RNA–Protein interactions for RNA: ENST00000400960.6

CR1-206, Transcript of complement C3b/C4b receptor 1 (Knops blood group), humanhuman

TSL 1 (best) BASIC

Gene CR1, Length 6,959 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CR1-206ENST00000400960 ZNF577Q9BSK1 485 aa9.39□□□□□ -0.91
CR1-206ENST00000400960 TMEM232C9JQI7 657 aa9.38□□□□□ -0.91
CR1-206ENST00000400960 ZNF500O60304 480 aaPredicted RBP9.38□□□□□ -0.91
CR1-206ENST00000400960 CTNND1O60716 968 aaKnown RBP9.38□□□□□ -0.91
CR1-206ENST00000400960 CD58P19256 250 aa9.38□□□□□ -0.91
CR1-206ENST00000400960 CMA1P23946 247 aa9.38□□□□□ -0.91
CR1-206ENST00000400960 EPHB4P54760 987 aa9.38□□□□□ -0.91
CR1-206ENST00000400960 SMAD1Q15797 465 aaKnown RBP9.38□□□□□ -0.91
CR1-206ENST00000400960 TTLL11Q8NHH1 800 aa9.38□□□□□ -0.91
CR1-206ENST00000400960 GINM1Q9NU53 330 aa9.38□□□□□ -0.91
CR1-206ENST00000400960 PCDHA13Q9Y5I0 950 aa9.38□□□□□ -0.91
CR1-206ENST00000400960 GOLGA8QA0A0J9YX86 632 aa9.38□□□□□ -0.91
CR1-206ENST00000400960 GOLGA8OA6NCC3 632 aa9.38□□□□□ -0.91
CR1-206ENST00000400960 GOLGA8NF8WBI6 632 aa9.38□□□□□ -0.91
CR1-206ENST00000400960 PDHA1P08559 390 aa9.38□□□□□ -0.91
CR1-206ENST00000400960 DHX9Q08211 1270 aaKnown RBP9.38□□□□□ -0.91
CR1-206ENST00000400960 LRRC24Q50LG9 513 aa9.38□□□□□ -0.91
CR1-206ENST00000400960 LRRC23Q53EV4 343 aaPredicted RBP9.38□□□□□ -0.91
CR1-206ENST00000400960 C16orf87Q6PH81 154 aa9.38□□□□□ -0.91
CR1-206ENST00000400960 RAPGEF5Q92565 580 aa9.38□□□□□ -0.91
CR1-206ENST00000400960 ANKRD65E5RJM6 399 aa9.38□□□□□ -0.91
CR1-206ENST00000400960 HSPD1P10809 573 aaKnown RBP9.38□□□□□ -0.91
CR1-206ENST00000400960 IL13P35225 146 aa9.38□□□□□ -0.91
CR1-206ENST00000400960 RGS9BPQ6ZS82 235 aa9.38□□□□□ -0.91
CR1-206ENST00000400960 CHURC1Q8WUH1 139 aa9.38□□□□□ -0.91
CR1-206ENST00000400960 FTOQ9C0B1 505 aaKnown RBP eCLIP9.38□□□□□ -0.91
CR1-206ENST00000400960 STRIP2Q9ULQ0 834 aa9.38□□□□□ -0.91
CR1-206ENST00000400960 DMRT2Q9Y5R5 561 aa9.38□□□□□ -0.91
CR1-206ENST00000400960 hCG_2014768A0A024R1R8 64 aa9.38□□□□□ -0.91
CR1-206ENST00000400960 BNIP3LO60238 219 aa9.38□□□□□ -0.91
CR1-206ENST00000400960 PSMC2P35998 433 aaKnown RBP9.38□□□□□ -0.91
CR1-206ENST00000400960 SLC16A2P36021 539 aa9.38□□□□□ -0.91
CR1-206ENST00000400960 SLMAPQ14BN4 828 aa9.38□□□□□ -0.91
CR1-206ENST00000400960 C7orf31Q8N865 590 aa9.38□□□□□ -0.91
CR1-206ENST00000400960 CALN1Q9BXU9 219 aa9.38□□□□□ -0.91
CR1-206ENST00000400960 HAUS4Q9H6D7 363 aa9.38□□□□□ -0.91
CR1-206ENST00000400960 GCNT4Q9P109 453 aa9.38□□□□□ -0.91
CR1-206ENST00000400960 COL4A3BPQ9Y5P4 624 aa9.38□□□□□ -0.91
CR1-206ENST00000400960 PI4K2BG5E9Z4 385 aa9.38□□□□□ -0.91
CR1-206ENST00000400960 TADA3O75528 432 aa9.38□□□□□ -0.91
CR1-206ENST00000400960 NR2F2P24468 414 aa9.38□□□□□ -0.91
CR1-206ENST00000400960 FAM160B1Q5W0V3 765 aa9.38□□□□□ -0.91
CR1-206ENST00000400960 NCLNQ969V3 563 aa9.38□□□□□ -0.91
CR1-206ENST00000400960 SLC24A3Q9HC58 644 aa9.38□□□□□ -0.91
CR1-206ENST00000400960 TXLNGQ9NUQ3 528 aa9.38□□□□□ -0.91
CR1-206ENST00000400960 CSADQ9Y600 493 aa9.38□□□□□ -0.91
CR1-206ENST00000400960 MYO1FO00160 1098 aa9.38□□□□□ -0.91
CR1-206ENST00000400960 SH3BGRP55822 239 aaPredicted RBP9.38□□□□□ -0.91
CR1-206ENST00000400960 RNF207Q6ZRF8 634 aa9.38□□□□□ -0.91
CR1-206ENST00000400960 RFX8Q6ZV50 586 aa9.38□□□□□ -0.91
CR1-206ENST00000400960 CENPKQ9BS16 269 aa9.38□□□□□ -0.91
CR1-206ENST00000400960 KMT5AQ9NQR1 393 aa9.38□□□□□ -0.91
CR1-206ENST00000400960 CDC23Q9UJX2 597 aa9.38□□□□□ -0.91
CR1-206ENST00000400960 WDR3Q9UNX4 943 aaKnown RBP eCLIP9.38□□□□□ -0.91
CR1-206ENST00000400960 ITM2BQ9Y287 266 aa9.38□□□□□ -0.91
CR1-206ENST00000400960 ACSL3O95573 720 aa9.37□□□□□ -0.91
CR1-206ENST00000400960 GUCY2CP25092 1073 aa9.37□□□□□ -0.91
CR1-206ENST00000400960 DDIT3P35638 169 aa9.37□□□□□ -0.91
CR1-206ENST00000400960 NOP14P78316 857 aaKnown RBP9.37□□□□□ -0.91
CR1-206ENST00000400960 RBM6P78332 1123 aaKnown RBP9.37□□□□□ -0.91
CR1-206ENST00000400960 PPP2R5EQ16537 467 aa9.37□□□□□ -0.91
CR1-206ENST00000400960 GRAMD1BQ3KR37 738 aa9.37□□□□□ -0.91
CR1-206ENST00000400960 ZC3H18Q86VM9 953 aaKnown RBP9.37□□□□□ -0.91
CR1-206ENST00000400960 GSPT2Q8IYD1 628 aaKnown RBP9.37□□□□□ -0.91
CR1-206ENST00000400960 NT5C1BQ96P26 610 aa9.37□□□□□ -0.91
CR1-206ENST00000400960 TRPV6Q9H1D0 765 aa9.37□□□□□ -0.91
CR1-206ENST00000400960 TLK1Q9UKI8 766 aa9.37□□□□□ -0.91
CR1-206ENST00000400960 GOLGA8MH3BSY2 632 aa9.37□□□□□ -0.91
CR1-206ENST00000400960 HNRNPDLO14979 420 aaKnown RBP9.37□□□□□ -0.91
CR1-206ENST00000400960 TOM1O60784 492 aa9.37□□□□□ -0.91
CR1-206ENST00000400960 ATP5JP18859 108 aa9.37□□□□□ -0.91
CR1-206ENST00000400960 POLR2BP30876 1174 aaKnown RBP9.37□□□□□ -0.91
CR1-206ENST00000400960 HADHAP40939 763 aa9.37□□□□□ -0.91
CR1-206ENST00000400960 PPP2R5BQ15173 497 aa9.37□□□□□ -0.91
CR1-206ENST00000400960 DPCR1Q3MIW9 517 aa9.37□□□□□ -0.91
CR1-206ENST00000400960 ATG16L1Q676U5 607 aa9.37□□□□□ -0.91
CR1-206ENST00000400960 ZSWIM6Q9HCJ5 1215 aa9.37□□□□□ -0.91
CR1-206ENST00000400960 PDIA3P30101 505 aaKnown RBP9.37□□□□□ -0.91
CR1-206ENST00000400960 LONP1P36776 959 aaKnown RBP9.37□□□□□ -0.91
CR1-206ENST00000400960 KCNA1Q09470 495 aa9.37□□□□□ -0.91
CR1-206ENST00000400960 KIAA0825Q8IV33 1275 aa9.37□□□□□ -0.91
CR1-206ENST00000400960 PACSIN2Q9UNF0 486 aaPredicted RBP9.37□□□□□ -0.91
CR1-206ENST00000400960 PIK3C2GO75747 1445 aa9.37□□□□□ -0.91
CR1-206ENST00000400960 UHRF1BP1LA0JNW5 1464 aa9.37□□□□□ -0.91
CR1-206ENST00000400960 PSDA5PKW4 1024 aaPredicted RBP9.37□□□□□ -0.91
CR1-206ENST00000400960 KCNQ3O43525 872 aa9.37□□□□□ -0.91
CR1-206ENST00000400960 TRIM37O94972 964 aa9.37□□□□□ -0.91
CR1-206ENST00000400960 MCF2P10911 925 aa9.37□□□□□ -0.91
CR1-206ENST00000400960 ESRRAP11474 423 aaPredicted RBP9.37□□□□□ -0.91
CR1-206ENST00000400960 ADORA1P30542 326 aa9.37□□□□□ -0.91
CR1-206ENST00000400960 KRT33BQ14525 404 aa9.37□□□□□ -0.91
CR1-206ENST00000400960 FAM26FQ5R3K3 315 aa9.37□□□□□ -0.91
CR1-206ENST00000400960 TBC1D1Q86TI0 1168 aaPredicted RBP9.37□□□□□ -0.91
CR1-206ENST00000400960 MTRQ99707 1265 aa9.37□□□□□ -0.91
CR1-206ENST00000400960 EIF2AQ9BY44 585 aaKnown RBP9.37□□□□□ -0.91
CR1-206ENST00000400960 SPC25Q9HBM1 224 aa9.37□□□□□ -0.91
CR1-206ENST00000400960 EXOC1LA0A1B0GW35 172 aa9.37□□□□□ -0.91
CR1-206ENST00000400960 GOLGA8IPA6NC78 632 aa9.37□□□□□ -0.91
CR1-206ENST00000400960 GOLGA8JA6NMD2 632 aa9.37□□□□□ -0.91
CR1-206ENST00000400960 EIF3CLB5ME19 914 aaKnown RBP9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms