RNA–Protein interactions for RNA: ENST00000398559.6

TMF1-201, Transcript of TATA element modulatory factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMF1, Length 6,849 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMF1-201ENST00000398559 AP1M1Q9BXS5 423 aa12.78□□□□□ -0.36
TMF1-201ENST00000398559 SUDS3Q9H7L9 328 aaPredicted RBP12.78□□□□□ -0.36
TMF1-201ENST00000398559 PCDHA1Q9Y5I3 950 aa12.78□□□□□ -0.36
TMF1-201ENST00000398559 KIF23Q02241 960 aaPredicted RBP12.78□□□□□ -0.36
TMF1-201ENST00000398559 ICA1Q05084 483 aa12.78□□□□□ -0.36
TMF1-201ENST00000398559 UBE3CQ15386 1083 aa12.78□□□□□ -0.36
TMF1-201ENST00000398559 RSBN1LQ6PCB5 846 aaPredicted RBP12.78□□□□□ -0.36
TMF1-201ENST00000398559 ARMC9Q7Z3E5 817 aa12.78□□□□□ -0.36
TMF1-201ENST00000398559 AK8Q96MA6 479 aa12.78□□□□□ -0.36
TMF1-201ENST00000398559 RNF26Q9BY78 433 aaPredicted RBP12.78□□□□□ -0.36
TMF1-201ENST00000398559 AS3MTQ9HBK9 375 aa12.78□□□□□ -0.36
TMF1-201ENST00000398559 TCP10L2B9ZVM9 353 aa12.78□□□□□ -0.36
TMF1-201ENST00000398559 TMEM232C9JQI7 657 aa12.78□□□□□ -0.36
TMF1-201ENST00000398559 PHKA1P46020 1223 aa12.78□□□□□ -0.36
TMF1-201ENST00000398559 SLFN13Q68D06 897 aa12.78□□□□□ -0.36
TMF1-201ENST00000398559 STK17AQ9UEE5 414 aa12.78□□□□□ -0.36
TMF1-201ENST00000398559 ABCC10Q5T3U5 1492 aa12.78□□□□□ -0.36
TMF1-201ENST00000398559 MYOM2P54296 1465 aa12.78□□□□□ -0.36
TMF1-201ENST00000398559 NDUFA10O95299 355 aa12.78□□□□□ -0.36
TMF1-201ENST00000398559 MT-ND3P03897 115 aa12.78□□□□□ -0.36
TMF1-201ENST00000398559 ESRRGP62508 458 aa12.78□□□□□ -0.36
TMF1-201ENST00000398559 E2F4Q16254 413 aa12.78□□□□□ -0.36
TMF1-201ENST00000398559 PIP4K2CQ8TBX8 421 aa12.78□□□□□ -0.36
TMF1-201ENST00000398559 GCNT4Q9P109 453 aa12.78□□□□□ -0.36
TMF1-201ENST00000398559 SEPT9Q9UHD8 586 aaPredicted RBP12.78□□□□□ -0.36
TMF1-201ENST00000398559 ALDH1B1P30837 517 aa12.78□□□□□ -0.36
TMF1-201ENST00000398559 TMTC4Q5T4D3 741 aa12.78□□□□□ -0.36
TMF1-201ENST00000398559 CFAP36Q96G28 342 aa12.78□□□□□ -0.36
TMF1-201ENST00000398559 PGBD1Q96JS3 809 aa12.78□□□□□ -0.36
TMF1-201ENST00000398559 PCIF1Q9H4Z3 704 aa12.78□□□□□ -0.36
TMF1-201ENST00000398559 HNRNPDLO14979 420 aaKnown RBP12.77□□□□□ -0.36
TMF1-201ENST00000398559 SERPING1P05155 500 aa12.77□□□□□ -0.36
TMF1-201ENST00000398559 PCP11498 1178 aaKnown RBP12.77□□□□□ -0.36
TMF1-201ENST00000398559 PDCD2Q16342 344 aaPredicted RBP12.77□□□□□ -0.36
TMF1-201ENST00000398559 NIM1KQ8IY84 436 aa12.77□□□□□ -0.36
TMF1-201ENST00000398559 RNF14Q9UBS8 474 aa12.77□□□□□ -0.36
TMF1-201ENST00000398559 ORC6Q9Y5N6 252 aa12.77□□□□□ -0.36
TMF1-201ENST00000398559 ERVV-2B6SEH9 535 aa12.77□□□□□ -0.36
TMF1-201ENST00000398559 MCF2LO15068 1137 aa12.77□□□□□ -0.36
TMF1-201ENST00000398559 PPIP5K2O43314 1243 aa12.77□□□□□ -0.36
TMF1-201ENST00000398559 MMP1P03956 469 aa12.77□□□□□ -0.36
TMF1-201ENST00000398559 ZNF449Q6P9G9 518 aa12.77□□□□□ -0.36
TMF1-201ENST00000398559 DRC3Q9H069 523 aa12.77□□□□□ -0.36
TMF1-201ENST00000398559 THAP9Q9H5L6 903 aa12.77□□□□□ -0.36
TMF1-201ENST00000398559 GYS2P54840 703 aa12.77□□□□□ -0.37
TMF1-201ENST00000398559 BASP1P80723 227 aaKnown RBP12.77□□□□□ -0.37
TMF1-201ENST00000398559 HIBCHQ6NVY1 386 aaPredicted RBP12.77□□□□□ -0.37
TMF1-201ENST00000398559 PANX2Q96RD6 677 aa12.77□□□□□ -0.37
TMF1-201ENST00000398559 TUBB6Q9BUF5 446 aa12.77□□□□□ -0.37
TMF1-201ENST00000398559 ZMYND12Q9H0C1 365 aa12.77□□□□□ -0.37
TMF1-201ENST00000398559 DBNLQ9UJU6 430 aaKnown RBP12.77□□□□□ -0.37
TMF1-201ENST00000398559 RASGRF2O14827 1237 aa12.77□□□□□ -0.37
TMF1-201ENST00000398559 GAP43P17677 238 aa12.77□□□□□ -0.37
TMF1-201ENST00000398559 IGBP1P78318 339 aa12.77□□□□□ -0.37
TMF1-201ENST00000398559 TMED1Q13445 227 aa12.77□□□□□ -0.37
TMF1-201ENST00000398559 SLC12A1Q13621 1099 aa12.77□□□□□ -0.37
TMF1-201ENST00000398559 SLMAPQ14BN4 828 aa12.77□□□□□ -0.37
TMF1-201ENST00000398559 ANGPTL2Q9UKU9 493 aa12.77□□□□□ -0.37
TMF1-201ENST00000398559 CCPG1Q9ULG6 757 aa12.77□□□□□ -0.37
TMF1-201ENST00000398559 PLS3P13797 630 aa12.77□□□□□ -0.37
TMF1-201ENST00000398559 UBXN2AP68543 259 aa12.77□□□□□ -0.37
TMF1-201ENST00000398559 DR1Q01658 176 aa12.77□□□□□ -0.37
TMF1-201ENST00000398559 LARP7Q4G0J3 582 aaKnown RBP eCLIP12.77□□□□□ -0.37
TMF1-201ENST00000398559 PUS3Q9BZE2 481 aaKnown RBP12.77□□□□□ -0.37
TMF1-201ENST00000398559 GREM2Q9H772 168 aa12.77□□□□□ -0.37
TMF1-201ENST00000398559 UBE2TQ9NPD8 197 aaPredicted RBP12.77□□□□□ -0.37
TMF1-201ENST00000398559 SLFN14P0C7P3 912 aa12.76□□□□□ -0.37
TMF1-201ENST00000398559 SRGAP2BP0DMP2 458 aa12.76□□□□□ -0.37
TMF1-201ENST00000398559 CUL4AQ13619 759 aa12.76□□□□□ -0.37
TMF1-201ENST00000398559 DARS2Q6PI48 645 aaKnown RBP12.76□□□□□ -0.37
TMF1-201ENST00000398559 ENOX1Q8TC92 643 aaKnown RBP12.76□□□□□ -0.37
TMF1-201ENST00000398559 CCDC138Q96M89 665 aa12.76□□□□□ -0.37
TMF1-201ENST00000398559 FMO2Q99518 471 aa12.76□□□□□ -0.37
TMF1-201ENST00000398559 RCOR1Q9UKL0 485 aa12.76□□□□□ -0.37
TMF1-201ENST00000398559 ANGPTL3Q9Y5C1 460 aa12.76□□□□□ -0.37
TMF1-201ENST00000398559 HNRNPH2P55795 449 aaKnown RBP12.76□□□□□ -0.37
TMF1-201ENST00000398559 TSTA3Q13630 321 aaPredicted RBP12.76□□□□□ -0.37
TMF1-201ENST00000398559 ZNF577Q9BSK1 485 aa12.76□□□□□ -0.37
TMF1-201ENST00000398559 STK32BQ9NY57 414 aa12.76□□□□□ -0.37
TMF1-201ENST00000398559 EXOC1LA0A1B0GW35 172 aa12.76□□□□□ -0.37
TMF1-201ENST00000398559 PALM3A6NDB9 673 aaPredicted RBP12.76□□□□□ -0.37
TMF1-201ENST00000398559 GOLGA8SH3BPF8 625 aa12.76□□□□□ -0.37
TMF1-201ENST00000398559 TLR3O15455 904 aaKnown RBP12.76□□□□□ -0.37
TMF1-201ENST00000398559 PNMA6AP0CW24 399 aaPredicted RBP12.76□□□□□ -0.37
TMF1-201ENST00000398559 NR5A1Q13285 461 aa12.76□□□□□ -0.37
TMF1-201ENST00000398559 KIF22Q14807 665 aa12.76□□□□□ -0.37
TMF1-201ENST00000398559 NEK9Q8TD19 979 aa12.76□□□□□ -0.37
TMF1-201ENST00000398559 ACCSQ96QU6 501 aa12.76□□□□□ -0.37
TMF1-201ENST00000398559 WDR62O43379 1518 aa12.76□□□□□ -0.37
TMF1-201ENST00000398559 GOLGA8CPA6NN73 597 aa12.76□□□□□ -0.37
TMF1-201ENST00000398559 PCCAP05165 728 aaPredicted RBP12.76□□□□□ -0.37
TMF1-201ENST00000398559 SKIP12755 728 aa12.76□□□□□ -0.37
TMF1-201ENST00000398559 NCF2P19878 526 aaPredicted RBP12.76□□□□□ -0.37
TMF1-201ENST00000398559 DOK7Q18PE1 504 aa12.76□□□□□ -0.37
TMF1-201ENST00000398559 FAM47CQ5HY64 1035 aa12.76□□□□□ -0.37
TMF1-201ENST00000398559 HP1BP3Q5SSJ5 553 aaPredicted RBP12.76□□□□□ -0.37
TMF1-201ENST00000398559 C10orf76Q5T2E6 689 aa12.76□□□□□ -0.37
TMF1-201ENST00000398559 ANKRD36BP1Q96IX9 119 aa12.76□□□□□ -0.37
TMF1-201ENST00000398559 PDE6BP35913 854 aa12.76□□□□□ -0.37
TMF1-201ENST00000398559 ZBTB17Q13105 803 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms