RNA–Protein interactions for RNA: ENST00000394299.6

GPC3-202, Transcript of glypican 3, humanhuman

TSL 1 (best) BASIC

Gene GPC3, Length 2,379 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3-202ENST00000394299 ERVK-24P63145 666 aa16.81■□□□□ 0.28
GPC3-202ENST00000394299 CYP4A11Q02928 519 aa16.81■□□□□ 0.28
GPC3-202ENST00000394299 CENPPQ6IPU0 288 aa16.81■□□□□ 0.28
GPC3-202ENST00000394299 LRRN4CLQ8ND94 238 aa16.81■□□□□ 0.28
GPC3-202ENST00000394299 AGBL1Q96MI9 1066 aa16.81■□□□□ 0.28
GPC3-202ENST00000394299 TEPSINQ96N21 525 aa16.81■□□□□ 0.28
GPC3-202ENST00000394299 ZNF215Q9UL58 517 aaPredicted RBP16.81■□□□□ 0.28
GPC3-202ENST00000394299 ITIH6Q6UXX5 1313 aa16.8■□□□□ 0.28
GPC3-202ENST00000394299 TTC26A0AVF1 554 aa16.8■□□□□ 0.28
GPC3-202ENST00000394299 LGALS16A8MUM7 142 aa16.8■□□□□ 0.28
GPC3-202ENST00000394299 EML1O00423 815 aa16.8■□□□□ 0.28
GPC3-202ENST00000394299 ABL1P00519 1130 aa16.8■□□□□ 0.28
GPC3-202ENST00000394299 EEF1GP26641 437 aaKnown RBP16.8■□□□□ 0.28
GPC3-202ENST00000394299 POLD1P28340 1107 aa16.8■□□□□ 0.28
GPC3-202ENST00000394299 KRT9P35527 623 aa16.8■□□□□ 0.28
GPC3-202ENST00000394299 EHHADHQ08426 723 aa16.8■□□□□ 0.28
GPC3-202ENST00000394299 COASYQ13057 564 aa16.8■□□□□ 0.28
GPC3-202ENST00000394299 Q4G0T1 1027 aa16.8■□□□□ 0.28
GPC3-202ENST00000394299 HYIQ5T013 277 aa16.8■□□□□ 0.28
GPC3-202ENST00000394299 NAP1L4Q99733 375 aaKnown RBP16.8■□□□□ 0.28
GPC3-202ENST00000394299 PANK4Q9NVE7 773 aa16.8■□□□□ 0.28
GPC3-202ENST00000394299 BICDL2A1A5D9 508 aa16.8■□□□□ 0.28
GPC3-202ENST00000394299 RASSF10A6NK89 507 aa16.8■□□□□ 0.28
GPC3-202ENST00000394299 FOSP01100 380 aaPredicted RBP16.8■□□□□ 0.28
GPC3-202ENST00000394299 SPATA31C1P0DKV0 1188 aa16.8■□□□□ 0.28
GPC3-202ENST00000394299 GMPSP49915 693 aaPredicted RBP16.8■□□□□ 0.28
GPC3-202ENST00000394299 ARSHQ5FYA8 562 aa16.8■□□□□ 0.28
GPC3-202ENST00000394299 GPBP1Q86WP2 473 aa16.8■□□□□ 0.28
GPC3-202ENST00000394299 SLFN12Q8IYM2 578 aa16.8■□□□□ 0.28
GPC3-202ENST00000394299 CHURC1Q8WUH1 139 aa16.8■□□□□ 0.28
GPC3-202ENST00000394299 CHP1Q99653 195 aa16.8■□□□□ 0.28
GPC3-202ENST00000394299 WDR18Q9BV38 432 aa16.8■□□□□ 0.28
GPC3-202ENST00000394299 RANBP17Q9H2T7 1088 aaKnown RBP16.8■□□□□ 0.28
GPC3-202ENST00000394299 ABHD10Q9NUJ1 306 aa16.8■□□□□ 0.28
GPC3-202ENST00000394299 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.8■□□□□ 0.28
GPC3-202ENST00000394299 ZSCAN12O43309 604 aa16.79■□□□□ 0.28
GPC3-202ENST00000394299 CYP11B2P19099 503 aa16.79■□□□□ 0.28
GPC3-202ENST00000394299 MTIF2P46199 727 aaKnown RBP16.79■□□□□ 0.28
GPC3-202ENST00000394299 PABPC4Q13310 644 aaKnown RBP eCLIP16.79■□□□□ 0.28
GPC3-202ENST00000394299 MIIPQ5JXC2 388 aa16.79■□□□□ 0.28
GPC3-202ENST00000394299 MICALL2Q8IY33 904 aa16.79■□□□□ 0.28
GPC3-202ENST00000394299 WDR24Q96S15 920 aa16.79■□□□□ 0.28
GPC3-202ENST00000394299 FEZ1Q99689 392 aa16.79■□□□□ 0.28
GPC3-202ENST00000394299 ZHX3Q9H4I2 956 aa16.79■□□□□ 0.28
GPC3-202ENST00000394299 LZTFL1Q9NQ48 299 aa16.79■□□□□ 0.28
GPC3-202ENST00000394299 RGL1Q9NZL6 768 aa16.79■□□□□ 0.28
GPC3-202ENST00000394299 MAP3K10Q02779 954 aa16.79■□□□□ 0.28
GPC3-202ENST00000394299 MOXD1Q6UVY6 613 aa16.79■□□□□ 0.28
GPC3-202ENST00000394299 LDHDQ86WU2 507 aa16.79■□□□□ 0.28
GPC3-202ENST00000394299 CNGA4Q8IV77 575 aa16.79■□□□□ 0.28
GPC3-202ENST00000394299 ACRBPQ8NEB7 543 aa16.79■□□□□ 0.28
GPC3-202ENST00000394299 MTFR1LQ9H019 292 aa16.79■□□□□ 0.28
GPC3-202ENST00000394299 NT5C3AQ9H0P0 336 aa16.79■□□□□ 0.28
GPC3-202ENST00000394299 AGPAT5Q9NUQ2 364 aa16.79■□□□□ 0.28
GPC3-202ENST00000394299 ADGRG1Q9Y653 693 aa16.79■□□□□ 0.28
GPC3-202ENST00000394299 IGLV3-22A0A075B6J6 115 aa16.78■□□□□ 0.28
GPC3-202ENST00000394299 PIK3CDO00329 1044 aa16.78■□□□□ 0.28
GPC3-202ENST00000394299 ASNSP08243 561 aa16.78■□□□□ 0.28
GPC3-202ENST00000394299 CIITAP33076 1130 aa16.78■□□□□ 0.28
GPC3-202ENST00000394299 NCBP1Q09161 790 aaKnown RBP16.78■□□□□ 0.28
GPC3-202ENST00000394299 TBC1D8BQ0IIM8 1120 aa16.78■□□□□ 0.28
GPC3-202ENST00000394299 SEMA3FQ13275 785 aa16.78■□□□□ 0.28
GPC3-202ENST00000394299 NELFCDQ8IXH7 590 aa16.78■□□□□ 0.28
GPC3-202ENST00000394299 NOC4LQ9BVI4 516 aaKnown RBP16.78■□□□□ 0.28
GPC3-202ENST00000394299 SYNPO2Q9UMS6 1093 aa16.78■□□□□ 0.28
GPC3-202ENST00000394299 GCOM1H8Y6P7 765 aaPredicted RBP16.78■□□□□ 0.28
GPC3-202ENST00000394299 ZBTB39O15060 712 aa16.78■□□□□ 0.28
GPC3-202ENST00000394299 CHMP2AO43633 222 aa16.78■□□□□ 0.28
GPC3-202ENST00000394299 POLR2MP0CAP2 368 aa16.78■□□□□ 0.28
GPC3-202ENST00000394299 SLC12A3P55017 1021 aa16.78■□□□□ 0.28
GPC3-202ENST00000394299 TNIP1Q15025 636 aa16.78■□□□□ 0.28
GPC3-202ENST00000394299 SYCP1Q15431 976 aa16.78■□□□□ 0.28
GPC3-202ENST00000394299 GUF1Q8N442 669 aaKnown RBP16.78■□□□□ 0.28
GPC3-202ENST00000394299 CNOT7Q9UIV1 285 aaKnown RBP16.78■□□□□ 0.28
GPC3-202ENST00000394299 VAV3Q9UKW4 847 aa16.78■□□□□ 0.28
GPC3-202ENST00000394299 KIF2AO00139 706 aaPredicted RBP16.77■□□□□ 0.28
GPC3-202ENST00000394299 CCP110O43303 1012 aa16.77■□□□□ 0.28
GPC3-202ENST00000394299 GNG11P61952 73 aa16.77■□□□□ 0.28
GPC3-202ENST00000394299 HERC4Q5GLZ8 1057 aaPredicted RBP16.77■□□□□ 0.28
GPC3-202ENST00000394299 NBPF12Q5TAG4 269 aaPredicted RBP16.77■□□□□ 0.28
GPC3-202ENST00000394299 GPIHBP1Q8IV16 184 aa16.77■□□□□ 0.28
GPC3-202ENST00000394299 CPXCR1Q8N123 301 aa16.77■□□□□ 0.28
GPC3-202ENST00000394299 HACL1Q9UJ83 578 aa16.77■□□□□ 0.28
GPC3-202ENST00000394299 KDM3AQ9Y4C1 1321 aa16.77■□□□□ 0.27
GPC3-202ENST00000394299 TPM1P09493 284 aa16.77■□□□□ 0.27
GPC3-202ENST00000394299 ZNF280AP59817 542 aaPredicted RBP16.77■□□□□ 0.27
GPC3-202ENST00000394299 COBLL1Q53SF7 1204 aa16.77■□□□□ 0.27
GPC3-202ENST00000394299 FAM26FQ5R3K3 315 aa16.77■□□□□ 0.27
GPC3-202ENST00000394299 NOC3LQ8WTT2 800 aaKnown RBP16.77■□□□□ 0.27
GPC3-202ENST00000394299 PCDHA2Q9Y5H9 948 aa16.77■□□□□ 0.27
GPC3-202ENST00000394299 CYP3A4P08684 503 aa16.76■□□□□ 0.27
GPC3-202ENST00000394299 DNM2P50570 870 aa16.76■□□□□ 0.27
GPC3-202ENST00000394299 CTTNQ14247 550 aaKnown RBP16.76■□□□□ 0.27
GPC3-202ENST00000394299 HSP90AA2PQ14568 343 aaPredicted RBP16.76■□□□□ 0.27
GPC3-202ENST00000394299 CCDC155Q8N6L0 562 aa16.76■□□□□ 0.27
GPC3-202ENST00000394299 BMP2KQ9NSY1 1161 aaPredicted RBP16.76■□□□□ 0.27
GPC3-202ENST00000394299 FEM1BQ9UK73 627 aa16.76■□□□□ 0.27
GPC3-202ENST00000394299 ZNF536O15090 1300 aa16.76■□□□□ 0.27
GPC3-202ENST00000394299 KIF13BQ9NQT8 1826 aa16.76■□□□□ 0.27
GPC3-202ENST00000394299 TBX3O15119 743 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms