RNA–Protein interactions for RNA: ENST00000395898.3

VPS13C-204, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13C, Length 11,012 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-204ENST00000395898 LDHAP00338 332 aaKnown RBP5.92□□□□□ -1.46
VPS13C-204ENST00000395898 STMN1P16949 149 aa5.92□□□□□ -1.46
VPS13C-204ENST00000395898 ARHGAP27Q6ZUM4 889 aa5.92□□□□□ -1.46
VPS13C-204ENST00000395898 GNL3Q9BVP2 549 aaKnown RBP eCLIP5.92□□□□□ -1.46
VPS13C-204ENST00000395898 SH3GLB2Q9NR46 395 aa5.92□□□□□ -1.46
VPS13C-204ENST00000395898 HEG1Q9ULI3 1381 aa5.92□□□□□ -1.46
VPS13C-204ENST00000395898 ATP8B3O60423 1300 aa5.92□□□□□ -1.46
VPS13C-204ENST00000395898 SERPING1P05155 500 aa5.92□□□□□ -1.46
VPS13C-204ENST00000395898 CIITAP33076 1130 aa5.92□□□□□ -1.46
VPS13C-204ENST00000395898 CCDC93Q567U6 631 aa5.92□□□□□ -1.46
VPS13C-204ENST00000395898 ARMCX2Q7L311 632 aa5.92□□□□□ -1.46
VPS13C-204ENST00000395898 TBCKQ8TEA7 893 aa5.92□□□□□ -1.46
VPS13C-204ENST00000395898 DDX17Q92841 729 aaKnown RBP5.92□□□□□ -1.46
VPS13C-204ENST00000395898 INTS9Q9NV88 658 aaKnown RBP5.92□□□□□ -1.46
VPS13C-204ENST00000395898 CDC23Q9UJX2 597 aa5.92□□□□□ -1.46
VPS13C-204ENST00000395898 IGSF1Q8N6C5 1336 aa5.92□□□□□ -1.46
VPS13C-204ENST00000395898 H7C0C1 242 aa5.92□□□□□ -1.46
VPS13C-204ENST00000395898 TTC4O95801 387 aa5.92□□□□□ -1.46
VPS13C-204ENST00000395898 PPARGP37231 505 aaPredicted RBP5.92□□□□□ -1.46
VPS13C-204ENST00000395898 ATP5OP48047 213 aa5.92□□□□□ -1.46
VPS13C-204ENST00000395898 EPHB4P54760 987 aa5.92□□□□□ -1.46
VPS13C-204ENST00000395898 GUCY2DQ02846 1103 aa5.92□□□□□ -1.46
VPS13C-204ENST00000395898 CYP4A11Q02928 519 aa5.92□□□□□ -1.46
VPS13C-204ENST00000395898 PPP1R13BQ96KQ4 1090 aa5.92□□□□□ -1.46
VPS13C-204ENST00000395898 LCMT1Q9UIC8 334 aa5.92□□□□□ -1.46
VPS13C-204ENST00000395898 INO80B-WBP1J3KQ70 363 aa5.92□□□□□ -1.46
VPS13C-204ENST00000395898 NLRP10Q86W26 655 aa5.92□□□□□ -1.46
VPS13C-204ENST00000395898 GPT2Q8TD30 523 aa5.92□□□□□ -1.46
VPS13C-204ENST00000395898 CLIC6Q96NY7 704 aa5.92□□□□□ -1.46
VPS13C-204ENST00000395898 TUBB6Q9BUF5 446 aa5.92□□□□□ -1.46
VPS13C-204ENST00000395898 INO80BQ9C086 356 aaPredicted RBP5.92□□□□□ -1.46
VPS13C-204ENST00000395898 GCNT4Q9P109 453 aa5.92□□□□□ -1.46
VPS13C-204ENST00000395898 DAAM1Q9Y4D1 1078 aa5.92□□□□□ -1.46
VPS13C-204ENST00000395898 CEP152O94986 1710 aa5.92□□□□□ -1.46
VPS13C-204ENST00000395898 ITSN1Q15811 1721 aa5.92□□□□□ -1.46
VPS13C-204ENST00000395898 PODXLO00592 558 aa5.92□□□□□ -1.46
VPS13C-204ENST00000395898 IFNAR1P17181 557 aa5.92□□□□□ -1.46
VPS13C-204ENST00000395898 LIFRP42702 1097 aa5.92□□□□□ -1.46
VPS13C-204ENST00000395898 SLFN12LQ6IEE8 588 aa5.92□□□□□ -1.46
VPS13C-204ENST00000395898 SKA2Q8WVK7 121 aaPredicted RBP5.92□□□□□ -1.46
VPS13C-204ENST00000395898 CEP170P1Q96L14 293 aa5.92□□□□□ -1.46
VPS13C-204ENST00000395898 BCL2L12Q9HB09 334 aa5.92□□□□□ -1.46
VPS13C-204ENST00000395898 PNMA3Q9UL41 463 aa5.92□□□□□ -1.46
VPS13C-204ENST00000395898 USP17L3A6NCW0 530 aa5.91□□□□□ -1.46
VPS13C-204ENST00000395898 USP17L4A6NCW7 530 aa5.91□□□□□ -1.46
VPS13C-204ENST00000395898 IPO5O00410 1097 aaKnown RBP5.91□□□□□ -1.46
VPS13C-204ENST00000395898 NFKBIAP25963 317 aa5.91□□□□□ -1.46
VPS13C-204ENST00000395898 CLNS1AP54105 237 aaKnown RBP5.91□□□□□ -1.46
VPS13C-204ENST00000395898 MESDQ14696 234 aa5.91□□□□□ -1.46
VPS13C-204ENST00000395898 SGO2Q562F6 1265 aa5.91□□□□□ -1.46
VPS13C-204ENST00000395898 USPL1Q5W0Q7 1092 aa5.91□□□□□ -1.46
VPS13C-204ENST00000395898 CLEC4GQ6UXB4 293 aa5.91□□□□□ -1.46
VPS13C-204ENST00000395898 USP17L1Q7RTZ2 530 aa5.91□□□□□ -1.46
VPS13C-204ENST00000395898 FAM160B2Q86V87 743 aa5.91□□□□□ -1.46
VPS13C-204ENST00000395898 ARHGEF25Q86VW2 580 aa5.91□□□□□ -1.46
VPS13C-204ENST00000395898 SNX25Q9H3E2 840 aa5.91□□□□□ -1.46
VPS13C-204ENST00000395898 FAM8A1Q9UBU6 413 aa5.91□□□□□ -1.46
VPS13C-204ENST00000395898 SLC8A2Q9UPR5 921 aa5.91□□□□□ -1.46
VPS13C-204ENST00000395898 ADGRL3Q9HAR2 1447 aa5.91□□□□□ -1.46
VPS13C-204ENST00000395898 ARAP3Q8WWN8 1544 aa5.91□□□□□ -1.46
VPS13C-204ENST00000395898 S100BP04271 92 aaPredicted RBP5.91□□□□□ -1.46
VPS13C-204ENST00000395898 CYP21A2P08686 494 aa5.91□□□□□ -1.46
VPS13C-204ENST00000395898 EIF3BP55884 814 aaKnown RBP5.91□□□□□ -1.46
VPS13C-204ENST00000395898 SRRM1Q8IYB3 904 aaKnown RBP5.91□□□□□ -1.46
VPS13C-204ENST00000395898 LRGUKQ96M69 825 aa5.91□□□□□ -1.46
VPS13C-204ENST00000395898 DESI2Q9BSY9 194 aa5.91□□□□□ -1.46
VPS13C-204ENST00000395898 SEMA3FQ13275 785 aa5.91□□□□□ -1.46
VPS13C-204ENST00000395898 TTC25Q96NG3 672 aa5.91□□□□□ -1.46
VPS13C-204ENST00000395898 THAP9Q9H5L6 903 aa5.91□□□□□ -1.46
VPS13C-204ENST00000395898 ZSWIM5Q9P217 1185 aa5.91□□□□□ -1.46
VPS13C-204ENST00000395898 THEGQ9P2T0 379 aa5.91□□□□□ -1.46
VPS13C-204ENST00000395898 RIPOR2Q9Y4F9 1068 aa5.91□□□□□ -1.46
VPS13C-204ENST00000395898 SPATA31E1Q6ZUB1 1445 aa5.91□□□□□ -1.46
VPS13C-204ENST00000395898 PGRMC1O00264 195 aaKnown RBP5.91□□□□□ -1.46
VPS13C-204ENST00000395898 PRPF3O43395 683 aaKnown RBP5.91□□□□□ -1.46
VPS13C-204ENST00000395898 CASP14P31944 242 aa5.91□□□□□ -1.46
VPS13C-204ENST00000395898 EHHADHQ08426 723 aa5.91□□□□□ -1.46
VPS13C-204ENST00000395898 ASNSP08243 561 aa5.91□□□□□ -1.46
VPS13C-204ENST00000395898 VPS41P49754 854 aa5.91□□□□□ -1.46
VPS13C-204ENST00000395898 RSRC2Q7L4I2 434 aaKnown RBP5.91□□□□□ -1.46
VPS13C-204ENST00000395898 TRMT2AQ8IZ69 625 aaKnown RBP5.91□□□□□ -1.46
VPS13C-204ENST00000395898 PCDHA5Q9Y5H7 936 aa5.91□□□□□ -1.46
VPS13C-204ENST00000395898 GLI2P10070 1586 aa5.91□□□□□ -1.46
VPS13C-204ENST00000395898 K7ERI5 159 aa5.91□□□□□ -1.46
VPS13C-204ENST00000395898 SLFN14P0C7P3 912 aa5.91□□□□□ -1.46
VPS13C-204ENST00000395898 ARL4AP40617 200 aa5.91□□□□□ -1.46
VPS13C-204ENST00000395898 KCTD6Q8NC69 237 aa5.91□□□□□ -1.46
VPS13C-204ENST00000395898 FMO2Q99518 471 aa5.91□□□□□ -1.46
VPS13C-204ENST00000395898 DIS3Q9Y2L1 958 aaKnown RBP5.91□□□□□ -1.46
VPS13C-204ENST00000395898 GNGT1P63211 74 aa5.91□□□□□ -1.46
VPS13C-204ENST00000395898 IGBP1P78318 339 aa5.91□□□□□ -1.46
VPS13C-204ENST00000395898 PDE1BQ01064 536 aa5.91□□□□□ -1.46
VPS13C-204ENST00000395898 IFRD2Q12894 506 aaPredicted RBP5.91□□□□□ -1.46
VPS13C-204ENST00000395898 DIXDC1Q155Q3 683 aa5.91□□□□□ -1.46
VPS13C-204ENST00000395898 TMTC3Q6ZXV5 915 aa5.91□□□□□ -1.46
VPS13C-204ENST00000395898 RTKN2Q8IZC4 609 aa5.91□□□□□ -1.46
VPS13C-204ENST00000395898 TBRG4Q969Z0 631 aaKnown RBP eCLIP5.91□□□□□ -1.464e-6■■■■■ 41.2
VPS13C-204ENST00000395898 PALD1Q9ULE6 856 aa5.91□□□□□ -1.46
VPS13C-204ENST00000395898 ORC6Q9Y5N6 252 aa5.91□□□□□ -1.46
VPS13C-204ENST00000395898 RNF17Q9BXT8 1623 aaKnown RBP5.91□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms