RNA–Protein interactions for RNA: ENST00000413582.6

RFFL-203, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 5 BASIC

Gene RFFL, Length 1,217 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-203ENST00000413582 TOMM22Q9NS69 142 aa11.21□□□□□ -0.61
RFFL-203ENST00000413582 EMSYQ7Z589 1322 aa11.2□□□□□ -0.62
RFFL-203ENST00000413582 C19orf67A6NJJ6 358 aa11.2□□□□□ -0.62
RFFL-203ENST00000413582 AMHP03971 560 aa11.2□□□□□ -0.62
RFFL-203ENST00000413582 NEFLP07196 543 aa11.2□□□□□ -0.62
RFFL-203ENST00000413582 HOXD8P13378 290 aaPredicted RBP11.2□□□□□ -0.62
RFFL-203ENST00000413582 TCEAL5Q5H9L2 206 aa11.2□□□□□ -0.62
RFFL-203ENST00000413582 DBF4BQ8NFT6 615 aa11.2□□□□□ -0.62
RFFL-203ENST00000413582 NSUN6Q8TEA1 469 aaKnown RBP11.2□□□□□ -0.62
RFFL-203ENST00000413582 TBC1D5Q92609 795 aa11.2□□□□□ -0.62
RFFL-203ENST00000413582 PABPC5Q96DU9 382 aaKnown RBP11.2□□□□□ -0.62
RFFL-203ENST00000413582 SAMD11Q96NU1 681 aa11.2□□□□□ -0.62
RFFL-203ENST00000413582 TAAR1Q96RJ0 339 aa11.2□□□□□ -0.62
RFFL-203ENST00000413582 MAF1Q9H063 256 aa11.2□□□□□ -0.62
RFFL-203ENST00000413582 CPVLQ9H3G5 476 aa11.2□□□□□ -0.62
RFFL-203ENST00000413582 PRKAG3Q9UGI9 489 aa11.2□□□□□ -0.62
RFFL-203ENST00000413582 CTNNA3Q9UI47 895 aa11.2□□□□□ -0.62
RFFL-203ENST00000413582 DDX41Q9UJV9 622 aaKnown RBP11.2□□□□□ -0.62
RFFL-203ENST00000413582 LAMA4Q16363 1823 aa11.2□□□□□ -0.62
RFFL-203ENST00000413582 ABCB11O95342 1321 aa11.19□□□□□ -0.62
RFFL-203ENST00000413582 ZMYM6O95789 1325 aa11.19□□□□□ -0.62
RFFL-203ENST00000413582 SALL3Q9BXA9 1300 aa11.19□□□□□ -0.62
RFFL-203ENST00000413582 H3BNC9 293 aa11.19□□□□□ -0.62
RFFL-203ENST00000413582 GOLGA8HP0CJ92 632 aa11.19□□□□□ -0.62
RFFL-203ENST00000413582 STXBP2Q15833 593 aa11.19□□□□□ -0.62
RFFL-203ENST00000413582 CDC37Q16543 378 aaPredicted RBP11.19□□□□□ -0.62
RFFL-203ENST00000413582 GPATCH4Q5T3I0 446 aaKnown RBP11.19□□□□□ -0.62
RFFL-203ENST00000413582 HFE2Q6ZVN8 426 aa11.19□□□□□ -0.62
RFFL-203ENST00000413582 SERINC5Q86VE9 423 aa11.19□□□□□ -0.62
RFFL-203ENST00000413582 ADHFE1Q8IWW8 467 aa11.19□□□□□ -0.62
RFFL-203ENST00000413582 BANK1Q8NDB2 785 aa11.19□□□□□ -0.62
RFFL-203ENST00000413582 ANKS1AQ92625 1134 aa11.19□□□□□ -0.62
RFFL-203ENST00000413582 IWS1Q96ST2 819 aa11.19□□□□□ -0.62
RFFL-203ENST00000413582 RMDN3Q96TC7 470 aa11.19□□□□□ -0.62
RFFL-203ENST00000413582 FGAP02671 866 aa11.18□□□□□ -0.62
RFFL-203ENST00000413582 EIF2AK2P19525 551 aaKnown RBP11.18□□□□□ -0.62
RFFL-203ENST00000413582 MX1P20591 662 aa11.18□□□□□ -0.62
RFFL-203ENST00000413582 HOXC8P31273 242 aa11.18□□□□□ -0.62
RFFL-203ENST00000413582 GPM6BQ13491 265 aa11.18□□□□□ -0.62
RFFL-203ENST00000413582 LAMC2Q13753 1193 aa11.18□□□□□ -0.62
RFFL-203ENST00000413582 PLEKHG4Q58EX7 1191 aa11.18□□□□□ -0.62
RFFL-203ENST00000413582 FBXO11Q86XK2 927 aa11.18□□□□□ -0.62
RFFL-203ENST00000413582 TBC1D10CQ8IV04 446 aa11.18□□□□□ -0.62
RFFL-203ENST00000413582 TTC14Q96N46 770 aa11.18□□□□□ -0.62
RFFL-203ENST00000413582 YME1L1Q96TA2 773 aa11.18□□□□□ -0.62
RFFL-203ENST00000413582 UBA5Q9GZZ9 404 aa11.18□□□□□ -0.62
RFFL-203ENST00000413582 NSUN3Q9H649 340 aaKnown RBP11.18□□□□□ -0.62
RFFL-203ENST00000413582 FAM50BQ9Y247 325 aa11.18□□□□□ -0.62
RFFL-203ENST00000413582 MRVI1Q9Y6F6 885 aa11.18□□□□□ -0.62
RFFL-203ENST00000413582 A0A0D9SFI3 127 aa11.17□□□□□ -0.62
RFFL-203ENST00000413582 RSPH10B2B2RC85 870 aa11.17□□□□□ -0.62
RFFL-203ENST00000413582 RSPH10BP0C881 870 aa11.17□□□□□ -0.62
RFFL-203ENST00000413582 IRS1P35568 1242 aa11.17□□□□□ -0.62
RFFL-203ENST00000413582 LTBRP36941 435 aa11.17□□□□□ -0.62
RFFL-203ENST00000413582 THPOP40225 353 aa11.17□□□□□ -0.62
RFFL-203ENST00000413582 HAND2P61296 217 aa11.17□□□□□ -0.62
RFFL-203ENST00000413582 ARHGEF16Q5VV41 709 aa11.17□□□□□ -0.62
RFFL-203ENST00000413582 EP400NLQ6ZTU2 488 aa11.17□□□□□ -0.62
RFFL-203ENST00000413582 RPAINQ86UA6 219 aa11.17□□□□□ -0.62
RFFL-203ENST00000413582 DHX37Q8IY37 1157 aaKnown RBP11.17□□□□□ -0.62
RFFL-203ENST00000413582 TMEM192Q8IY95 271 aa11.17□□□□□ -0.62
RFFL-203ENST00000413582 TOP1MTQ969P6 601 aa11.17□□□□□ -0.62
RFFL-203ENST00000413582 SNX27Q96L92 541 aa11.17□□□□□ -0.62
RFFL-203ENST00000413582 OSBPL7Q9BZF2 842 aa11.17□□□□□ -0.62
RFFL-203ENST00000413582 PXMP2Q9NR77 195 aa11.17□□□□□ -0.62
RFFL-203ENST00000413582 CLDND1Q9NY35 253 aa11.17□□□□□ -0.62
RFFL-203ENST00000413582 NEDD4P46934 1319 aa11.16□□□□□ -0.62
RFFL-203ENST00000413582 LOC101059915A0A1B0GWI6 518 aaPredicted RBP11.16□□□□□ -0.62
RFFL-203ENST00000413582 EIF3JO75822 258 aaKnown RBP11.16□□□□□ -0.62
RFFL-203ENST00000413582 RGS20O76081 388 aa11.16□□□□□ -0.62
RFFL-203ENST00000413582 NR3C2P08235 984 aa11.16□□□□□ -0.62
RFFL-203ENST00000413582 LINC00271P0C7V0 271 aa11.16□□□□□ -0.62
RFFL-203ENST00000413582 PCP11498 1178 aaKnown RBP11.16□□□□□ -0.62
RFFL-203ENST00000413582 QRICH1Q2TAL8 776 aa11.16□□□□□ -0.62
RFFL-203ENST00000413582 HSDL1Q3SXM5 330 aa11.16□□□□□ -0.62
RFFL-203ENST00000413582 MYSM1Q5VVJ2 828 aa11.16□□□□□ -0.62
RFFL-203ENST00000413582 ZNF589Q86UQ0 364 aaPredicted RBP11.16□□□□□ -0.62
RFFL-203ENST00000413582 MCF2L2Q86YR7 1114 aa11.16□□□□□ -0.62
RFFL-203ENST00000413582 ADGRF4Q8IZF3 695 aa11.16□□□□□ -0.62
RFFL-203ENST00000413582 SEPT8Q92599 483 aa11.16□□□□□ -0.62
RFFL-203ENST00000413582 FAM227BQ96M60 508 aa11.16□□□□□ -0.62
RFFL-203ENST00000413582 SPATA33Q96N06 139 aa11.16□□□□□ -0.62
RFFL-203ENST00000413582 C16orf70Q9BSU1 422 aa11.16□□□□□ -0.62
RFFL-203ENST00000413582 HELLSQ9NRZ9 838 aa11.16□□□□□ -0.62
RFFL-203ENST00000413582 MUTYHQ9UIF7 546 aa11.16□□□□□ -0.62
RFFL-203ENST00000413582 KMT2EQ8IZD2 1858 aa11.15□□□□□ -0.62
RFFL-203ENST00000413582 DOCK5Q9H7D0 1870 aa11.15□□□□□ -0.62
RFFL-203ENST00000413582 C17orf102A2RUQ5 167 aa11.15□□□□□ -0.62
RFFL-203ENST00000413582 OPLAHO14841 1288 aa11.15□□□□□ -0.62
RFFL-203ENST00000413582 SORBS3O60504 671 aa11.15□□□□□ -0.62
RFFL-203ENST00000413582 PPFIA4O75335 1185 aa11.15□□□□□ -0.62
RFFL-203ENST00000413582 UPP2O95045 317 aa11.15□□□□□ -0.62
RFFL-203ENST00000413582 HSPD1P10809 573 aaKnown RBP11.15□□□□□ -0.62
RFFL-203ENST00000413582 UBA1P22314 1058 aaKnown RBP11.15□□□□□ -0.62
RFFL-203ENST00000413582 PLCB2Q00722 1185 aa11.15□□□□□ -0.62
RFFL-203ENST00000413582 GHRHRQ02643 423 aa11.15□□□□□ -0.62
RFFL-203ENST00000413582 DLX2Q07687 328 aaPredicted RBP11.15□□□□□ -0.62
RFFL-203ENST00000413582 SMAD2Q15796 467 aaKnown RBP11.15□□□□□ -0.62
RFFL-203ENST00000413582 CTC1Q2NKJ3 1217 aa11.15□□□□□ -0.62
RFFL-203ENST00000413582 HERC4Q5GLZ8 1057 aaPredicted RBP11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms