RNA–Protein interactions for RNA: ENST00000396551.7

TRIM39-205, Transcript of tripartite motif containing 39, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TRIM39, Length 3,249 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-205ENST00000396551 USH1GQ495M9 461 aa18.41■□□□□ 0.54
TRIM39-205ENST00000396551 SYDE2Q5VT97 1194 aa18.41■□□□□ 0.54
TRIM39-205ENST00000396551 ETNPPLQ8TBG4 499 aa18.41■□□□□ 0.54
TRIM39-205ENST00000396551 ARGLU1Q9NWB6 273 aaPredicted RBP18.41■□□□□ 0.54
TRIM39-205ENST00000396551 RGPD3A6NKT7 1758 aaPredicted RBP18.41■□□□□ 0.54
TRIM39-205ENST00000396551 RGPD4Q7Z3J3 1758 aa18.41■□□□□ 0.54
TRIM39-205ENST00000396551 ABCB11O95342 1321 aa18.41■□□□□ 0.54
TRIM39-205ENST00000396551 NPHP3-ACAD11A0A0J9YXS1 232 aa18.41■□□□□ 0.54
TRIM39-205ENST00000396551 SSBP05455 408 aaKnown RBP eCLIP18.41■□□□□ 0.54
TRIM39-205ENST00000396551 CHMP4BP1P59074 171 aa18.41■□□□□ 0.54
TRIM39-205ENST00000396551 SPIRE1Q08AE8 756 aa18.41■□□□□ 0.54
TRIM39-205ENST00000396551 MAN2A1Q16706 1144 aa18.41■□□□□ 0.54
TRIM39-205ENST00000396551 MOXD1Q6UVY6 613 aa18.41■□□□□ 0.54
TRIM39-205ENST00000396551 FBXO11Q86XK2 927 aa18.41■□□□□ 0.54
TRIM39-205ENST00000396551 NHEJ1Q9H9Q4 299 aaPredicted RBP18.41■□□□□ 0.54
TRIM39-205ENST00000396551 OPLAHO14841 1288 aa18.4■□□□□ 0.54
TRIM39-205ENST00000396551 PLA2G4BP0C869 781 aa18.4■□□□□ 0.54
TRIM39-205ENST00000396551 PNMA6AP0CW24 399 aaPredicted RBP18.4■□□□□ 0.54
TRIM39-205ENST00000396551 AMPD2Q01433 879 aa18.4■□□□□ 0.54
TRIM39-205ENST00000396551 MYOCDQ8IZQ8 938 aa18.4■□□□□ 0.54
TRIM39-205ENST00000396551 PARD6BQ9BYG5 372 aa18.4■□□□□ 0.54
TRIM39-205ENST00000396551 HAUS4Q9H6D7 363 aa18.4■□□□□ 0.54
TRIM39-205ENST00000396551 PCDHA2Q9Y5H9 948 aa18.4■□□□□ 0.54
TRIM39-205ENST00000396551 COL2A1P02458 1487 aaPredicted RBP18.4■□□□□ 0.54
TRIM39-205ENST00000396551 RCCD1A6NED2 376 aa18.4■□□□□ 0.54
TRIM39-205ENST00000396551 MMP14P50281 582 aa18.4■□□□□ 0.54
TRIM39-205ENST00000396551 BMS1Q14692 1282 aaKnown RBP18.4■□□□□ 0.54
TRIM39-205ENST00000396551 FAM26FQ5R3K3 315 aa18.4■□□□□ 0.54
TRIM39-205ENST00000396551 TMCO3Q6UWJ1 677 aa18.4■□□□□ 0.54
TRIM39-205ENST00000396551 LENG9Q96B70 501 aa18.4■□□□□ 0.54
TRIM39-205ENST00000396551 BMP3P12645 472 aa18.4■□□□□ 0.54
TRIM39-205ENST00000396551 ERCC3P19447 782 aa18.4■□□□□ 0.54
TRIM39-205ENST00000396551 HOXA7P31268 230 aaPredicted RBP18.4■□□□□ 0.54
TRIM39-205ENST00000396551 CACNB1Q02641 598 aaPredicted RBP18.4■□□□□ 0.54
TRIM39-205ENST00000396551 TUBB2AQ13885 445 aa18.4■□□□□ 0.54
TRIM39-205ENST00000396551 RBM26Q5T8P6 1007 aaKnown RBP18.4■□□□□ 0.54
TRIM39-205ENST00000396551 ZNF772Q68DY9 489 aaPredicted RBP18.4■□□□□ 0.54
TRIM39-205ENST00000396551 FOXR2Q6PJQ5 311 aa18.4■□□□□ 0.54
TRIM39-205ENST00000396551 CEP112Q8N8E3 955 aa18.4■□□□□ 0.54
TRIM39-205ENST00000396551 CSRNP1Q96S65 589 aa18.4■□□□□ 0.54
TRIM39-205ENST00000396551 TUBB2BQ9BVA1 445 aa18.4■□□□□ 0.54
TRIM39-205ENST00000396551 TBC1D7Q9P0N9 293 aa18.4■□□□□ 0.54
TRIM39-205ENST00000396551 PPIP5K2O43314 1243 aa18.39■□□□□ 0.53
TRIM39-205ENST00000396551 CYP11B2P19099 503 aa18.39■□□□□ 0.53
TRIM39-205ENST00000396551 IKQ13123 557 aaPredicted RBP18.39■□□□□ 0.53
TRIM39-205ENST00000396551 PRR16Q569H4 304 aa18.39■□□□□ 0.53
TRIM39-205ENST00000396551 BTNL9Q6UXG8 535 aa18.39■□□□□ 0.53
TRIM39-205ENST00000396551 ZNF662Q6ZS27 426 aa18.39■□□□□ 0.53
TRIM39-205ENST00000396551 GPBP1Q86WP2 473 aa18.39■□□□□ 0.53
TRIM39-205ENST00000396551 ZNHIT6Q9NWK9 470 aaKnown RBP18.39■□□□□ 0.53
TRIM39-205ENST00000396551 EIF3CLB5ME19 914 aaKnown RBP18.38■□□□□ 0.53
TRIM39-205ENST00000396551 FGFR1OPO95684 399 aaKnown RBP18.38■□□□□ 0.53
TRIM39-205ENST00000396551 CYLC1P35663 651 aaPredicted RBP18.38■□□□□ 0.53
TRIM39-205ENST00000396551 CC2D2BQ6DHV5 1058 aa18.38■□□□□ 0.53
TRIM39-205ENST00000396551 SLFN12Q8IYM2 578 aa18.38■□□□□ 0.53
TRIM39-205ENST00000396551 CCDC170Q8IYT3 715 aa18.38■□□□□ 0.53
TRIM39-205ENST00000396551 EIF3CQ99613 913 aaKnown RBP18.38■□□□□ 0.53
TRIM39-205ENST00000396551 TSG101Q99816 390 aa18.38■□□□□ 0.53
TRIM39-205ENST00000396551 LACRTQ9GZZ8 138 aa18.38■□□□□ 0.53
TRIM39-205ENST00000396551 POTEFA5A3E0 1075 aa18.38■□□□□ 0.53
TRIM39-205ENST00000396551 FAM86B1E9PN63 330 aa18.38■□□□□ 0.53
TRIM39-205ENST00000396551 PLEKP08567 350 aaPredicted RBP18.38■□□□□ 0.53
TRIM39-205ENST00000396551 FAM86B2P0C5J1 330 aa18.38■□□□□ 0.53
TRIM39-205ENST00000396551 POTEIP0CG38 1075 aa18.38■□□□□ 0.53
TRIM39-205ENST00000396551 KRT83P78385 493 aa18.38■□□□□ 0.53
TRIM39-205ENST00000396551 CDK17Q00537 523 aa18.38■□□□□ 0.53
TRIM39-205ENST00000396551 Q4G0T1 1027 aa18.38■□□□□ 0.53
TRIM39-205ENST00000396551 ARSHQ5FYA8 562 aa18.38■□□□□ 0.53
TRIM39-205ENST00000396551 KIAA1755Q5JYT7 1200 aa18.38■□□□□ 0.53
TRIM39-205ENST00000396551 CCDC122Q5T0U0 273 aa18.38■□□□□ 0.53
TRIM39-205ENST00000396551 CC2D1AQ6P1N0 951 aaPredicted RBP18.38■□□□□ 0.53
TRIM39-205ENST00000396551 POTEGQ6S5H5 508 aa18.38■□□□□ 0.53
TRIM39-205ENST00000396551 POTEEQ6S8J3 1075 aa18.38■□□□□ 0.53
TRIM39-205ENST00000396551 FAM207AQ9NSI2 230 aaPredicted RBP18.38■□□□□ 0.53
TRIM39-205ENST00000396551 ZNF263O14978 683 aa18.38■□□□□ 0.53
TRIM39-205ENST00000396551 HNRNPH3P31942 346 aaKnown RBP18.38■□□□□ 0.53
TRIM39-205ENST00000396551 SREBF1P36956 1147 aa18.38■□□□□ 0.53
TRIM39-205ENST00000396551 SLC12A3P55017 1021 aa18.38■□□□□ 0.53
TRIM39-205ENST00000396551 SPICE1Q8N0Z3 855 aa18.38■□□□□ 0.53
TRIM39-205ENST00000396551 ANKZF1Q9H8Y5 726 aa18.38■□□□□ 0.53
TRIM39-205ENST00000396551 PSMD14O00487 310 aa18.37■□□□□ 0.53
TRIM39-205ENST00000396551 SLC26A4O43511 780 aa18.37■□□□□ 0.53
TRIM39-205ENST00000396551 C21orf2O43822 256 aa18.37■□□□□ 0.53
TRIM39-205ENST00000396551 ECE1P42892 770 aa18.37■□□□□ 0.53
TRIM39-205ENST00000396551 RAD51AP2Q09MP3 1159 aa18.37■□□□□ 0.53
TRIM39-205ENST00000396551 CATSPER3Q86XQ3 398 aa18.37■□□□□ 0.53
TRIM39-205ENST00000396551 CCDC155Q8N6L0 562 aa18.37■□□□□ 0.53
TRIM39-205ENST00000396551 JAKMIP2Q96AA8 810 aa18.37■□□□□ 0.53
TRIM39-205ENST00000396551 ST7Q9NRC1 585 aa18.37■□□□□ 0.53
TRIM39-205ENST00000396551 PLAGL2Q9UPG8 496 aa18.37■□□□□ 0.53
TRIM39-205ENST00000396551 PLA2G4AP47712 749 aa18.37■□□□□ 0.53
TRIM39-205ENST00000396551 BMP2KQ9NSY1 1161 aaPredicted RBP18.37■□□□□ 0.53
TRIM39-205ENST00000396551 PRR12Q9ULL5 1215 aa18.37■□□□□ 0.53
TRIM39-205ENST00000396551 MYO6Q9UM54 1294 aa18.37■□□□□ 0.53
TRIM39-205ENST00000396551 TCP10L2B9ZVM9 353 aa18.36■□□□□ 0.53
TRIM39-205ENST00000396551 HOXA13P31271 388 aaPredicted RBP18.36■□□□□ 0.53
TRIM39-205ENST00000396551 PSMC6P62333 389 aa18.36■□□□□ 0.53
TRIM39-205ENST00000396551 CYP27A1Q02318 531 aa18.36■□□□□ 0.53
TRIM39-205ENST00000396551 KIAA1328Q86T90 577 aa18.36■□□□□ 0.53
TRIM39-205ENST00000396551 CCDC65Q8IXS2 484 aa18.36■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms