RNA–Protein interactions for RNA: ENST00000392811.6

SMARCD3-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 1 (best) BASIC

Gene SMARCD3, Length 2,018 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-203ENST00000392811 TBX3O15119 743 aa28.49■■■□□ 2.15
SMARCD3-203ENST00000392811 FAM86B2P0C5J1 330 aa28.49■■■□□ 2.15
SMARCD3-203ENST00000392811 MAP3K9P80192 1104 aa28.49■■■□□ 2.15
SMARCD3-203ENST00000392811 GOPCQ9HD26 462 aa28.49■■■□□ 2.15
SMARCD3-203ENST00000392811 BMP2KQ9NSY1 1161 aaPredicted RBP28.49■■■□□ 2.15
SMARCD3-203ENST00000392811 FAM83BQ5T0W9 1011 aa28.48■■■□□ 2.15
SMARCD3-203ENST00000392811 NUP58Q9BVL2 599 aa28.48■■■□□ 2.15
SMARCD3-203ENST00000392811 CARD6Q9BX69 1037 aa28.48■■■□□ 2.15
SMARCD3-203ENST00000392811 KIF5CO60282 957 aa28.48■■■□□ 2.15
SMARCD3-203ENST00000392811 RETREG2Q8NC44 543 aa28.48■■■□□ 2.15
SMARCD3-203ENST00000392811 MNS1Q8NEH6 495 aa28.48■■■□□ 2.15
SMARCD3-203ENST00000392811 ERGIC2Q96RQ1 377 aa28.48■■■□□ 2.15
SMARCD3-203ENST00000392811 SLF1Q9BQI6 1058 aa28.48■■■□□ 2.15
SMARCD3-203ENST00000392811 TMEM39BQ9GZU3 492 aa28.48■■■□□ 2.15
SMARCD3-203ENST00000392811 ZNRF3Q9ULT6 936 aa28.48■■■□□ 2.15
SMARCD3-203ENST00000392811 TRIM21P19474 475 aaKnown RBP28.47■■■□□ 2.15
SMARCD3-203ENST00000392811 FAM26FQ5R3K3 315 aa28.47■■■□□ 2.15
SMARCD3-203ENST00000392811 WDR59Q6PJI9 974 aa28.47■■■□□ 2.15
SMARCD3-203ENST00000392811 GPBP1Q86WP2 473 aa28.47■■■□□ 2.15
SMARCD3-203ENST00000392811 MYOCDQ8IZQ8 938 aa28.47■■■□□ 2.15
SMARCD3-203ENST00000392811 ZNF397Q8NF99 534 aaPredicted RBP28.47■■■□□ 2.15
SMARCD3-203ENST00000392811 AGPAT5Q9NUQ2 364 aa28.47■■■□□ 2.15
SMARCD3-203ENST00000392811 MRFAP1Q9Y605 127 aa28.47■■■□□ 2.15
SMARCD3-203ENST00000392811 PIK3CDO00329 1044 aa28.47■■■□□ 2.15
SMARCD3-203ENST00000392811 FGFR1OPO95684 399 aaKnown RBP28.47■■■□□ 2.15
SMARCD3-203ENST00000392811 CIITAP33076 1130 aa28.47■■■□□ 2.15
SMARCD3-203ENST00000392811 FKBP15Q5T1M5 1219 aa28.47■■■□□ 2.15
SMARCD3-203ENST00000392811 FKBP1CQ5VVH2 108 aa28.47■■■□□ 2.15
SMARCD3-203ENST00000392811 HAUS3Q68CZ6 603 aa28.47■■■□□ 2.15
SMARCD3-203ENST00000392811 LRRC55Q6ZSA7 311 aa28.47■■■□□ 2.15
SMARCD3-203ENST00000392811 DEFB132Q7Z7B7 95 aa28.47■■■□□ 2.15
SMARCD3-203ENST00000392811 FRMD4AQ9P2Q2 1039 aaPredicted RBP28.47■■■□□ 2.15
SMARCD3-203ENST00000392811 EPN1Q9Y6I3 576 aaPredicted RBP28.47■■■□□ 2.15
SMARCD3-203ENST00000392811 SMCHD1A6NHR9 2005 aa28.46■■■□□ 2.15
SMARCD3-203ENST00000392811 NPHP3-ACAD11A0A0J9YXS1 232 aa28.46■■■□□ 2.15
SMARCD3-203ENST00000392811 POTEFA5A3E0 1075 aa28.46■■■□□ 2.15
SMARCD3-203ENST00000392811 POTEIP0CG38 1075 aa28.46■■■□□ 2.15
SMARCD3-203ENST00000392811 TSR1Q2NL82 804 aaKnown RBP28.46■■■□□ 2.15
SMARCD3-203ENST00000392811 ARHGAP29Q52LW3 1261 aa28.46■■■□□ 2.15
SMARCD3-203ENST00000392811 NCAPH2Q6IBW4 605 aa28.46■■■□□ 2.15
SMARCD3-203ENST00000392811 POTEGQ6S5H5 508 aa28.46■■■□□ 2.15
SMARCD3-203ENST00000392811 POTEEQ6S8J3 1075 aa28.46■■■□□ 2.15
SMARCD3-203ENST00000392811 NIM1KQ8IY84 436 aa28.46■■■□□ 2.15
SMARCD3-203ENST00000392811 PCMTD1Q96MG8 357 aaPredicted RBP28.46■■■□□ 2.15
SMARCD3-203ENST00000392811 VPS33BQ9H267 617 aa28.46■■■□□ 2.15
SMARCD3-203ENST00000392811 NDUFA10O95299 355 aa28.45■■■□□ 2.15
SMARCD3-203ENST00000392811 CYP11B2P19099 503 aa28.45■■■□□ 2.15
SMARCD3-203ENST00000392811 VWA3BQ502W6 1294 aa28.45■■■□□ 2.15
SMARCD3-203ENST00000392811 FOXR2Q6PJQ5 311 aa28.45■■■□□ 2.15
SMARCD3-203ENST00000392811 MIGA2Q7L4E1 593 aa28.45■■■□□ 2.15
SMARCD3-203ENST00000392811 CATSPER3Q86XQ3 398 aa28.45■■■□□ 2.15
SMARCD3-203ENST00000392811 CCDC65Q8IXS2 484 aa28.45■■■□□ 2.15
SMARCD3-203ENST00000392811 MTMR14Q8NCE2 650 aa28.45■■■□□ 2.15
SMARCD3-203ENST00000392811 FAM20AQ96MK3 541 aa28.45■■■□□ 2.15
SMARCD3-203ENST00000392811 TSG101Q99816 390 aa28.45■■■□□ 2.15
SMARCD3-203ENST00000392811 TADA3O75528 432 aa28.45■■■□□ 2.14
SMARCD3-203ENST00000392811 ABL1P00519 1130 aa28.45■■■□□ 2.14
SMARCD3-203ENST00000392811 ARHGAP25P42331 645 aa28.45■■■□□ 2.14
SMARCD3-203ENST00000392811 AGBL3Q8NEM8 1001 aa28.45■■■□□ 2.14
SMARCD3-203ENST00000392811 FGFBP2Q9BYJ0 223 aa28.45■■■□□ 2.14
SMARCD3-203ENST00000392811 ABCB11O95342 1321 aa28.45■■■□□ 2.14
SMARCD3-203ENST00000392811 KIF13BQ9NQT8 1826 aa28.44■■■□□ 2.14
SMARCD3-203ENST00000392811 MSH4O15457 936 aa28.44■■■□□ 2.14
SMARCD3-203ENST00000392811 TBC1D12O60347 775 aa28.44■■■□□ 2.14
SMARCD3-203ENST00000392811 CYP3A4P08684 503 aa28.44■■■□□ 2.14
SMARCD3-203ENST00000392811 SLC12A3P55017 1021 aa28.44■■■□□ 2.14
SMARCD3-203ENST00000392811 CACNB1Q02641 598 aaPredicted RBP28.44■■■□□ 2.14
SMARCD3-203ENST00000392811 MEA1Q16626 185 aa28.44■■■□□ 2.14
SMARCD3-203ENST00000392811 ZNF569Q5MCW4 686 aa28.44■■■□□ 2.14
SMARCD3-203ENST00000392811 FBXO38Q6PIJ6 1188 aa28.44■■■□□ 2.14
SMARCD3-203ENST00000392811 ERMNQ8TAM6 284 aa28.44■■■□□ 2.14
SMARCD3-203ENST00000392811 NDST4Q9H3R1 872 aa28.44■■■□□ 2.14
SMARCD3-203ENST00000392811 TBC1D7Q9P0N9 293 aa28.44■■■□□ 2.14
SMARCD3-203ENST00000392811 REXO2Q9Y3B8 237 aaKnown RBP28.44■■■□□ 2.14
SMARCD3-203ENST00000392811 PCDHA2Q9Y5H9 948 aa28.44■■■□□ 2.14
SMARCD3-203ENST00000392811 ZBED6P86452 979 aa28.43■■■□□ 2.14
SMARCD3-203ENST00000392811 MAN2A1Q16706 1144 aa28.43■■■□□ 2.14
SMARCD3-203ENST00000392811 ZCWPW2Q504Y3 356 aa28.43■■■□□ 2.14
SMARCD3-203ENST00000392811 CCDC174Q6PII3 467 aa28.43■■■□□ 2.14
SMARCD3-203ENST00000392811 CYP2W1Q8TAV3 490 aa28.43■■■□□ 2.14
SMARCD3-203ENST00000392811 SPATA31C1P0DKV0 1188 aa28.43■■■□□ 2.14
SMARCD3-203ENST00000392811 BAG6P46379 1132 aa28.43■■■□□ 2.14
SMARCD3-203ENST00000392811 TRAF1Q13077 416 aa28.43■■■□□ 2.14
SMARCD3-203ENST00000392811 ZYXQ15942 572 aaKnown RBP28.43■■■□□ 2.14
SMARCD3-203ENST00000392811 ARSHQ5FYA8 562 aa28.43■■■□□ 2.14
SMARCD3-203ENST00000392811 FIGNQ5HY92 759 aa28.43■■■□□ 2.14
SMARCD3-203ENST00000392811 FAM83AQ86UY5 434 aa28.43■■■□□ 2.14
SMARCD3-203ENST00000392811 VCPKMTQ9H867 229 aa28.43■■■□□ 2.14
SMARCD3-203ENST00000392811 RPA1P27694 616 aa28.42■■■□□ 2.14
SMARCD3-203ENST00000392811 ZNF76P36508 570 aa28.42■■■□□ 2.14
SMARCD3-203ENST00000392811 RAD51AP2Q09MP3 1159 aa28.42■■■□□ 2.14
SMARCD3-203ENST00000392811 UBXN4Q92575 508 aa28.42■■■□□ 2.14
SMARCD3-203ENST00000392811 RANBP17Q9H2T7 1088 aaKnown RBP28.42■■■□□ 2.14
SMARCD3-203ENST00000392811 VAV3Q9UKW4 847 aa28.42■■■□□ 2.14
SMARCD3-203ENST00000392811 A0A1W2PQJ5 194 aa28.42■■■□□ 2.14
SMARCD3-203ENST00000392811 EFCAB8A8MWE9 144 aa28.42■■■□□ 2.14
SMARCD3-203ENST00000392811 PSMC6P62333 389 aa28.42■■■□□ 2.14
SMARCD3-203ENST00000392811 CXCL9Q07325 125 aa28.42■■■□□ 2.14
SMARCD3-203ENST00000392811 CHURC1Q8WUH1 139 aa28.42■■■□□ 2.14
SMARCD3-203ENST00000392811 TBC1D5Q92609 795 aa28.42■■■□□ 2.14
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms