RNA–Protein interactions for RNA: ENST00000410055.5

PDK1-203, Transcript of pyruvate dehydrogenase kinase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDK1, Length 2,990 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDK1-203ENST00000410055 GLIS3Q8NEA6 775 aa18.45■□□□□ 0.54
PDK1-203ENST00000410055 ZNF507Q8TCN5 953 aa18.45■□□□□ 0.54
PDK1-203ENST00000410055 SNX29Q8TEQ0 813 aa18.45■□□□□ 0.54
PDK1-203ENST00000410055 LAMB1P07942 1786 aa18.44■□□□□ 0.54
PDK1-203ENST00000410055 TNRC6CQ9HCJ0 1690 aaKnown RBP18.44■□□□□ 0.54
PDK1-203ENST00000410055 ATP1A1P05023 1023 aaKnown RBP18.44■□□□□ 0.54
PDK1-203ENST00000410055 PLCG2P16885 1265 aa18.44■□□□□ 0.54
PDK1-203ENST00000410055 PSMD2Q13200 908 aa18.44■□□□□ 0.54
PDK1-203ENST00000410055 FAM71BQ8TC56 605 aa18.44■□□□□ 0.54
PDK1-203ENST00000410055 DHTKD1Q96HY7 919 aaPredicted RBP18.44■□□□□ 0.54
PDK1-203ENST00000410055 LACRTQ9GZZ8 138 aa18.44■□□□□ 0.54
PDK1-203ENST00000410055 CAPN11Q9UMQ6 739 aa18.44■□□□□ 0.54
PDK1-203ENST00000410055 MYMKA6NI61 221 aa18.44■□□□□ 0.54
PDK1-203ENST00000410055 GYS1P13807 737 aa18.44■□□□□ 0.54
PDK1-203ENST00000410055 PRPHP41219 470 aa18.44■□□□□ 0.54
PDK1-203ENST00000410055 ADCY7P51828 1080 aa18.44■□□□□ 0.54
PDK1-203ENST00000410055 HERVK_113P62684 666 aa18.44■□□□□ 0.54
PDK1-203ENST00000410055 VSNL1P62760 191 aa18.44■□□□□ 0.54
PDK1-203ENST00000410055 CACNB1Q02641 598 aaPredicted RBP18.44■□□□□ 0.54
PDK1-203ENST00000410055 SMCR8Q8TEV9 937 aaPredicted RBP18.44■□□□□ 0.54
PDK1-203ENST00000410055 PARD3BQ8TEW8 1205 aa18.44■□□□□ 0.54
PDK1-203ENST00000410055 TATDN2Q93075 761 aa18.44■□□□□ 0.54
PDK1-203ENST00000410055 PSMB7Q99436 277 aa18.44■□□□□ 0.54
PDK1-203ENST00000410055 ZHX3Q9H4I2 956 aa18.44■□□□□ 0.54
PDK1-203ENST00000410055 NHEJ1Q9H9Q4 299 aaPredicted RBP18.44■□□□□ 0.54
PDK1-203ENST00000410055 DDX4Q9NQI0 724 aaKnown RBP18.44■□□□□ 0.54
PDK1-203ENST00000410055 BICDL2A1A5D9 508 aa18.43■□□□□ 0.54
PDK1-203ENST00000410055 RCCD1A6NED2 376 aa18.43■□□□□ 0.54
PDK1-203ENST00000410055 TTC36A6NLP5 189 aa18.43■□□□□ 0.54
PDK1-203ENST00000410055 TCP10Q12799 353 aa18.43■□□□□ 0.54
PDK1-203ENST00000410055 SNED1Q8TER0 1413 aa18.43■□□□□ 0.54
PDK1-203ENST00000410055 JAKMIP2Q96AA8 810 aa18.43■□□□□ 0.54
PDK1-203ENST00000410055 AK8Q96MA6 479 aa18.43■□□□□ 0.54
PDK1-203ENST00000410055 MYBL2P10244 700 aa18.43■□□□□ 0.54
PDK1-203ENST00000410055 NAA25Q14CX7 972 aa18.43■□□□□ 0.54
PDK1-203ENST00000410055 FKBP15Q5T1M5 1219 aa18.43■□□□□ 0.54
PDK1-203ENST00000410055 CCDC155Q8N6L0 562 aa18.43■□□□□ 0.54
PDK1-203ENST00000410055 CAGE1Q8TC20 777 aa18.43■□□□□ 0.54
PDK1-203ENST00000410055 SEMA6BQ9H3T3 888 aa18.43■□□□□ 0.54
PDK1-203ENST00000410055 KANSL2Q9H9L4 492 aa18.43■□□□□ 0.54
PDK1-203ENST00000410055 JADE2Q9NQC1 790 aa18.43■□□□□ 0.54
PDK1-203ENST00000410055 MTMR4Q9NYA4 1195 aa18.43■□□□□ 0.54
PDK1-203ENST00000410055 ZNF219Q9P2Y4 722 aaPredicted RBP18.43■□□□□ 0.54
PDK1-203ENST00000410055 L1RE1Q9UN81 338 aa18.43■□□□□ 0.54
PDK1-203ENST00000410055 EPB41L3Q9Y2J2 1087 aaPredicted RBP18.43■□□□□ 0.54
PDK1-203ENST00000410055 ROBO3Q96MS0 1386 aa18.43■□□□□ 0.54
PDK1-203ENST00000410055 GRB10Q13322 594 aa18.42■□□□□ 0.54
PDK1-203ENST00000410055 ENOX2Q16206 610 aaKnown RBP18.42■□□□□ 0.54
PDK1-203ENST00000410055 TMEM266Q2M3C6 531 aa18.42■□□□□ 0.54
PDK1-203ENST00000410055 USP40Q9NVE5 1235 aa18.42■□□□□ 0.54
PDK1-203ENST00000410055 LRRIQ3A6PVS8 624 aaPredicted RBP18.42■□□□□ 0.54
PDK1-203ENST00000410055 SRGNP10124 158 aa18.42■□□□□ 0.54
PDK1-203ENST00000410055 CNNM4Q6P4Q7 775 aa18.42■□□□□ 0.54
PDK1-203ENST00000410055 KCNK18Q7Z418 384 aa18.42■□□□□ 0.54
PDK1-203ENST00000410055 C2CD5Q86YS7 1000 aa18.42■□□□□ 0.54
PDK1-203ENST00000410055 LARP4BQ92615 738 aaKnown RBP18.42■□□□□ 0.54
PDK1-203ENST00000410055 ZBTB10Q96DT7 871 aa18.42■□□□□ 0.54
PDK1-203ENST00000410055 ZNF185O15231 689 aa18.42■□□□□ 0.54
PDK1-203ENST00000410055 SLF2Q8IX21 1173 aa18.42■□□□□ 0.54
PDK1-203ENST00000410055 ANKRD13CQ8N6S4 541 aa18.42■□□□□ 0.54
PDK1-203ENST00000410055 CCDC42Q96M95 316 aa18.42■□□□□ 0.54
PDK1-203ENST00000410055 RPS6KL1Q9Y6S9 549 aa18.42■□□□□ 0.54
PDK1-203ENST00000410055 RASSF10A6NK89 507 aa18.41■□□□□ 0.54
PDK1-203ENST00000410055 CYLC1P35663 651 aaPredicted RBP18.41■□□□□ 0.54
PDK1-203ENST00000410055 MRPS25P82663 173 aaKnown RBP18.41■□□□□ 0.54
PDK1-203ENST00000410055 KRT79Q5XKE5 535 aa18.41■□□□□ 0.54
PDK1-203ENST00000410055 DNAJC7Q99615 494 aa18.41■□□□□ 0.54
PDK1-203ENST00000410055 ZC3H12CQ9C0D7 883 aaKnown RBP18.41■□□□□ 0.54
PDK1-203ENST00000410055 EPHB6O15197 1021 aa18.41■□□□□ 0.54
PDK1-203ENST00000410055 RPSAP08865 295 aaKnown RBP18.41■□□□□ 0.54
PDK1-203ENST00000410055 IL1R1P14778 569 aa18.41■□□□□ 0.54
PDK1-203ENST00000410055 SNAP25P60880 206 aa18.41■□□□□ 0.54
PDK1-203ENST00000410055 SHROOM1Q2M3G4 852 aaPredicted RBP18.41■□□□□ 0.54
PDK1-203ENST00000410055 ADGRF4Q8IZF3 695 aa18.41■□□□□ 0.54
PDK1-203ENST00000410055 C7orf25Q9BPX7 421 aa18.41■□□□□ 0.54
PDK1-203ENST00000410055 NUCKS1Q9H1E3 243 aaKnown RBP18.41■□□□□ 0.54
PDK1-203ENST00000410055 HAUS4Q9H6D7 363 aa18.41■□□□□ 0.54
PDK1-203ENST00000410055 BLOC1S4Q9NUP1 217 aa18.41■□□□□ 0.54
PDK1-203ENST00000410055 WDR3Q9UNX4 943 aaKnown RBP eCLIP18.41■□□□□ 0.54
PDK1-203ENST00000410055 A0A1W2PQC6 194 aa18.4■□□□□ 0.54
PDK1-203ENST00000410055 USP17L10C9JJH3 530 aa18.4■□□□□ 0.54
PDK1-203ENST00000410055 CHUKO15111 745 aa18.4■□□□□ 0.54
PDK1-203ENST00000410055 KRT86O43790 486 aa18.4■□□□□ 0.54
PDK1-203ENST00000410055 MYL1P05976 194 aa18.4■□□□□ 0.54
PDK1-203ENST00000410055 ADCY2Q08462 1091 aa18.4■□□□□ 0.54
PDK1-203ENST00000410055 PNMA5Q96PV4 448 aa18.4■□□□□ 0.54
PDK1-203ENST00000410055 MMS19Q96T76 1030 aa18.4■□□□□ 0.54
PDK1-203ENST00000410055 BTAF1O14981 1849 aa18.4■□□□□ 0.54
PDK1-203ENST00000410055 USP17L15C9J2P7 530 aa18.4■□□□□ 0.54
PDK1-203ENST00000410055 USP17L13C9JLJ4 530 aa18.4■□□□□ 0.54
PDK1-203ENST00000410055 USP17L11C9JVI0 530 aa18.4■□□□□ 0.54
PDK1-203ENST00000410055 USP17L18D6R9N7 530 aa18.4■□□□□ 0.54
PDK1-203ENST00000410055 USP17L22D6RA61 530 aa18.4■□□□□ 0.54
PDK1-203ENST00000410055 USP17L17D6RBQ6 530 aa18.4■□□□□ 0.54
PDK1-203ENST00000410055 USP17L19D6RCP7 530 aa18.4■□□□□ 0.54
PDK1-203ENST00000410055 USP17L20D6RJB6 530 aa18.4■□□□□ 0.54
PDK1-203ENST00000410055 FECHP22830 423 aa18.4■□□□□ 0.54
PDK1-203ENST00000410055 DNA2P51530 1060 aa18.4■□□□□ 0.54
PDK1-203ENST00000410055 USP17L24Q0WX57 530 aa18.4■□□□□ 0.54
PDK1-203ENST00000410055 USP17L6PQ6QN14 398 aa18.4■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms