RNA–Protein interactions for RNA: ENST00000394331.3

HOXC6-202, Transcript of homeobox C6, humanhuman

TSL 1 (best) BASIC

Gene HOXC6, Length 2,943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6-202ENST00000394331 TSKSQ9UJT2 592 aa20.76■□□□□ 0.91
HOXC6-202ENST00000394331 SLC12A4Q9UP95 1085 aa20.76■□□□□ 0.91
HOXC6-202ENST00000394331 hCG_1642624A0A1W2PR95 340 aa20.75■□□□□ 0.91
HOXC6-202ENST00000394331 ANP32DO95626 131 aa20.75■□□□□ 0.91
HOXC6-202ENST00000394331 HIBADHP31937 336 aaKnown RBP20.75■□□□□ 0.91
HOXC6-202ENST00000394331 QPCTQ16769 361 aa20.75■□□□□ 0.91
HOXC6-202ENST00000394331 ZC3H12AQ5D1E8 599 aaKnown RBP20.75■□□□□ 0.91
HOXC6-202ENST00000394331 TTC38Q5R3I4 469 aa20.75■□□□□ 0.91
HOXC6-202ENST00000394331 SMYD4Q8IYR2 804 aaPredicted RBP20.75■□□□□ 0.91
HOXC6-202ENST00000394331 TNFRSF25Q93038 417 aa20.75■□□□□ 0.91
HOXC6-202ENST00000394331 EPSTI1Q96J88 318 aa20.75■□□□□ 0.91
HOXC6-202ENST00000394331 NRAPQ86VF7 1730 aa20.75■□□□□ 0.91
HOXC6-202ENST00000394331 A0A087X0B3 334 aa20.75■□□□□ 0.91
HOXC6-202ENST00000394331 BLMHQ13867 455 aa20.75■□□□□ 0.91
HOXC6-202ENST00000394331 BICDL1Q6ZP65 573 aa20.75■□□□□ 0.91
HOXC6-202ENST00000394331 APLFQ8IW19 511 aaPredicted RBP20.75■□□□□ 0.91
HOXC6-202ENST00000394331 SYMPKQ92797 1274 aaKnown RBP20.75■□□□□ 0.91
HOXC6-202ENST00000394331 NLRP3Q96P20 1036 aa20.75■□□□□ 0.91
HOXC6-202ENST00000394331 ALS2CR12Q96Q35 445 aa20.75■□□□□ 0.91
HOXC6-202ENST00000394331 TAF1DQ9H5J8 278 aaPredicted RBP20.75■□□□□ 0.91
HOXC6-202ENST00000394331 DCP1AQ9NPI6 582 aaPredicted RBP20.75■□□□□ 0.91
HOXC6-202ENST00000394331 ARPP21Q9UBL0 812 aaPredicted RBP20.75■□□□□ 0.91
HOXC6-202ENST00000394331 BAIAP2L1Q9UHR4 511 aa20.75■□□□□ 0.91
HOXC6-202ENST00000394331 LUC7L3O95232 432 aaKnown RBP20.74■□□□□ 0.91
HOXC6-202ENST00000394331 AFMP43652 599 aa20.74■□□□□ 0.91
HOXC6-202ENST00000394331 TRAPPC10P48553 1259 aa20.74■□□□□ 0.91
HOXC6-202ENST00000394331 AGBL2Q5U5Z8 902 aa20.74■□□□□ 0.91
HOXC6-202ENST00000394331 MFN1Q8IWA4 741 aa20.74■□□□□ 0.91
HOXC6-202ENST00000394331 NDST4Q9H3R1 872 aa20.74■□□□□ 0.91
HOXC6-202ENST00000394331 NFU1Q9UMS0 254 aa20.74■□□□□ 0.91
HOXC6-202ENST00000394331 CNTNAP5Q8WYK1 1306 aa20.74■□□□□ 0.91
HOXC6-202ENST00000394331 CNTNAP4Q9C0A0 1308 aa20.74■□□□□ 0.91
HOXC6-202ENST00000394331 MACROD2A1Z1Q3 448 aa20.74■□□□□ 0.91
HOXC6-202ENST00000394331 NUTM2BA6NNL0 878 aaPredicted RBP20.74■□□□□ 0.91
HOXC6-202ENST00000394331 NUTM2EB1AL46 878 aaPredicted RBP20.74■□□□□ 0.91
HOXC6-202ENST00000394331 AP1G2O75843 785 aa20.74■□□□□ 0.91
HOXC6-202ENST00000394331 FAM153BP0C7A2 387 aa20.74■□□□□ 0.91
HOXC6-202ENST00000394331 CARSP49589 748 aaKnown RBP20.74■□□□□ 0.91
HOXC6-202ENST00000394331 ZBED6P86452 979 aa20.74■□□□□ 0.91
HOXC6-202ENST00000394331 ZNF268Q14587 947 aaPredicted RBP20.74■□□□□ 0.91
HOXC6-202ENST00000394331 FAM153CQ494X1 144 aa20.74■□□□□ 0.91
HOXC6-202ENST00000394331 SBK1Q52WX2 424 aa20.74■□□□□ 0.91
HOXC6-202ENST00000394331 IQCDQ96DY2 449 aa20.74■□□□□ 0.91
HOXC6-202ENST00000394331 PYM1Q9BRP8 204 aaKnown RBP20.74■□□□□ 0.91
HOXC6-202ENST00000394331 TMX4Q9H1E5 349 aaPredicted RBP20.74■□□□□ 0.91
HOXC6-202ENST00000394331 SWAP70Q9UH65 585 aa20.74■□□□□ 0.91
HOXC6-202ENST00000394331 FAM153AQ9UHL3 310 aa20.74■□□□□ 0.91
HOXC6-202ENST00000394331 GCOM1H8Y6P7 765 aaPredicted RBP20.74■□□□□ 0.91
HOXC6-202ENST00000394331 MYZAPP0CAP1 466 aa20.74■□□□□ 0.91
HOXC6-202ENST00000394331 NEFHP12036 1026 aa20.74■□□□□ 0.91
HOXC6-202ENST00000394331 HIBCHQ6NVY1 386 aaPredicted RBP20.74■□□□□ 0.91
HOXC6-202ENST00000394331 RUFY4Q6ZNE9 571 aa20.74■□□□□ 0.91
HOXC6-202ENST00000394331 DRAXINQ8NBI3 349 aaPredicted RBP20.74■□□□□ 0.91
HOXC6-202ENST00000394331 ZBTB10Q96DT7 871 aa20.74■□□□□ 0.91
HOXC6-202ENST00000394331 PSMD1Q99460 953 aa20.74■□□□□ 0.91
HOXC6-202ENST00000394331 HINFPQ9BQA5 517 aa20.74■□□□□ 0.91
HOXC6-202ENST00000394331 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP20.74■□□□□ 0.91
HOXC6-202ENST00000394331 A6NHS1 94 aa20.73■□□□□ 0.91
HOXC6-202ENST00000394331 TTC36A6NLP5 189 aa20.73■□□□□ 0.91
HOXC6-202ENST00000394331 PEX19P40855 299 aa20.73■□□□□ 0.91
HOXC6-202ENST00000394331 NT5C2P49902 561 aa20.73■□□□□ 0.91
HOXC6-202ENST00000394331 DNM2P50570 870 aa20.73■□□□□ 0.91
HOXC6-202ENST00000394331 ATP2C1P98194 919 aaPredicted RBP20.73■□□□□ 0.91
HOXC6-202ENST00000394331 ZNF174Q15697 407 aa20.73■□□□□ 0.91
HOXC6-202ENST00000394331 NPY5RQ15761 445 aa20.73■□□□□ 0.91
HOXC6-202ENST00000394331 TBC1D9BQ66K14 1250 aa20.73■□□□□ 0.91
HOXC6-202ENST00000394331 SRBD1Q8N5C6 995 aaKnown RBP20.73■□□□□ 0.91
HOXC6-202ENST00000394331 THOC1Q96FV9 657 aaKnown RBP20.73■□□□□ 0.91
HOXC6-202ENST00000394331 RBM12Q9NTZ6 932 aaKnown RBP20.73■□□□□ 0.91
HOXC6-202ENST00000394331 PLAAQ9Y263 795 aa20.73■□□□□ 0.91
HOXC6-202ENST00000394331 CCT8L1PA6NM43 557 aa20.73■□□□□ 0.91
HOXC6-202ENST00000394331 GLI1P08151 1106 aa20.73■□□□□ 0.91
HOXC6-202ENST00000394331 FIGNQ5HY92 759 aa20.73■□□□□ 0.91
HOXC6-202ENST00000394331 NELFBQ8WX92 580 aa20.73■□□□□ 0.91
HOXC6-202ENST00000394331 TBC1D31Q96DN5 1066 aa20.73■□□□□ 0.91
HOXC6-202ENST00000394331 ZNF570Q96NI8 536 aa20.73■□□□□ 0.91
HOXC6-202ENST00000394331 CAPN6Q9Y6Q1 641 aa20.73■□□□□ 0.91
HOXC6-202ENST00000394331 DUSP10Q9Y6W6 482 aa20.73■□□□□ 0.91
HOXC6-202ENST00000394331 A0A1W2PQJ5 194 aa20.72■□□□□ 0.91
HOXC6-202ENST00000394331 TRIM37O94972 964 aa20.72■□□□□ 0.91
HOXC6-202ENST00000394331 LCA5LO95447 670 aa20.72■□□□□ 0.91
HOXC6-202ENST00000394331 PARP1P09874 1014 aaKnown RBP20.72■□□□□ 0.91
HOXC6-202ENST00000394331 SCG2P13521 617 aa20.72■□□□□ 0.91
HOXC6-202ENST00000394331 CCNG1P51959 295 aa20.72■□□□□ 0.91
HOXC6-202ENST00000394331 SPA17Q15506 151 aa20.72■□□□□ 0.91
HOXC6-202ENST00000394331 CFAP221Q4G0U5 840 aa20.72■□□□□ 0.91
HOXC6-202ENST00000394331 ZNF658Q5TYW1 1059 aaPredicted RBP20.72■□□□□ 0.91
HOXC6-202ENST00000394331 RRAGBQ5VZM2 374 aa20.72■□□□□ 0.91
HOXC6-202ENST00000394331 RMND1Q9NWS8 449 aa20.72■□□□□ 0.91
HOXC6-202ENST00000394331 SLC5A4Q9NY91 659 aa20.72■□□□□ 0.91
HOXC6-202ENST00000394331 SRGNP10124 158 aa20.72■□□□□ 0.91
HOXC6-202ENST00000394331 KIF5BP33176 963 aa20.72■□□□□ 0.91
HOXC6-202ENST00000394331 NLRP5P59047 1200 aa20.72■□□□□ 0.91
HOXC6-202ENST00000394331 PPP2R2AP63151 447 aa20.72■□□□□ 0.91
HOXC6-202ENST00000394331 CCDC63Q8NA47 563 aa20.72■□□□□ 0.91
HOXC6-202ENST00000394331 CENPTQ96BT3 561 aa20.72■□□□□ 0.91
HOXC6-202ENST00000394331 SCN7AQ01118 1682 aa20.71■□□□□ 0.91
HOXC6-202ENST00000394331 GRID2IPA4D2P6 1211 aa20.71■□□□□ 0.91
HOXC6-202ENST00000394331 HEXIM1O94992 359 aaKnown RBP20.71■□□□□ 0.91
HOXC6-202ENST00000394331 DRD4P21917 467 aa20.71■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms