RNA–Protein interactions for RNA: ENST00000393387.5

PHF3-202, Transcript of PHD finger protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PHF3, Length 6,947 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-202ENST00000393387 SYTL3Q4VX76 610 aa3.53□□□□□ -1.84
PHF3-202ENST00000393387 LIN9Q5TKA1 542 aa3.53□□□□□ -1.84
PHF3-202ENST00000393387 NCAPG2Q86XI2 1143 aa3.53□□□□□ -1.84
PHF3-202ENST00000393387 RSPH1Q8WYR4 309 aa3.53□□□□□ -1.84
PHF3-202ENST00000393387 HDAC2Q92769 488 aaKnown RBP3.53□□□□□ -1.84
PHF3-202ENST00000393387 TTC17Q96AE7 1141 aa3.53□□□□□ -1.84
PHF3-202ENST00000393387 TOR3AQ9H497 397 aa3.53□□□□□ -1.84
PHF3-202ENST00000393387 ZSCAN16Q9H4T2 348 aaPredicted RBP3.53□□□□□ -1.84
PHF3-202ENST00000393387 DCDC2Q9UHG0 476 aa3.53□□□□□ -1.84
PHF3-202ENST00000393387 RABL2BQ9UNT1 228 aa3.53□□□□□ -1.84
PHF3-202ENST00000393387 PRELID1Q9Y255 219 aa3.53□□□□□ -1.84
PHF3-202ENST00000393387 PLAAQ9Y263 795 aa3.53□□□□□ -1.84
PHF3-202ENST00000393387 SUGT1Q9Y2Z0 365 aa3.53□□□□□ -1.84
PHF3-202ENST00000393387 GSPT1P15170 499 aaKnown RBP3.53□□□□□ -1.84
PHF3-202ENST00000393387 YWHABP31946 246 aaKnown RBP3.53□□□□□ -1.84
PHF3-202ENST00000393387 GGCXP38435 758 aa3.53□□□□□ -1.84
PHF3-202ENST00000393387 BCAP31P51572 246 aa3.53□□□□□ -1.84
PHF3-202ENST00000393387 DYNLT1P63172 113 aa3.53□□□□□ -1.84
PHF3-202ENST00000393387 PDE1BQ01064 536 aa3.53□□□□□ -1.84
PHF3-202ENST00000393387 NAA30Q147X3 362 aaPredicted RBP3.53□□□□□ -1.84
PHF3-202ENST00000393387 SUZ12Q15022 739 aaKnown RBP3.53□□□□□ -1.84
PHF3-202ENST00000393387 KYNUQ16719 465 aa3.53□□□□□ -1.84
PHF3-202ENST00000393387 ZSWIM7Q19AV6 140 aa3.53□□□□□ -1.84
PHF3-202ENST00000393387 TRIM71Q2Q1W2 868 aaKnown RBP3.53□□□□□ -1.84
PHF3-202ENST00000393387 IFIT1BQ5T764 474 aaKnown RBP3.53□□□□□ -1.84
PHF3-202ENST00000393387 SPATA1Q5VX52 437 aa3.53□□□□□ -1.84
PHF3-202ENST00000393387 OTUD7BQ6GQQ9 843 aa3.53□□□□□ -1.84
PHF3-202ENST00000393387 SPOPLQ6IQ16 392 aa3.53□□□□□ -1.84
PHF3-202ENST00000393387 DCUN1D2Q6PH85 259 aa3.53□□□□□ -1.84
PHF3-202ENST00000393387 TSHZ1Q6ZSZ6 1077 aa3.53□□□□□ -1.84
PHF3-202ENST00000393387 EPM2AIP1Q7L775 607 aaPredicted RBP3.53□□□□□ -1.84
PHF3-202ENST00000393387 C16orf71Q8IYS4 520 aaPredicted RBP3.53□□□□□ -1.84
PHF3-202ENST00000393387 SLC35F6Q8N357 371 aa3.53□□□□□ -1.84
PHF3-202ENST00000393387 MDM1Q8TC05 714 aa3.53□□□□□ -1.84
PHF3-202ENST00000393387 EVI5LQ96CN4 794 aa3.53□□□□□ -1.84
PHF3-202ENST00000393387 LRRC39Q96DD0 335 aa3.53□□□□□ -1.84
PHF3-202ENST00000393387 CITED4Q96RK1 184 aa3.53□□□□□ -1.84
PHF3-202ENST00000393387 MYD88Q99836 296 aa3.53□□□□□ -1.84
PHF3-202ENST00000393387 BEGAINQ9BUH8 593 aa3.53□□□□□ -1.84
PHF3-202ENST00000393387 AP1M1Q9BXS5 423 aa3.53□□□□□ -1.84
PHF3-202ENST00000393387 TRIM15Q9C019 465 aa3.53□□□□□ -1.84
PHF3-202ENST00000393387 ALG13Q9NP73 1137 aaKnown RBP3.53□□□□□ -1.84
PHF3-202ENST00000393387 CABP5Q9NP86 173 aa3.53□□□□□ -1.84
PHF3-202ENST00000393387 DDX18Q9NVP1 670 aaKnown RBP3.53□□□□□ -1.84
PHF3-202ENST00000393387 TMEM51Q9NW97 253 aa3.53□□□□□ -1.84
PHF3-202ENST00000393387 GMEB1Q9Y692 573 aa3.53□□□□□ -1.84
PHF3-202ENST00000393387 EIF4G1Q04637 1599 aaKnown RBP3.53□□□□□ -1.84
PHF3-202ENST00000393387 ASNA1O43681 348 aa3.53□□□□□ -1.84
PHF3-202ENST00000393387 SYNCRIPO60506 623 aaKnown RBP3.53□□□□□ -1.84
PHF3-202ENST00000393387 TRIM27P14373 513 aa3.53□□□□□ -1.84
PHF3-202ENST00000393387 KCNA2P16389 499 aa3.53□□□□□ -1.84
PHF3-202ENST00000393387 SMARCA1P28370 1054 aa3.53□□□□□ -1.84
PHF3-202ENST00000393387 SERPINB10P48595 397 aa3.53□□□□□ -1.84
PHF3-202ENST00000393387 AK2P54819 239 aa3.53□□□□□ -1.84
PHF3-202ENST00000393387 TFAP4Q01664 338 aa3.53□□□□□ -1.84
PHF3-202ENST00000393387 KLHL30Q0D2K2 578 aa3.53□□□□□ -1.84
PHF3-202ENST00000393387 PPP6R3Q5H9R7 873 aaPredicted RBP3.53□□□□□ -1.84
PHF3-202ENST00000393387 SFMBT2Q5VUG0 894 aa3.53□□□□□ -1.84
PHF3-202ENST00000393387 PLEKHA7Q6IQ23 1121 aa3.53□□□□□ -1.84
PHF3-202ENST00000393387 IYDQ6PHW0 289 aa3.53□□□□□ -1.84
PHF3-202ENST00000393387 KLHL17Q6TDP4 642 aa3.53□□□□□ -1.84
PHF3-202ENST00000393387 KLHL24Q6TFL4 600 aa3.53□□□□□ -1.84
PHF3-202ENST00000393387 TRIM67Q6ZTA4 783 aa3.53□□□□□ -1.84
PHF3-202ENST00000393387 BZW1Q7L1Q6 419 aaKnown RBP3.53□□□□□ -1.84
PHF3-202ENST00000393387 TAS2R42Q7RTR8 314 aa3.53□□□□□ -1.84
PHF3-202ENST00000393387 FAM9CQ8IZT9 166 aa3.53□□□□□ -1.84
PHF3-202ENST00000393387 TMTC2Q8N394 836 aa3.53□□□□□ -1.84
PHF3-202ENST00000393387 MIGA1Q8NAN2 632 aa3.53□□□□□ -1.84
PHF3-202ENST00000393387 RDH13Q8NBN7 331 aa3.53□□□□□ -1.84
PHF3-202ENST00000393387 DMAP1Q9NPF5 467 aaPredicted RBP3.53□□□□□ -1.84
PHF3-202ENST00000393387 C8orf4Q9NR00 106 aa3.53□□□□□ -1.84
PHF3-202ENST00000393387 ZNF180Q9UJW8 692 aa3.53□□□□□ -1.84
PHF3-202ENST00000393387 DHX57Q6P158 1386 aaKnown RBP3.53□□□□□ -1.84
PHF3-202ENST00000393387 RRBP1Q9P2E9 1410 aaKnown RBP3.53□□□□□ -1.84
PHF3-202ENST00000393387 A0A087WWV3 80 aa3.53□□□□□ -1.85
PHF3-202ENST00000393387 SPDYE5A6NIY4 337 aa3.53□□□□□ -1.85
PHF3-202ENST00000393387 SGK1O00141 431 aa3.53□□□□□ -1.85
PHF3-202ENST00000393387 DDX39AO00148 427 aaKnown RBP3.53□□□□□ -1.85
PHF3-202ENST00000393387 HEXIM1O94992 359 aaKnown RBP3.53□□□□□ -1.85
PHF3-202ENST00000393387 INHBAP08476 426 aa3.53□□□□□ -1.85
PHF3-202ENST00000393387 TCN1P20061 433 aaPredicted RBP3.53□□□□□ -1.85
PHF3-202ENST00000393387 PTGS2P35354 604 aa3.53□□□□□ -1.85
PHF3-202ENST00000393387 TNNI2P48788 182 aa3.53□□□□□ -1.85
PHF3-202ENST00000393387 ALDH18A1P54886 795 aaKnown RBP3.53□□□□□ -1.85
PHF3-202ENST00000393387 NAPAP54920 295 aa3.53□□□□□ -1.85
PHF3-202ENST00000393387 PLOD1Q02809 727 aaPredicted RBP3.53□□□□□ -1.85
PHF3-202ENST00000393387 ADCK5Q3MIX3 580 aa3.53□□□□□ -1.85
PHF3-202ENST00000393387 SERBP1Q8NC51 408 aaKnown RBP eCLIP3.53□□□□□ -1.85
PHF3-202ENST00000393387 NELFBQ8WX92 580 aa3.53□□□□□ -1.85
PHF3-202ENST00000393387 ABHD8Q96I13 439 aa3.53□□□□□ -1.85
PHF3-202ENST00000393387 CNDP1Q96KN2 507 aa3.53□□□□□ -1.85
PHF3-202ENST00000393387 TSPAN18Q96SJ8 248 aa3.53□□□□□ -1.85
PHF3-202ENST00000393387 PPP1R16BQ96T49 567 aa3.53□□□□□ -1.85
PHF3-202ENST00000393387 CCT7Q99832 543 aa3.53□□□□□ -1.85
PHF3-202ENST00000393387 PDCD10Q9BUL8 212 aa3.53□□□□□ -1.85
PHF3-202ENST00000393387 TEX12Q9BXU0 123 aa3.53□□□□□ -1.85
PHF3-202ENST00000393387 CCSER1Q9C0I3 900 aa3.53□□□□□ -1.85
PHF3-202ENST00000393387 REXO4Q9GZR2 422 aaKnown RBP3.53□□□□□ -1.85
PHF3-202ENST00000393387 SPRTNQ9H040 489 aaPredicted RBP3.53□□□□□ -1.85
PHF3-202ENST00000393387 C10orf88Q9H8K7 445 aa3.53□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms