RNA–Protein interactions for RNA: ENST00000377194.7

TRIM27-201, Transcript of tripartite motif containing 27, humanhuman

TSL 1 (best) BASIC

Gene TRIM27, Length 2,686 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM27-201ENST00000377194 AMPD3Q01432 767 aa19.01■□□□□ 0.63
TRIM27-201ENST00000377194 TRIM14Q14142 442 aa19.01■□□□□ 0.63
TRIM27-201ENST00000377194 SV2BQ7L1I2 683 aa19.01■□□□□ 0.63
TRIM27-201ENST00000377194 PODNQ7Z5L7 613 aa19.01■□□□□ 0.63
TRIM27-201ENST00000377194 ZDHHC15Q96MV8 337 aa19.01■□□□□ 0.63
TRIM27-201ENST00000377194 HDAC6Q9UBN7 1215 aa19.01■□□□□ 0.63
TRIM27-201ENST00000377194 TRIM10Q9UDY6 481 aa19.01■□□□□ 0.63
TRIM27-201ENST00000377194 NRXN2Q9P2S2 1712 aa19.01■□□□□ 0.63
TRIM27-201ENST00000377194 A0A1W2PQC6 194 aa19■□□□□ 0.63
TRIM27-201ENST00000377194 CCDC172P0C7W6 258 aa19■□□□□ 0.63
TRIM27-201ENST00000377194 GPATCH4Q5T3I0 446 aaKnown RBP19■□□□□ 0.63
TRIM27-201ENST00000377194 SH3BP5LQ7L8J4 393 aa19■□□□□ 0.63
TRIM27-201ENST00000377194 LARP4BQ92615 738 aaKnown RBP19■□□□□ 0.63
TRIM27-201ENST00000377194 MTMR8Q96EF0 704 aa19■□□□□ 0.63
TRIM27-201ENST00000377194 CEP89Q96ST8 783 aa19■□□□□ 0.63
TRIM27-201ENST00000377194 ZNF219Q9P2Y4 722 aaPredicted RBP19■□□□□ 0.63
TRIM27-201ENST00000377194 FAM198AQ9UFP1 575 aa19■□□□□ 0.63
TRIM27-201ENST00000377194 APBA3O96018 575 aa19■□□□□ 0.63
TRIM27-201ENST00000377194 GSCP56915 257 aaPredicted RBP19■□□□□ 0.63
TRIM27-201ENST00000377194 WDR59Q6PJI9 974 aa19■□□□□ 0.63
TRIM27-201ENST00000377194 AGPAT5Q9NUQ2 364 aa19■□□□□ 0.63
TRIM27-201ENST00000377194 MAGEC2Q9UBF1 373 aaPredicted RBP19■□□□□ 0.63
TRIM27-201ENST00000377194 REXO2Q9Y3B8 237 aaKnown RBP19■□□□□ 0.63
TRIM27-201ENST00000377194 USP17L15C9J2P7 530 aa18.99■□□□□ 0.63
TRIM27-201ENST00000377194 USP17L13C9JLJ4 530 aa18.99■□□□□ 0.63
TRIM27-201ENST00000377194 USP17L11C9JVI0 530 aa18.99■□□□□ 0.63
TRIM27-201ENST00000377194 USP17L18D6R9N7 530 aa18.99■□□□□ 0.63
TRIM27-201ENST00000377194 USP17L22D6RA61 530 aa18.99■□□□□ 0.63
TRIM27-201ENST00000377194 USP17L17D6RBQ6 530 aa18.99■□□□□ 0.63
TRIM27-201ENST00000377194 USP17L19D6RCP7 530 aa18.99■□□□□ 0.63
TRIM27-201ENST00000377194 USP17L20D6RJB6 530 aa18.99■□□□□ 0.63
TRIM27-201ENST00000377194 EEF2P13639 858 aaKnown RBP18.99■□□□□ 0.63
TRIM27-201ENST00000377194 USP17L24Q0WX57 530 aa18.99■□□□□ 0.63
TRIM27-201ENST00000377194 PPP4R3AQ6IN85 833 aa18.99■□□□□ 0.63
TRIM27-201ENST00000377194 USP17L6PQ6QN14 398 aa18.99■□□□□ 0.63
TRIM27-201ENST00000377194 SIAH1Q8IUQ4 282 aa18.99■□□□□ 0.63
TRIM27-201ENST00000377194 BANK1Q8NDB2 785 aa18.99■□□□□ 0.63
TRIM27-201ENST00000377194 OR8K1Q8NGG5 319 aa18.99■□□□□ 0.63
TRIM27-201ENST00000377194 CUL5Q93034 780 aa18.99■□□□□ 0.63
TRIM27-201ENST00000377194 CNOT6LQ96LI5 555 aaKnown RBP18.99■□□□□ 0.63
TRIM27-201ENST00000377194 PSTPIP2Q9H939 334 aa18.99■□□□□ 0.63
TRIM27-201ENST00000377194 GUCA1BQ9UMX6 200 aa18.99■□□□□ 0.63
TRIM27-201ENST00000377194 LUC7L2Q9Y383 392 aaKnown RBP18.99■□□□□ 0.63
TRIM27-201ENST00000377194 SAMM50Q9Y512 469 aa18.99■□□□□ 0.63
TRIM27-201ENST00000377194 MYH4Q9Y623 1939 aa18.99■□□□□ 0.63
TRIM27-201ENST00000377194 SRGAP2O75044 1071 aa18.99■□□□□ 0.63
TRIM27-201ENST00000377194 AARSP49588 968 aaKnown RBP eCLIP18.99■□□□□ 0.63
TRIM27-201ENST00000377194 PDIA5Q14554 519 aa18.99■□□□□ 0.63
TRIM27-201ENST00000377194 MIIPQ5JXC2 388 aa18.99■□□□□ 0.63
TRIM27-201ENST00000377194 SNX29Q8TEQ0 813 aa18.99■□□□□ 0.63
TRIM27-201ENST00000377194 CCDC47Q96A33 483 aaKnown RBP18.99■□□□□ 0.63
TRIM27-201ENST00000377194 DDX25Q9UHL0 483 aaKnown RBP18.99■□□□□ 0.63
TRIM27-201ENST00000377194 DNM2P50570 870 aa18.98■□□□□ 0.63
TRIM27-201ENST00000377194 RBM5P52756 815 aaKnown RBP eCLIP18.98■□□□□ 0.63
TRIM27-201ENST00000377194 USP14P54578 494 aa18.98■□□□□ 0.63
TRIM27-201ENST00000377194 TMEM266Q2M3C6 531 aa18.98■□□□□ 0.63
TRIM27-201ENST00000377194 CNNM4Q6P4Q7 775 aa18.98■□□□□ 0.63
TRIM27-201ENST00000377194 CAPZA3Q96KX2 299 aa18.98■□□□□ 0.63
TRIM27-201ENST00000377194 DNAJC7Q99615 494 aa18.98■□□□□ 0.63
TRIM27-201ENST00000377194 TMX4Q9H1E5 349 aaPredicted RBP18.98■□□□□ 0.63
TRIM27-201ENST00000377194 VIPAS39Q9H9C1 493 aa18.98■□□□□ 0.63
TRIM27-201ENST00000377194 MYO1AQ9UBC5 1043 aa18.98■□□□□ 0.63
TRIM27-201ENST00000377194 CAPN11Q9UMQ6 739 aa18.98■□□□□ 0.63
TRIM27-201ENST00000377194 CEP83Q9Y592 693 aa18.98■□□□□ 0.63
TRIM27-201ENST00000377194 EPN1Q9Y6I3 576 aaPredicted RBP18.98■□□□□ 0.63
TRIM27-201ENST00000377194 GREB1LQ9C091 1923 aaPredicted RBP18.98■□□□□ 0.63
TRIM27-201ENST00000377194 SCN9AQ15858 1988 aa18.98■□□□□ 0.63
TRIM27-201ENST00000377194 BICDL2A1A5D9 508 aa18.98■□□□□ 0.63
TRIM27-201ENST00000377194 PLSCR1O15162 318 aa18.98■□□□□ 0.63
TRIM27-201ENST00000377194 DACT2Q5SW24 774 aa18.98■□□□□ 0.63
TRIM27-201ENST00000377194 PPP1R18Q6NYC8 613 aa18.98■□□□□ 0.63
TRIM27-201ENST00000377194 GLIS3Q8NEA6 775 aa18.98■□□□□ 0.63
TRIM27-201ENST00000377194 NOC3LQ8WTT2 800 aaKnown RBP18.98■□□□□ 0.63
TRIM27-201ENST00000377194 CDK5RAP3Q96JB5 506 aa18.98■□□□□ 0.63
TRIM27-201ENST00000377194 TTYH3Q9C0H2 523 aa18.98■□□□□ 0.63
TRIM27-201ENST00000377194 STK17AQ9UEE5 414 aa18.98■□□□□ 0.63
TRIM27-201ENST00000377194 TFR2Q9UP52 801 aa18.98■□□□□ 0.63
TRIM27-201ENST00000377194 MYH7BA7E2Y1 1941 aa18.98■□□□□ 0.63
TRIM27-201ENST00000377194 EBAG9O00559 213 aa18.97■□□□□ 0.63
TRIM27-201ENST00000377194 IRAK1P51617 712 aa18.97■□□□□ 0.63
TRIM27-201ENST00000377194 MRPL12P52815 198 aaKnown RBP18.97■□□□□ 0.63
TRIM27-201ENST00000377194 TBC1D8BQ0IIM8 1120 aa18.97■□□□□ 0.63
TRIM27-201ENST00000377194 CENPPQ6IPU0 288 aa18.97■□□□□ 0.63
TRIM27-201ENST00000377194 RAD54LQ92698 747 aa18.97■□□□□ 0.63
TRIM27-201ENST00000377194 FAM212AQ96EL1 285 aa18.97■□□□□ 0.63
TRIM27-201ENST00000377194 CCDC17Q96LX7 622 aa18.97■□□□□ 0.63
TRIM27-201ENST00000377194 MMS19Q96T76 1030 aa18.97■□□□□ 0.63
TRIM27-201ENST00000377194 ATF5Q9Y2D1 282 aaPredicted RBP18.97■□□□□ 0.63
TRIM27-201ENST00000377194 ZC3H4Q9UPT8 1303 aaKnown RBP18.97■□□□□ 0.63
TRIM27-201ENST00000377194 NDUFA10O95299 355 aa18.97■□□□□ 0.63
TRIM27-201ENST00000377194 MYBL2P10244 700 aa18.97■□□□□ 0.63
TRIM27-201ENST00000377194 QRICH1Q2TAL8 776 aa18.97■□□□□ 0.63
TRIM27-201ENST00000377194 KRT79Q5XKE5 535 aa18.97■□□□□ 0.63
TRIM27-201ENST00000377194 UNC13DQ70J99 1090 aa18.97■□□□□ 0.63
TRIM27-201ENST00000377194 CERKLQ49MI3 558 aaPredicted RBP18.97■□□□□ 0.63
TRIM27-201ENST00000377194 TRAPPC11Q7Z392 1133 aa18.97■□□□□ 0.63
TRIM27-201ENST00000377194 C2CD5Q86YS7 1000 aa18.97■□□□□ 0.63
TRIM27-201ENST00000377194 ZSCAN29Q8IWY8 852 aaPredicted RBP18.97■□□□□ 0.63
TRIM27-201ENST00000377194 FAM76AQ8TAV0 307 aa18.97■□□□□ 0.63
TRIM27-201ENST00000377194 BCAS4Q8TDM0 211 aa18.97■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms