RNA–Protein interactions for RNA: ENST00000409050.1

SCN1A-203, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 5 BASIC

Gene SCN1A, Length 5,946 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-203ENST00000409050 STK38LQ9Y2H1 464 aa6.6□□□□□ -1.35
SCN1A-203ENST00000409050 ATP7AQ04656 1500 aa6.59□□□□□ -1.35
SCN1A-203ENST00000409050 SPECC1L-ADORA2AF8WAN1 911 aa6.59□□□□□ -1.35
SCN1A-203ENST00000409050 KRT38O76015 456 aa6.59□□□□□ -1.35
SCN1A-203ENST00000409050 FDX1P10109 184 aa6.59□□□□□ -1.35
SCN1A-203ENST00000409050 HSPD1P10809 573 aaKnown RBP6.59□□□□□ -1.35
SCN1A-203ENST00000409050 PDIA3P30101 505 aaKnown RBP6.59□□□□□ -1.35
SCN1A-203ENST00000409050 MDM2Q00987 491 aaPredicted RBP6.59□□□□□ -1.35
SCN1A-203ENST00000409050 GUCY2DQ02846 1103 aa6.59□□□□□ -1.35
SCN1A-203ENST00000409050 KRT80Q6KB66 452 aa6.59□□□□□ -1.35
SCN1A-203ENST00000409050 NUDCD1Q96RS6 583 aa6.59□□□□□ -1.35
SCN1A-203ENST00000409050 CARD14Q9BXL6 1004 aa6.59□□□□□ -1.35
SCN1A-203ENST00000409050 STRIP2Q9ULQ0 834 aa6.59□□□□□ -1.35
SCN1A-203ENST00000409050 ESYT2A0FGR8 921 aa6.59□□□□□ -1.35
SCN1A-203ENST00000409050 POTEB3A0JP26 581 aa6.59□□□□□ -1.35
SCN1A-203ENST00000409050 TMEM247A6NEH6 219 aa6.59□□□□□ -1.35
SCN1A-203ENST00000409050 PDE6AP16499 860 aa6.59□□□□□ -1.35
SCN1A-203ENST00000409050 MAPK4P31152 587 aa6.59□□□□□ -1.35
SCN1A-203ENST00000409050 ECE1P42892 770 aa6.59□□□□□ -1.35
SCN1A-203ENST00000409050 PAPOLAP51003 745 aaKnown RBP6.59□□□□□ -1.35
SCN1A-203ENST00000409050 TRADDQ15628 312 aa6.59□□□□□ -1.35
SCN1A-203ENST00000409050 ARHGAP44Q17R89 818 aa6.59□□□□□ -1.35
SCN1A-203ENST00000409050 SGO2Q562F6 1265 aa6.59□□□□□ -1.35
SCN1A-203ENST00000409050 NXNQ6DKJ4 435 aa6.59□□□□□ -1.35
SCN1A-203ENST00000409050 POTEBQ6S5H4 581 aa6.59□□□□□ -1.35
SCN1A-203ENST00000409050 TRIM72Q6ZMU5 477 aa6.59□□□□□ -1.35
SCN1A-203ENST00000409050 TRMT2AQ8IZ69 625 aaKnown RBP6.59□□□□□ -1.35
SCN1A-203ENST00000409050 HDAC11Q96DB2 347 aa6.59□□□□□ -1.35
SCN1A-203ENST00000409050 PAWRQ96IZ0 340 aaKnown RBP6.59□□□□□ -1.35
SCN1A-203ENST00000409050 PLIN2Q99541 437 aa6.59□□□□□ -1.35
SCN1A-203ENST00000409050 MAGEB5Q9BZ81 275 aa6.59□□□□□ -1.35
SCN1A-203ENST00000409050 SEL1LQ9UBV2 794 aa6.59□□□□□ -1.35
SCN1A-203ENST00000409050 TNKSO95271 1327 aa6.59□□□□□ -1.35
SCN1A-203ENST00000409050 PLEKHG2Q9H7P9 1386 aa6.59□□□□□ -1.35
SCN1A-203ENST00000409050 PTPRKQ15262 1439 aa6.59□□□□□ -1.35
SCN1A-203ENST00000409050 ADGBQ8N7X0 1667 aa6.59□□□□□ -1.35
SCN1A-203ENST00000409050 PVALEFA0A1B0GWK0 134 aa6.59□□□□□ -1.35
SCN1A-203ENST00000409050 CHMP2AO43633 222 aa6.59□□□□□ -1.35
SCN1A-203ENST00000409050 EFCAB14O75071 495 aa6.59□□□□□ -1.35
SCN1A-203ENST00000409050 BAG2O95816 211 aa6.59□□□□□ -1.35
SCN1A-203ENST00000409050 IFNB1P01574 187 aa6.59□□□□□ -1.35
SCN1A-203ENST00000409050 NR1D1P20393 614 aa6.59□□□□□ -1.35
SCN1A-203ENST00000409050 YWHAGP61981 247 aaKnown RBP eCLIP6.59□□□□□ -1.35
SCN1A-203ENST00000409050 NOP14P78316 857 aaKnown RBP6.59□□□□□ -1.35
SCN1A-203ENST00000409050 ARL13BQ3SXY8 428 aa6.59□□□□□ -1.35
SCN1A-203ENST00000409050 PLA2G4DQ86XP0 818 aa6.59□□□□□ -1.35
SCN1A-203ENST00000409050 NIM1KQ8IY84 436 aa6.59□□□□□ -1.35
SCN1A-203ENST00000409050 GIMAP8Q8ND71 665 aaPredicted RBP6.59□□□□□ -1.35
SCN1A-203ENST00000409050 BANK1Q8NDB2 785 aa6.59□□□□□ -1.35
SCN1A-203ENST00000409050 ZFP91Q96JP5 570 aaPredicted RBP6.59□□□□□ -1.35
SCN1A-203ENST00000409050 SLITRK6Q9H5Y7 841 aa6.59□□□□□ -1.35
SCN1A-203ENST00000409050 CYP26B1Q9NR63 512 aa6.59□□□□□ -1.35
SCN1A-203ENST00000409050 FANCLQ9NW38 375 aa6.59□□□□□ -1.35
SCN1A-203ENST00000409050 UBE4BO95155 1302 aa6.59□□□□□ -1.35
SCN1A-203ENST00000409050 TMEM232C9JQI7 657 aa6.59□□□□□ -1.35
SCN1A-203ENST00000409050 KLRF2D3W0D1 207 aa6.59□□□□□ -1.35
SCN1A-203ENST00000409050 F8W031 263 aaPredicted RBP6.59□□□□□ -1.35
SCN1A-203ENST00000409050 H7C0C1 242 aa6.59□□□□□ -1.35
SCN1A-203ENST00000409050 ZAP70P43403 619 aa6.59□□□□□ -1.35
SCN1A-203ENST00000409050 ATP5OP48047 213 aa6.59□□□□□ -1.35
SCN1A-203ENST00000409050 ADKP55263 362 aaKnown RBP6.59□□□□□ -1.35
SCN1A-203ENST00000409050 TIMM10P62072 90 aa6.59□□□□□ -1.35
SCN1A-203ENST00000409050 IQCB1Q15051 598 aa6.59□□□□□ -1.35
SCN1A-203ENST00000409050 TAF1BQ53T94 588 aaPredicted RBP6.59□□□□□ -1.35
SCN1A-203ENST00000409050 XKR9Q5GH70 373 aa6.59□□□□□ -1.35
SCN1A-203ENST00000409050 ARHGEF16Q5VV41 709 aa6.59□□□□□ -1.35
SCN1A-203ENST00000409050 TPH2Q8IWU9 490 aa6.59□□□□□ -1.35
SCN1A-203ENST00000409050 NELFCDQ8IXH7 590 aa6.59□□□□□ -1.35
SCN1A-203ENST00000409050 FAM186BQ8IYM0 893 aa6.59□□□□□ -1.35
SCN1A-203ENST00000409050 EFHBQ8N7U6 833 aa6.59□□□□□ -1.35
SCN1A-203ENST00000409050 CNKSR1Q969H4 720 aa6.59□□□□□ -1.35
SCN1A-203ENST00000409050 PHACTR3Q96KR7 559 aa6.59□□□□□ -1.35
SCN1A-203ENST00000409050 FAM167AQ96KS9 214 aa6.59□□□□□ -1.35
SCN1A-203ENST00000409050 FMO2Q99518 471 aa6.59□□□□□ -1.35
SCN1A-203ENST00000409050 TRIM55Q9BYV6 548 aa6.59□□□□□ -1.35
SCN1A-203ENST00000409050 VIPAS39Q9H9C1 493 aa6.59□□□□□ -1.35
SCN1A-203ENST00000409050 PDE11AQ9HCR9 933 aa6.59□□□□□ -1.35
SCN1A-203ENST00000409050 SPAG7O75391 227 aa6.58□□□□□ -1.36
SCN1A-203ENST00000409050 KRT19P08727 400 aa6.58□□□□□ -1.36
SCN1A-203ENST00000409050 CLTAP09496 248 aa6.58□□□□□ -1.36
SCN1A-203ENST00000409050 MYCLP12524 364 aaPredicted RBP6.58□□□□□ -1.36
SCN1A-203ENST00000409050 GUCY2CP25092 1073 aa6.58□□□□□ -1.36
SCN1A-203ENST00000409050 GUCY2FP51841 1108 aa6.58□□□□□ -1.36
SCN1A-203ENST00000409050 RWDD2BP57060 319 aa6.58□□□□□ -1.36
SCN1A-203ENST00000409050 MIS18BP1Q6P0N0 1132 aa6.58□□□□□ -1.36
SCN1A-203ENST00000409050 OR9Q1Q8NGQ5 310 aa6.58□□□□□ -1.36
SCN1A-203ENST00000409050 TIPINQ9BVW5 301 aa6.58□□□□□ -1.36
SCN1A-203ENST00000409050 LSG1Q9H089 658 aaKnown RBP6.58□□□□□ -1.36
SCN1A-203ENST00000409050 TFCP2L1Q9NZI6 479 aa6.58□□□□□ -1.36
SCN1A-203ENST00000409050 CREB3O43889 395 aa6.58□□□□□ -1.36
SCN1A-203ENST00000409050 GADD45BO75293 160 aaPredicted RBP6.58□□□□□ -1.36
SCN1A-203ENST00000409050 APOEP02649 317 aa6.58□□□□□ -1.36
SCN1A-203ENST00000409050 PYGLP06737 847 aa6.58□□□□□ -1.36
SCN1A-203ENST00000409050 MX2P20592 715 aa6.58□□□□□ -1.36
SCN1A-203ENST00000409050 CIITAP33076 1130 aa6.58□□□□□ -1.36
SCN1A-203ENST00000409050 PIK3CAP42336 1068 aa6.58□□□□□ -1.36
SCN1A-203ENST00000409050 CDR2Q01850 454 aa6.58□□□□□ -1.36
SCN1A-203ENST00000409050 BIRC2Q13490 618 aa6.58□□□□□ -1.36
SCN1A-203ENST00000409050 MED21Q13503 144 aa6.58□□□□□ -1.36
SCN1A-203ENST00000409050 LAMB3Q13751 1172 aa6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 110.5 ms