RNA–Protein interactions for RNA: ENST00000399002.6

SPTLC3-201, Transcript of serine palmitoyltransferase long chain base subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTLC3, Length 6,169 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC3-201ENST00000399002 MRPL40Q9NQ50 206 aaKnown RBP9.07□□□□□ -0.96
SPTLC3-201ENST00000399002 PPP1R9AQ9ULJ8 1098 aa9.07□□□□□ -0.96
SPTLC3-201ENST00000399002 ZNF521Q96K83 1311 aa9.07□□□□□ -0.96
SPTLC3-201ENST00000399002 A0A087WUV0 522 aaPredicted RBP9.07□□□□□ -0.96
SPTLC3-201ENST00000399002 TYW5A2RUC4 315 aaKnown RBP9.07□□□□□ -0.96
SPTLC3-201ENST00000399002 CLGNO14967 610 aa9.07□□□□□ -0.96
SPTLC3-201ENST00000399002 WDR46O15213 610 aaKnown RBP9.07□□□□□ -0.96
SPTLC3-201ENST00000399002 CPP00450 1065 aa9.07□□□□□ -0.96
SPTLC3-201ENST00000399002 PPP2R5DQ14738 602 aa9.07□□□□□ -0.96
SPTLC3-201ENST00000399002 ZYXQ15942 572 aaKnown RBP9.07□□□□□ -0.96
SPTLC3-201ENST00000399002 RESP18Q5W5W9 173 aa9.07□□□□□ -0.96
SPTLC3-201ENST00000399002 EMBQ6PCB8 327 aa9.07□□□□□ -0.96
SPTLC3-201ENST00000399002 RASEFQ8IZ41 740 aa9.07□□□□□ -0.96
SPTLC3-201ENST00000399002 SUDS3Q9H7L9 328 aaPredicted RBP9.07□□□□□ -0.96
SPTLC3-201ENST00000399002 SLC12A6Q9UHW9 1150 aa9.07□□□□□ -0.96
SPTLC3-201ENST00000399002 THRAP3Q9Y2W1 955 aaKnown RBP9.07□□□□□ -0.96
SPTLC3-201ENST00000399002 OPHN1O60890 802 aa9.06□□□□□ -0.96
SPTLC3-201ENST00000399002 NR2F2P24468 414 aa9.06□□□□□ -0.96
SPTLC3-201ENST00000399002 ECE1P42892 770 aa9.06□□□□□ -0.96
SPTLC3-201ENST00000399002 RESTQ13127 1097 aa9.06□□□□□ -0.96
SPTLC3-201ENST00000399002 SCYL2Q6P3W7 929 aa9.06□□□□□ -0.96
SPTLC3-201ENST00000399002 CPXCR1Q8N123 301 aa9.06□□□□□ -0.96
SPTLC3-201ENST00000399002 STAG1Q8WVM7 1258 aa9.06□□□□□ -0.96
SPTLC3-201ENST00000399002 KANSL2Q9H9L4 492 aa9.06□□□□□ -0.96
SPTLC3-201ENST00000399002 PCDHA13Q9Y5I0 950 aa9.06□□□□□ -0.96
SPTLC3-201ENST00000399002 IQANK1A0A1B0GTG1 560 aa9.06□□□□□ -0.96
SPTLC3-201ENST00000399002 BTBD18B2RXH4 712 aa9.06□□□□□ -0.96
SPTLC3-201ENST00000399002 H7C0C1 242 aa9.06□□□□□ -0.96
SPTLC3-201ENST00000399002 SGK1O00141 431 aa9.06□□□□□ -0.96
SPTLC3-201ENST00000399002 ATP5OP48047 213 aa9.06□□□□□ -0.96
SPTLC3-201ENST00000399002 TCP10Q12799 353 aa9.06□□□□□ -0.96
SPTLC3-201ENST00000399002 MMEL1Q495T6 779 aa9.06□□□□□ -0.96
SPTLC3-201ENST00000399002 SLFNL1Q499Z3 407 aa9.06□□□□□ -0.96
SPTLC3-201ENST00000399002 ODR4Q5SWX8 454 aa9.06□□□□□ -0.96
SPTLC3-201ENST00000399002 SLFN12LQ6IEE8 588 aa9.06□□□□□ -0.96
SPTLC3-201ENST00000399002 PPM1KQ8N3J5 372 aa9.06□□□□□ -0.96
SPTLC3-201ENST00000399002 GPKOWQ92917 476 aaPredicted RBP eCLIP9.06□□□□□ -0.96
SPTLC3-201ENST00000399002 CCDC124Q96CT7 223 aaKnown RBP9.06□□□□□ -0.96
SPTLC3-201ENST00000399002 FAM193BQ96PV7 902 aaPredicted RBP9.06□□□□□ -0.96
SPTLC3-201ENST00000399002 BRIP1Q9BX63 1249 aa9.06□□□□□ -0.96
SPTLC3-201ENST00000399002 NHEJ1Q9H9Q4 299 aaPredicted RBP9.06□□□□□ -0.96
SPTLC3-201ENST00000399002 KIAA1024Q9UPX6 916 aa9.06□□□□□ -0.96
SPTLC3-201ENST00000399002 PODXLO00592 558 aa9.06□□□□□ -0.96
SPTLC3-201ENST00000399002 ALAS1P13196 640 aa9.06□□□□□ -0.96
SPTLC3-201ENST00000399002 RFX1P22670 979 aa9.06□□□□□ -0.96
SPTLC3-201ENST00000399002 BCAMP50895 628 aa9.06□□□□□ -0.96
SPTLC3-201ENST00000399002 SGO2Q562F6 1265 aa9.06□□□□□ -0.96
SPTLC3-201ENST00000399002 TBRG4Q969Z0 631 aaKnown RBP eCLIP9.06□□□□□ -0.96
SPTLC3-201ENST00000399002 KMT5AQ9NQR1 393 aa9.06□□□□□ -0.96
SPTLC3-201ENST00000399002 LDHAP00338 332 aaKnown RBP9.06□□□□□ -0.96
SPTLC3-201ENST00000399002 PSAPP07602 524 aa9.06□□□□□ -0.96
SPTLC3-201ENST00000399002 METTL13Q8N6R0 699 aa9.06□□□□□ -0.96
SPTLC3-201ENST00000399002 ZNF653Q96CK0 615 aa9.06□□□□□ -0.96
SPTLC3-201ENST00000399002 CLIC6Q96NY7 704 aa9.06□□□□□ -0.96
SPTLC3-201ENST00000399002 MMS19Q96T76 1030 aa9.06□□□□□ -0.96
SPTLC3-201ENST00000399002 TSPYL2Q9H2G4 693 aaPredicted RBP9.06□□□□□ -0.96
SPTLC3-201ENST00000399002 PCDHA1Q9Y5I3 950 aa9.06□□□□□ -0.96
SPTLC3-201ENST00000399002 SPHKAPQ2M3C7 1700 aa9.06□□□□□ -0.96
SPTLC3-201ENST00000399002 BBOX1O75936 387 aa9.06□□□□□ -0.96
SPTLC3-201ENST00000399002 JAK3P52333 1124 aa9.06□□□□□ -0.96
SPTLC3-201ENST00000399002 TCP11X2Q5H9J9 407 aa9.06□□□□□ -0.96
SPTLC3-201ENST00000399002 SYDE2Q5VT97 1194 aa9.06□□□□□ -0.96
SPTLC3-201ENST00000399002 JADE1Q6IE81 842 aa9.06□□□□□ -0.96
SPTLC3-201ENST00000399002 CFAP61Q8NHU2 1237 aa9.06□□□□□ -0.96
SPTLC3-201ENST00000399002 TRIM4Q9C037 500 aa9.06□□□□□ -0.96
SPTLC3-201ENST00000399002 SEPT10Q9P0V9 454 aa9.06□□□□□ -0.96
SPTLC3-201ENST00000399002 SETBP1Q9Y6X0 1596 aa9.06□□□□□ -0.96
SPTLC3-201ENST00000399002 TMEM232C9JQI7 657 aa9.05□□□□□ -0.96
SPTLC3-201ENST00000399002 KRT1P04264 644 aa9.05□□□□□ -0.96
SPTLC3-201ENST00000399002 GSTA1P08263 222 aa9.05□□□□□ -0.96
SPTLC3-201ENST00000399002 GSTA2P09210 222 aa9.05□□□□□ -0.96
SPTLC3-201ENST00000399002 IFRD2Q12894 506 aaPredicted RBP9.05□□□□□ -0.96
SPTLC3-201ENST00000399002 ARHGEF6Q15052 776 aa9.05□□□□□ -0.96
SPTLC3-201ENST00000399002 PDCD2Q16342 344 aaPredicted RBP9.05□□□□□ -0.96
SPTLC3-201ENST00000399002 LRRC47Q8N1G4 583 aaKnown RBP9.05□□□□□ -0.96
SPTLC3-201ENST00000399002 NLGN1Q8N2Q7 840 aa9.05□□□□□ -0.96
SPTLC3-201ENST00000399002 KIAA1586Q9HCI6 787 aa9.05□□□□□ -0.96
SPTLC3-201ENST00000399002 PACSIN2Q9UNF0 486 aaPredicted RBP9.05□□□□□ -0.96
SPTLC3-201ENST00000399002 TTC36A6NLP5 189 aa9.05□□□□□ -0.96
SPTLC3-201ENST00000399002 HEXIM1O94992 359 aaKnown RBP9.05□□□□□ -0.96
SPTLC3-201ENST00000399002 ADD1P35611 737 aaKnown RBP9.05□□□□□ -0.96
SPTLC3-201ENST00000399002 YWHAGP61981 247 aaKnown RBP eCLIP9.05□□□□□ -0.96
SPTLC3-201ENST00000399002 GIMAP8Q8ND71 665 aaPredicted RBP9.05□□□□□ -0.96
SPTLC3-201ENST00000399002 DHX38Q92620 1227 aaKnown RBP9.05□□□□□ -0.96
SPTLC3-201ENST00000399002 MAGOHBQ96A72 148 aaKnown RBP9.05□□□□□ -0.96
SPTLC3-201ENST00000399002 ST7Q9NRC1 585 aa9.05□□□□□ -0.96
SPTLC3-201ENST00000399002 SPTLC3Q9NUV7 552 aa9.05□□□□□ -0.96
SPTLC3-201ENST00000399002 USP21Q9UK80 565 aa9.05□□□□□ -0.96
SPTLC3-201ENST00000399002 HEG1Q9ULI3 1381 aa9.05□□□□□ -0.96
SPTLC3-201ENST00000399002 PNMA6FA0A0J9YX94 578 aa9.05□□□□□ -0.96
SPTLC3-201ENST00000399002 ANO9A1A5B4 782 aa9.05□□□□□ -0.96
SPTLC3-201ENST00000399002 ZBTB17Q13105 803 aa9.05□□□□□ -0.96
SPTLC3-201ENST00000399002 ZNF449Q6P9G9 518 aa9.05□□□□□ -0.96
SPTLC3-201ENST00000399002 PAGE5Q96GU1 130 aa9.05□□□□□ -0.96
SPTLC3-201ENST00000399002 TTC25Q96NG3 672 aa9.05□□□□□ -0.96
SPTLC3-201ENST00000399002 DONSONQ9NYP3 566 aa9.05□□□□□ -0.96
SPTLC3-201ENST00000399002 MIF4GDA9UHW6 222 aaKnown RBP9.05□□□□□ -0.96
SPTLC3-201ENST00000399002 FOXP2O15409 715 aa9.05□□□□□ -0.96
SPTLC3-201ENST00000399002 DCTN3O75935 186 aa9.05□□□□□ -0.96
SPTLC3-201ENST00000399002 ACTN1P12814 892 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms