-201ENST00000417997 SYT8Q8NBV8 401 aa5.35□□□□□ -1.55
HMGB3P20-201ENST00000417997 NETO2Q8NC67 525 aa5.35□□□□□ -1.55
HMGB3P20-201ENST00000417997 FEZF2Q8TBJ5 459 aa5.35□□□□□ -1.55
HMGB3P20-201ENST00000417997 MICAL1Q8TDZ2 1067 aa5.35□□□□□ -1.55
HMGB3P20-201ENST00000417997 COPS5Q92905 334 aa5.35□□□□□ -1.55
HMGB3P20-201ENST00000417997 MRGPRX3Q96LB0 322 aa5.35□□□□□ -1.55
HMGB3P20-201ENST00000417997 KCNC2Q96PR1 638 aa5.35□□□□□ -1.55
HMGB3P20-201ENST00000417997 ZNF408Q9H9D4 720 aa5.35□□□□□ -1.55
HMGB3P20-201ENST00000417997 CYP26B1Q9NR63 512 aa5.35□□□□□ -1.55
HMGB3P20-201ENST00000417997 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP5.35□□□□□ -1.55
HMGB3P20-201ENST00000417997 RNF17Q9BXT8 1623 aaKnown RBP5.34□□□□□ -1.55
HMGB3P20-201ENST00000417997 DENND4BO75064 1496 aaPredicted RBP5.34□□□□□ -1.55
HMGB3P20-201ENST00000417997 MAGI2Q86UL8 1455 aa5.34□□□□□ -1.55
HMGB3P20-201ENST00000417997 C22orf46C9J442 243 aa5.34□□□□□ -1.55
HMGB3P20-201ENST00000417997 FGRP09769 529 aa5.34□□□□□ -1.55
HMGB3P20-201ENST00000417997 FBLN1P23142 703 aa5.34□□□□□ -1.55
HMGB3P20-201ENST00000417997 SLC9A5Q14940 896 aa5.34□□□□□ -1.55
HMGB3P20-201ENST00000417997 INF2Q27J81 1249 aa5.34□□□□□ -1.55
HMGB3P20-201ENST00000417997 SP8Q8IXZ3 490 aa5.34□□□□□ -1.55
HMGB3P20-201ENST00000417997 ADGRG2Q8IZP9 1017 aa5.34□□□□□ -1.55
HMGB3P20-201ENST00000417997 LINC01356Q8N9X3 169 aa5.34□□□□□ -1.55
HMGB3P20-201ENST00000417997 FRS2Q8WU20 508 aa5.34□□□□□ -1.55
HMGB3P20-201ENST00000417997 DPF3Q92784 378 aa5.34□□□□□ -1.55
HMGB3P20-201ENST00000417997 TSPAN17Q96FV3 270 aa5.34□□□□□ -1.55
HMGB3P20-201ENST00000417997 MMP19Q99542 508 aa5.34□□□□□ -1.55
HMGB3P20-201ENST00000417997 TINF2Q9BSI4 451 aa5.34□□□□□ -1.55
HMGB3P20-201ENST00000417997 RNF38Q9H0F5 515 aa5.34□□□□□ -1.55
HMGB3P20-201ENST00000417997 AP5M1Q9H0R1 490 aa5.34□□□□□ -1.55
HMGB3P20-201ENST00000417997 ST7Q9NRC1 585 aa5.34□□□□□ -1.55
HMGB3P20-201ENST00000417997 RAPGEFL1Q9UHV5 662 aa5.34□□□□□ -1.55
HMGB3P20-201ENST00000417997 BCORL1Q5H9F3 1711 aa5.34□□□□□ -1.56
HMGB3P20-201ENST00000417997 ZC3H13Q5T200 1668 aaKnown RBP5.34□□□□□ -1.56
HMGB3P20-201ENST00000417997 FRMPD1Q5SYB0 1578 aa5.33□□□□□ -1.56
HMGB3P20-201ENST00000417997 DIP2CQ9Y2E4 1556 aa5.33□□□□□ -1.56
HMGB3P20-201ENST00000417997 PRDM15P57071 1507 aaPredicted RBP5.33□□□□□ -1.56
HMGB3P20-201ENST00000417997 ZMYM4Q5VZL5 1548 aa5.33□□□□□ -1.56
HMGB3P20-201ENST00000417997 NUP155O75694 1391 aa5.33□□□□□ -1.56
HMGB3P20-201ENST00000417997 OTOL1A6NHN0 477 aaPredicted RBP5.33□□□□□ -1.56
HMGB3P20-201ENST00000417997 MEFVO15553 781 aaPredicted RBP5.33□□□□□ -1.56
HMGB3P20-201ENST00000417997 MYO1BO43795 1136 aa5.33□□□□□ -1.56
HMGB3P20-201ENST00000417997 GJB6O95452 261 aa5.33□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms