RNA–Protein interactions for RNA: ENST00000376709.8

VSX1-202, Transcript of visual system homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VSX1, Length 2,192 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-202ENST00000376709 TAL1P17542 331 aaPredicted RBP22.5■■□□□ 1.19
VSX1-202ENST00000376709 STAT3P40763 770 aa22.5■■□□□ 1.19
VSX1-202ENST00000376709 MAP3K9P80192 1104 aa22.5■■□□□ 1.19
VSX1-202ENST00000376709 CBX1P83916 185 aa22.5■■□□□ 1.19
VSX1-202ENST00000376709 EHHADHQ08426 723 aa22.5■■□□□ 1.19
VSX1-202ENST00000376709 COASYQ13057 564 aa22.5■■□□□ 1.19
VSX1-202ENST00000376709 MIIPQ5JXC2 388 aa22.5■■□□□ 1.19
VSX1-202ENST00000376709 HAUS3Q68CZ6 603 aa22.5■■□□□ 1.19
VSX1-202ENST00000376709 AGBL3Q8NEM8 1001 aa22.5■■□□□ 1.19
VSX1-202ENST00000376709 DNAJC19Q96DA6 116 aa22.5■■□□□ 1.19
VSX1-202ENST00000376709 CHP1Q99653 195 aa22.5■■□□□ 1.19
VSX1-202ENST00000376709 TMEM39BQ9GZU3 492 aa22.5■■□□□ 1.19
VSX1-202ENST00000376709 PANK4Q9NVE7 773 aa22.5■■□□□ 1.19
VSX1-202ENST00000376709 RETREG2Q8NC44 543 aa22.49■■□□□ 1.19
VSX1-202ENST00000376709 UBXN4Q92575 508 aa22.49■■□□□ 1.19
VSX1-202ENST00000376709 SLF1Q9BQI6 1058 aa22.49■■□□□ 1.19
VSX1-202ENST00000376709 GOPCQ9HD26 462 aa22.49■■□□□ 1.19
VSX1-202ENST00000376709 PLA2G4BP0C869 781 aa22.49■■□□□ 1.19
VSX1-202ENST00000376709 POLD1P28340 1107 aa22.49■■□□□ 1.19
VSX1-202ENST00000376709 HOXA13P31271 388 aaPredicted RBP22.49■■□□□ 1.19
VSX1-202ENST00000376709 SREBF1P36956 1147 aa22.49■■□□□ 1.19
VSX1-202ENST00000376709 LRRC41Q15345 812 aa22.49■■□□□ 1.19
VSX1-202ENST00000376709 FBXO38Q6PIJ6 1188 aa22.49■■□□□ 1.19
VSX1-202ENST00000376709 ETNPPLQ8TBG4 499 aa22.49■■□□□ 1.19
VSX1-202ENST00000376709 TSG101Q99816 390 aa22.49■■□□□ 1.19
VSX1-202ENST00000376709 MRFAP1Q9Y605 127 aa22.49■■□□□ 1.19
VSX1-202ENST00000376709 SLC26A4O43511 780 aa22.48■■□□□ 1.19
VSX1-202ENST00000376709 KLK7P49862 253 aa22.48■■□□□ 1.19
VSX1-202ENST00000376709 Q4G0T1 1027 aa22.48■■□□□ 1.19
VSX1-202ENST00000376709 MYOCDQ8IZQ8 938 aa22.48■■□□□ 1.19
VSX1-202ENST00000376709 GLIS3Q8NEA6 775 aa22.48■■□□□ 1.19
VSX1-202ENST00000376709 SHTN1A0MZ66 631 aa22.48■■□□□ 1.19
VSX1-202ENST00000376709 TBX3O15119 743 aa22.48■■□□□ 1.19
VSX1-202ENST00000376709 NDUFA10O95299 355 aa22.48■■□□□ 1.19
VSX1-202ENST00000376709 MMP14P50281 582 aa22.48■■□□□ 1.19
VSX1-202ENST00000376709 ZNF569Q5MCW4 686 aa22.48■■□□□ 1.19
VSX1-202ENST00000376709 FAM26FQ5R3K3 315 aa22.48■■□□□ 1.19
VSX1-202ENST00000376709 GPBP1Q86WP2 473 aa22.48■■□□□ 1.19
VSX1-202ENST00000376709 ERMNQ8TAM6 284 aa22.48■■□□□ 1.19
VSX1-202ENST00000376709 ACER1Q8TDN7 264 aa22.48■■□□□ 1.19
VSX1-202ENST00000376709 TAOK3Q9H2K8 898 aa22.48■■□□□ 1.19
VSX1-202ENST00000376709 AGPAT5Q9NUQ2 364 aa22.48■■□□□ 1.19
VSX1-202ENST00000376709 ZBTB21Q9ULJ3 1066 aa22.48■■□□□ 1.19
VSX1-202ENST00000376709 TMX2Q9Y320 296 aa22.48■■□□□ 1.19
VSX1-202ENST00000376709 EPN1Q9Y6I3 576 aaPredicted RBP22.48■■□□□ 1.19
VSX1-202ENST00000376709 FAM86B1E9PN63 330 aa22.47■■□□□ 1.19
VSX1-202ENST00000376709 FAM86B2P0C5J1 330 aa22.47■■□□□ 1.19
VSX1-202ENST00000376709 NCAPH2Q6IBW4 605 aa22.47■■□□□ 1.19
VSX1-202ENST00000376709 CCDC65Q8IXS2 484 aa22.47■■□□□ 1.19
VSX1-202ENST00000376709 ERGIC2Q96RQ1 377 aa22.47■■□□□ 1.19
VSX1-202ENST00000376709 TTYH3Q9C0H2 523 aa22.47■■□□□ 1.19
VSX1-202ENST00000376709 ZNHIT6Q9NWK9 470 aaKnown RBP22.47■■□□□ 1.19
VSX1-202ENST00000376709 POTEFA5A3E0 1075 aa22.46■■□□□ 1.19
VSX1-202ENST00000376709 EFCAB8A8MWE9 144 aa22.46■■□□□ 1.19
VSX1-202ENST00000376709 OPLAHO14841 1288 aa22.46■■□□□ 1.19
VSX1-202ENST00000376709 NKRFO15226 690 aaKnown RBP eCLIP22.46■■□□□ 1.19
VSX1-202ENST00000376709 MED24O75448 989 aa22.46■■□□□ 1.19
VSX1-202ENST00000376709 POTEIP0CG38 1075 aa22.46■■□□□ 1.19
VSX1-202ENST00000376709 VWA3BQ502W6 1294 aa22.46■■□□□ 1.19
VSX1-202ENST00000376709 FAM83BQ5T0W9 1011 aa22.46■■□□□ 1.19
VSX1-202ENST00000376709 POTEGQ6S5H5 508 aa22.46■■□□□ 1.19
VSX1-202ENST00000376709 POTEEQ6S8J3 1075 aa22.46■■□□□ 1.19
VSX1-202ENST00000376709 MTMR14Q8NCE2 650 aa22.46■■□□□ 1.19
VSX1-202ENST00000376709 TADA3O75528 432 aa22.46■■□□□ 1.19
VSX1-202ENST00000376709 KRT18P05783 430 aaKnown RBP22.46■■□□□ 1.19
VSX1-202ENST00000376709 ZNF76P36508 570 aa22.46■■□□□ 1.19
VSX1-202ENST00000376709 PPP2R3AQ06190 1150 aa22.46■■□□□ 1.19
VSX1-202ENST00000376709 SPIRE1Q08AE8 756 aa22.46■■□□□ 1.19
VSX1-202ENST00000376709 TRAF1Q13077 416 aa22.46■■□□□ 1.19
VSX1-202ENST00000376709 NBPF9Q3BBW0 867 aa22.46■■□□□ 1.19
VSX1-202ENST00000376709 KIAA1755Q5JYT7 1200 aa22.46■■□□□ 1.19
VSX1-202ENST00000376709 CIAPIN1Q6FI81 312 aa22.46■■□□□ 1.19
VSX1-202ENST00000376709 MIGA2Q7L4E1 593 aa22.46■■□□□ 1.19
VSX1-202ENST00000376709 LENG9Q96B70 501 aa22.46■■□□□ 1.19
VSX1-202ENST00000376709 MTFR1LQ9H019 292 aa22.46■■□□□ 1.19
VSX1-202ENST00000376709 NDST4Q9H3R1 872 aa22.46■■□□□ 1.19
VSX1-202ENST00000376709 TBC1D7Q9P0N9 293 aa22.46■■□□□ 1.19
VSX1-202ENST00000376709 FRMD4AQ9P2Q2 1039 aaPredicted RBP22.46■■□□□ 1.19
VSX1-202ENST00000376709 SMCHD1A6NHR9 2005 aa22.45■■□□□ 1.18
VSX1-202ENST00000376709 ZBED6P86452 979 aa22.45■■□□□ 1.18
VSX1-202ENST00000376709 MAN2A1Q16706 1144 aa22.45■■□□□ 1.18
VSX1-202ENST00000376709 WDR59Q6PJI9 974 aa22.45■■□□□ 1.18
VSX1-202ENST00000376709 FAM20AQ96MK3 541 aa22.45■■□□□ 1.18
VSX1-202ENST00000376709 SCAF8Q9UPN6 1271 aaKnown RBP22.45■■□□□ 1.18
VSX1-202ENST00000376709 ABCB11O95342 1321 aa22.45■■□□□ 1.18
VSX1-202ENST00000376709 NFKBIEO00221 500 aa22.45■■□□□ 1.18
VSX1-202ENST00000376709 PIK3CDO00329 1044 aa22.45■■□□□ 1.18
VSX1-202ENST00000376709 RAD51AP2Q09MP3 1159 aa22.45■■□□□ 1.18
VSX1-202ENST00000376709 FKBP1CQ5VVH2 108 aa22.45■■□□□ 1.18
VSX1-202ENST00000376709 LRRC55Q6ZSA7 311 aa22.45■■□□□ 1.18
VSX1-202ENST00000376709 CATSPER3Q86XQ3 398 aa22.45■■□□□ 1.18
VSX1-202ENST00000376709 FEZ1Q99689 392 aa22.45■■□□□ 1.18
VSX1-202ENST00000376709 NPHP3-ACAD11A0A0J9YXS1 232 aa22.44■■□□□ 1.18
VSX1-202ENST00000376709 RASSF10A6NK89 507 aa22.44■■□□□ 1.18
VSX1-202ENST00000376709 WNT10BO00744 389 aa22.44■■□□□ 1.18
VSX1-202ENST00000376709 CYP11B2P19099 503 aa22.44■■□□□ 1.18
VSX1-202ENST00000376709 CACNB1Q02641 598 aaPredicted RBP22.44■■□□□ 1.18
VSX1-202ENST00000376709 ZYXQ15942 572 aaKnown RBP22.44■■□□□ 1.18
VSX1-202ENST00000376709 MEA1Q16626 185 aa22.44■■□□□ 1.18
VSX1-202ENST00000376709 HERC4Q5GLZ8 1057 aaPredicted RBP22.44■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms