RNA–Protein interactions for RNA: ENST00000390846.1

SNORA40.19-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 128 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.19-201ENST00000390846 ETV3LQ6ZN32 361 aa3.18□□□□□ -1.9
SNORA40.19-201ENST00000390846 BORCS6Q96GS4 357 aa3.18□□□□□ -1.9
SNORA40.19-201ENST00000390846 MARCH2Q9P0N8 246 aa3.18□□□□□ -1.9
SNORA40.19-201ENST00000390846 DBR1Q9UK59 544 aaKnown RBP3.18□□□□□ -1.9
SNORA40.19-201ENST00000390846 AKT3Q9Y243 479 aa3.18□□□□□ -1.9
SNORA40.19-201ENST00000390846 NPFFR2Q9Y5X5 522 aa3.18□□□□□ -1.9
SNORA40.19-201ENST00000390846 ANKRD34BA5PLL1 514 aa3.17□□□□□ -1.9
SNORA40.19-201ENST00000390846 C9orf118A6NHY6 69 aa3.17□□□□□ -1.9
SNORA40.19-201ENST00000390846 SUV39H1O43463 412 aa3.17□□□□□ -1.9
SNORA40.19-201ENST00000390846 NPHS1O60500 1241 aa3.17□□□□□ -1.9
SNORA40.19-201ENST00000390846 KLHL18O94889 574 aa3.17□□□□□ -1.9
SNORA40.19-201ENST00000390846 FSHBP01225 129 aa3.17□□□□□ -1.9
SNORA40.19-201ENST00000390846 ERCC5P28715 1186 aaPredicted RBP3.17□□□□□ -1.9
SNORA40.19-201ENST00000390846 BCL6P41182 706 aa3.17□□□□□ -1.9
SNORA40.19-201ENST00000390846 PRSS53Q2L4Q9 553 aa3.17□□□□□ -1.9
SNORA40.19-201ENST00000390846 EMC4Q5J8M3 183 aa3.17□□□□□ -1.9
SNORA40.19-201ENST00000390846 CD300LDQ6UXZ3 194 aa3.17□□□□□ -1.9
SNORA40.19-201ENST00000390846 BVESQ8NE79 360 aa3.17□□□□□ -1.9
SNORA40.19-201ENST00000390846 DVL3Q92997 716 aaPredicted RBP3.17□□□□□ -1.9
SNORA40.19-201ENST00000390846 RNF34Q969K3 372 aa3.17□□□□□ -1.9
SNORA40.19-201ENST00000390846 LOXL4Q96JB6 756 aa3.17□□□□□ -1.9
SNORA40.19-201ENST00000390846 PDGFDQ9GZP0 370 aaPredicted RBP3.17□□□□□ -1.9
SNORA40.19-201ENST00000390846 PCED1AQ9H1Q7 454 aa3.17□□□□□ -1.9
SNORA40.19-201ENST00000390846 TELO2Q9Y4R8 837 aa3.17□□□□□ -1.9
SNORA40.19-201ENST00000390846 A0A1W2PQJ5 194 aa3.16□□□□□ -1.9
SNORA40.19-201ENST00000390846 OVOL3O00110 214 aa3.16□□□□□ -1.9
SNORA40.19-201ENST00000390846 MSCO60682 206 aa3.16□□□□□ -1.9
SNORA40.19-201ENST00000390846 PPM1BO75688 479 aa3.16□□□□□ -1.9
SNORA40.19-201ENST00000390846 CNOT4O95628 575 aaKnown RBP3.16□□□□□ -1.9
SNORA40.19-201ENST00000390846 ITGAVP06756 1048 aa3.16□□□□□ -1.9
SNORA40.19-201ENST00000390846 C6P13671 934 aa3.16□□□□□ -1.9
SNORA40.19-201ENST00000390846 TACR2P21452 398 aa3.16□□□□□ -1.9
SNORA40.19-201ENST00000390846 IL13P35225 146 aa3.16□□□□□ -1.9
SNORA40.19-201ENST00000390846 GRIA2P42262 883 aa3.16□□□□□ -1.9
SNORA40.19-201ENST00000390846 CCDC144BQ3MJ40 725 aa3.16□□□□□ -1.9
SNORA40.19-201ENST00000390846 SLC35F1Q5T1Q4 408 aa3.16□□□□□ -1.9
SNORA40.19-201ENST00000390846 ERICH6BQ5W0A0 696 aa3.16□□□□□ -1.9
SNORA40.19-201ENST00000390846 EGFLAMQ63HQ2 1017 aa3.16□□□□□ -1.9
SNORA40.19-201ENST00000390846 TEPPQ6URK8 271 aa3.16□□□□□ -1.9
SNORA40.19-201ENST00000390846 TTLL7Q6ZT98 887 aa3.16□□□□□ -1.9
SNORA40.19-201ENST00000390846 ZNF654Q8IZM8 581 aa3.16□□□□□ -1.9
SNORA40.19-201ENST00000390846 LGI4Q8N135 537 aa3.16□□□□□ -1.9
SNORA40.19-201ENST00000390846 TTLL6Q8N841 843 aa3.16□□□□□ -1.9
SNORA40.19-201ENST00000390846 Q8TCH9 128 aa3.16□□□□□ -1.9
SNORA40.19-201ENST00000390846 BTN2A2Q8WVV5 523 aa3.16□□□□□ -1.9
SNORA40.19-201ENST00000390846 SEC14L1Q92503 715 aa3.16□□□□□ -1.9
SNORA40.19-201ENST00000390846 GPRASP2Q96D09 838 aa3.16□□□□□ -1.9
SNORA40.19-201ENST00000390846 POLR3GLQ9BT43 218 aa3.16□□□□□ -1.9
SNORA40.19-201ENST00000390846 ING1Q9UK53 422 aaPredicted RBP3.16□□□□□ -1.9
SNORA40.19-201ENST00000390846 NUDT5Q9UKK9 219 aa3.16□□□□□ -1.9
SNORA40.19-201ENST00000390846 ZNF652Q9Y2D9 606 aa3.16□□□□□ -1.9
SNORA40.19-201ENST00000390846 TBX22Q9Y458 520 aa3.16□□□□□ -1.9
SNORA40.19-201ENST00000390846 B2RBV5 119 aa3.15□□□□□ -1.91
SNORA40.19-201ENST00000390846 MARCH6O60337 910 aa3.15□□□□□ -1.91
SNORA40.19-201ENST00000390846 RAB11FIP3O75154 756 aa3.15□□□□□ -1.91
SNORA40.19-201ENST00000390846 NASPP49321 788 aaPredicted RBP3.15□□□□□ -1.91
SNORA40.19-201ENST00000390846 GFRA1P56159 465 aa3.15□□□□□ -1.91
SNORA40.19-201ENST00000390846 KLF10Q13118 480 aa3.15□□□□□ -1.91
SNORA40.19-201ENST00000390846 VHLLQ6RSH7 139 aa3.15□□□□□ -1.91
SNORA40.19-201ENST00000390846 Q6ZSN1 163 aa3.15□□□□□ -1.91
SNORA40.19-201ENST00000390846 MILR1Q7Z6M3 343 aa3.15□□□□□ -1.91
SNORA40.19-201ENST00000390846 ADAT2Q7Z6V5 191 aaKnown RBP3.15□□□□□ -1.91
SNORA40.19-201ENST00000390846 ZNF227Q86WZ6 799 aa3.15□□□□□ -1.91
SNORA40.19-201ENST00000390846 NT5DC4Q86YG4 428 aa3.15□□□□□ -1.91
SNORA40.19-201ENST00000390846 DCP2Q8IU60 420 aaKnown RBP3.15□□□□□ -1.91
SNORA40.19-201ENST00000390846 ANKRD13AQ8IZ07 590 aa3.15□□□□□ -1.91
SNORA40.19-201ENST00000390846 NUDT10Q8NFP7 164 aa3.15□□□□□ -1.91
SNORA40.19-201ENST00000390846 OR6P1Q8NGX9 317 aa3.15□□□□□ -1.91
SNORA40.19-201ENST00000390846 SH3RF3Q8TEJ3 882 aaPredicted RBP3.15□□□□□ -1.91
SNORA40.19-201ENST00000390846 PPIL4Q8WUA2 492 aaKnown RBP eCLIP3.15□□□□□ -1.91
SNORA40.19-201ENST00000390846 CLEC4DQ8WXI8 215 aa3.15□□□□□ -1.91
SNORA40.19-201ENST00000390846 NUDT11Q96G61 164 aa3.15□□□□□ -1.91
SNORA40.19-201ENST00000390846 KLC2Q9H0B6 622 aa3.15□□□□□ -1.91
SNORA40.19-201ENST00000390846 GBP3Q9H0R5 595 aa3.15□□□□□ -1.91
SNORA40.19-201ENST00000390846 ACBD3Q9H3P7 528 aa3.15□□□□□ -1.91
SNORA40.19-201ENST00000390846 PPARGC1AQ9UBK2 798 aaKnown RBP3.15□□□□□ -1.91
SNORA40.19-201ENST00000390846 WDR3Q9UNX4 943 aaKnown RBP eCLIP3.15□□□□□ -1.91
SNORA40.19-201ENST00000390846 SLC12A7Q9Y666 1083 aa3.15□□□□□ -1.91
SNORA40.19-201ENST00000390846 TRBV23OR9-2A0A075B6M9 112 aa3.14□□□□□ -1.91
SNORA40.19-201ENST00000390846 LAMTOR5O43504 91 aa3.14□□□□□ -1.91
SNORA40.19-201ENST00000390846 FOXS1O43638 330 aa3.14□□□□□ -1.91
SNORA40.19-201ENST00000390846 IL18BPO95998 194 aa3.14□□□□□ -1.91
SNORA40.19-201ENST00000390846 KIAA2012Q0VF49 1180 aa3.14□□□□□ -1.91
SNORA40.19-201ENST00000390846 HABP4Q5JVS0 413 aaKnown RBP3.14□□□□□ -1.91
SNORA40.19-201ENST00000390846 PHF19Q5T6S3 580 aa3.14□□□□□ -1.91
SNORA40.19-201ENST00000390846 ACBD5Q5T8D3 534 aaPredicted RBP3.14□□□□□ -1.91
SNORA40.19-201ENST00000390846 MROH9Q5TGP6 573 aa3.14□□□□□ -1.91
SNORA40.19-201ENST00000390846 CEP68Q76N32 757 aa3.14□□□□□ -1.91
SNORA40.19-201ENST00000390846 CABP7Q86V35 215 aa3.14□□□□□ -1.91
SNORA40.19-201ENST00000390846 ZFPM1Q8IX07 1006 aa3.14□□□□□ -1.91
SNORA40.19-201ENST00000390846 TMEM145Q8NBT3 493 aa3.14□□□□□ -1.91
SNORA40.19-201ENST00000390846 LCORQ96JN0 433 aaPredicted RBP3.14□□□□□ -1.91
SNORA40.19-201ENST00000390846 ZSWIM3Q96MP5 696 aa3.14□□□□□ -1.91
SNORA40.19-201ENST00000390846 MENTQ9BUN1 341 aa3.14□□□□□ -1.91
SNORA40.19-201ENST00000390846 DTLQ9NZJ0 730 aa3.14□□□□□ -1.91
SNORA40.19-201ENST00000390846 TIMM13Q9Y5L4 95 aaPredicted RBP3.14□□□□□ -1.91
SNORA40.19-201ENST00000390846 TLDC2A0PJX2 215 aa3.13□□□□□ -1.91
SNORA40.19-201ENST00000390846 SCAMP3O14828 347 aaKnown RBP3.13□□□□□ -1.91
SNORA40.19-201ENST00000390846 KNG1P01042 644 aa3.13□□□□□ -1.91
SNORA40.19-201ENST00000390846 AMHP03971 560 aa3.13□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms