RNA–Protein interactions for RNA: ENST00000402326.1

CBX3P9-201, Transcript of chromobox 3 pseudogene 9, humanhuman

BASIC

Gene CBX3P9, Length 552 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3P9-201ENST00000402326 PCBP1Q15365 356 aaKnown RBP eCLIP3.4□□□□□ -1.87
CBX3P9-201ENST00000402326 CT47A1Q5JQC4 288 aaPredicted RBP3.4□□□□□ -1.87
CBX3P9-201ENST00000402326 ADGRF1Q5T601 910 aa3.4□□□□□ -1.87
CBX3P9-201ENST00000402326 MROH9Q5TGP6 573 aa3.4□□□□□ -1.87
CBX3P9-201ENST00000402326 DDX42Q86XP3 938 aaKnown RBP eCLIP3.4□□□□□ -1.87
CBX3P9-201ENST00000402326 RIOX2Q8IUF8 465 aa3.4□□□□□ -1.87
CBX3P9-201ENST00000402326 Q8N1Y9 231 aa3.4□□□□□ -1.87
CBX3P9-201ENST00000402326 PRPF38AQ8NAV1 312 aaKnown RBP3.4□□□□□ -1.87
CBX3P9-201ENST00000402326 LEO1Q8WVC0 666 aaPredicted RBP3.4□□□□□ -1.87
CBX3P9-201ENST00000402326 DDX1Q92499 740 aaKnown RBP3.4□□□□□ -1.87
CBX3P9-201ENST00000402326 FAM168AQ92567 244 aa3.4□□□□□ -1.87
CBX3P9-201ENST00000402326 INTS4Q96HW7 963 aaKnown RBP3.4□□□□□ -1.87
CBX3P9-201ENST00000402326 CDIP1Q9H305 208 aa3.4□□□□□ -1.87
CBX3P9-201ENST00000402326 INTS7Q9NVH2 962 aaKnown RBP3.4□□□□□ -1.87
CBX3P9-201ENST00000402326 KLHL42Q9P2K6 505 aa3.4□□□□□ -1.87
CBX3P9-201ENST00000402326 MAGEC2Q9UBF1 373 aaPredicted RBP3.4□□□□□ -1.87
CBX3P9-201ENST00000402326 FBXL7Q9UJT9 491 aa3.4□□□□□ -1.87
CBX3P9-201ENST00000402326 ATP8A1Q9Y2Q0 1164 aa3.4□□□□□ -1.87
CBX3P9-201ENST00000402326 X6R8D5 127 aa3.4□□□□□ -1.87
CBX3P9-201ENST00000402326 TCRBV16S1A1N1A0A5B0 115 aa3.39□□□□□ -1.87
CBX3P9-201ENST00000402326 OR14I1A6ND48 311 aa3.39□□□□□ -1.87
CBX3P9-201ENST00000402326 B4E1Z4 1266 aa3.39□□□□□ -1.87
CBX3P9-201ENST00000402326 ARVCFO00192 962 aa3.39□□□□□ -1.87
CBX3P9-201ENST00000402326 SRGAP3O43295 1099 aa3.39□□□□□ -1.87
CBX3P9-201ENST00000402326 MARCH6O60337 910 aa3.39□□□□□ -1.87
CBX3P9-201ENST00000402326 KPNA6O60684 536 aa3.39□□□□□ -1.87
CBX3P9-201ENST00000402326 DGKIO75912 1065 aa3.39□□□□□ -1.87
CBX3P9-201ENST00000402326 ASLP04424 464 aa3.39□□□□□ -1.87
CBX3P9-201ENST00000402326 NTRK1P04629 796 aa3.39□□□□□ -1.87
CBX3P9-201ENST00000402326 CYBBP04839 570 aa3.39□□□□□ -1.87
CBX3P9-201ENST00000402326 DBHP09172 617 aa3.39□□□□□ -1.87
CBX3P9-201ENST00000402326 GLI4P10075 376 aa3.39□□□□□ -1.87
CBX3P9-201ENST00000402326 IGFALSP35858 605 aa3.39□□□□□ -1.87
CBX3P9-201ENST00000402326 PDE6BP35913 854 aa3.39□□□□□ -1.87
CBX3P9-201ENST00000402326 FLT3P36888 993 aa3.39□□□□□ -1.87
CBX3P9-201ENST00000402326 NEK4P51957 841 aa3.39□□□□□ -1.87
CBX3P9-201ENST00000402326 ST5P78524 1137 aa3.39□□□□□ -1.87
CBX3P9-201ENST00000402326 TMEM62Q0P6H9 643 aa3.39□□□□□ -1.87
CBX3P9-201ENST00000402326 FAM50AQ14320 339 aaKnown RBP3.39□□□□□ -1.87
CBX3P9-201ENST00000402326 NR1I3Q14994 352 aa3.39□□□□□ -1.87
CBX3P9-201ENST00000402326 PLEKHG6Q3KR16 790 aa3.39□□□□□ -1.87
CBX3P9-201ENST00000402326 WWC2Q6AWC2 1192 aa3.39□□□□□ -1.87
CBX3P9-201ENST00000402326 PAQR3Q6TCH7 311 aa3.39□□□□□ -1.87
CBX3P9-201ENST00000402326 MPZL3Q6UWV2 235 aa3.39□□□□□ -1.87
CBX3P9-201ENST00000402326 SPOCD1Q6ZMY3 1216 aa3.39□□□□□ -1.87
CBX3P9-201ENST00000402326 NLRP10Q86W26 655 aa3.39□□□□□ -1.87
CBX3P9-201ENST00000402326 IRF2BP1Q8IU81 584 aa3.39□□□□□ -1.87
CBX3P9-201ENST00000402326 ZC3H7AQ8IWR0 971 aaKnown RBP3.39□□□□□ -1.87
CBX3P9-201ENST00000402326 NETO2Q8NC67 525 aa3.39□□□□□ -1.87
CBX3P9-201ENST00000402326 JAM3Q9BX67 310 aa3.39□□□□□ -1.87
CBX3P9-201ENST00000402326 MTFR1LQ9H019 292 aa3.39□□□□□ -1.87
CBX3P9-201ENST00000402326 TMX1Q9H3N1 280 aa3.39□□□□□ -1.87
CBX3P9-201ENST00000402326 EPB41L1Q9H4G0 881 aa3.39□□□□□ -1.87
CBX3P9-201ENST00000402326 IPPKQ9H8X2 491 aa3.39□□□□□ -1.87
CBX3P9-201ENST00000402326 TNFRSF12AQ9NP84 129 aa3.39□□□□□ -1.87
CBX3P9-201ENST00000402326 FAM53CQ9NYF3 392 aa3.39□□□□□ -1.87
CBX3P9-201ENST00000402326 PPARGC1AQ9UBK2 798 aaKnown RBP3.39□□□□□ -1.87
CBX3P9-201ENST00000402326 FBLN5Q9UBX5 448 aa3.39□□□□□ -1.87
CBX3P9-201ENST00000402326 NUDT5Q9UKK9 219 aa3.39□□□□□ -1.87
CBX3P9-201ENST00000402326 G3BP2Q9UN86 482 aaKnown RBP3.39□□□□□ -1.87
CBX3P9-201ENST00000402326 ZC3H12DA2A288 527 aaKnown RBP3.38□□□□□ -1.87
CBX3P9-201ENST00000402326 ZNF503-AS2A6NEH8 195 aa3.38□□□□□ -1.87
CBX3P9-201ENST00000402326 NUDT19A8MXV4 375 aa3.38□□□□□ -1.87
CBX3P9-201ENST00000402326 F8W031 263 aaPredicted RBP3.38□□□□□ -1.87
CBX3P9-201ENST00000402326 KRIT1O00522 736 aa3.38□□□□□ -1.87
CBX3P9-201ENST00000402326 ABLIM1O14639 778 aa3.38□□□□□ -1.87
CBX3P9-201ENST00000402326 WNT9AO14904 365 aa3.38□□□□□ -1.87
CBX3P9-201ENST00000402326 ZBTB7AO95365 584 aa3.38□□□□□ -1.87
CBX3P9-201ENST00000402326 NPTXRO95502 500 aa3.38□□□□□ -1.87
CBX3P9-201ENST00000402326 PDGFRBP09619 1106 aa3.38□□□□□ -1.87
CBX3P9-201ENST00000402326 JMJD7P0C870 316 aa3.38□□□□□ -1.87
CBX3P9-201ENST00000402326 SRGAP2CP0DJJ0 459 aa3.38□□□□□ -1.87
CBX3P9-201ENST00000402326 KCNA6P17658 529 aa3.38□□□□□ -1.87
CBX3P9-201ENST00000402326 SDHBP21912 280 aa3.38□□□□□ -1.87
CBX3P9-201ENST00000402326 SOX5P35711 763 aa3.38□□□□□ -1.87
CBX3P9-201ENST00000402326 SLC6A11P48066 632 aa3.38□□□□□ -1.87
CBX3P9-201ENST00000402326 SPIRE1Q08AE8 756 aa3.38□□□□□ -1.87
CBX3P9-201ENST00000402326 STRN3Q13033 797 aa3.38□□□□□ -1.87
CBX3P9-201ENST00000402326 RAB3GAP1Q15042 981 aa3.38□□□□□ -1.87
CBX3P9-201ENST00000402326 CHRNA2Q15822 529 aa3.38□□□□□ -1.87
CBX3P9-201ENST00000402326 SEPT7Q16181 437 aaKnown RBP3.38□□□□□ -1.87
CBX3P9-201ENST00000402326 SKOR2Q2VWA4 1001 aaPredicted RBP3.38□□□□□ -1.87
CBX3P9-201ENST00000402326 FAM47CQ5HY64 1035 aa3.38□□□□□ -1.87
CBX3P9-201ENST00000402326 PKN3Q6P5Z2 889 aa3.38□□□□□ -1.87
CBX3P9-201ENST00000402326 ABHD17CQ6PCB6 329 aa3.38□□□□□ -1.87
CBX3P9-201ENST00000402326 LHFPL2Q6ZUX7 228 aa3.38□□□□□ -1.87
CBX3P9-201ENST00000402326 UBE2R2Q712K3 238 aaPredicted RBP3.38□□□□□ -1.87
CBX3P9-201ENST00000402326 C16orf59Q7L2K0 433 aa3.38□□□□□ -1.87
CBX3P9-201ENST00000402326 FERMT3Q86UX7 667 aa3.38□□□□□ -1.87
CBX3P9-201ENST00000402326 DCP2Q8IU60 420 aaKnown RBP3.38□□□□□ -1.87
CBX3P9-201ENST00000402326 AFAP1L2Q8N4X5 818 aa3.38□□□□□ -1.87
CBX3P9-201ENST00000402326 PCDH19Q8TAB3 1148 aa3.38□□□□□ -1.87
CBX3P9-201ENST00000402326 PANK1Q8TE04 598 aa3.38□□□□□ -1.87
CBX3P9-201ENST00000402326 FBXW5Q969U6 566 aa3.38□□□□□ -1.87
CBX3P9-201ENST00000402326 PEX11GQ96HA9 241 aa3.38□□□□□ -1.87
CBX3P9-201ENST00000402326 KCNJ15Q99712 375 aa3.38□□□□□ -1.87
CBX3P9-201ENST00000402326 AP5M1Q9H0R1 490 aa3.38□□□□□ -1.87
CBX3P9-201ENST00000402326 HOMER2Q9NSB8 354 aa3.38□□□□□ -1.87
CBX3P9-201ENST00000402326 CATSPERZQ9NTU4 200 aa3.38□□□□□ -1.87
CBX3P9-201ENST00000402326 DBR1Q9UK59 544 aaKnown RBP3.38□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms