RNA–Protein interactions for RNA: ENST00000373548.7

HDAC1-201, Transcript of histone deacetylase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC1, Length 2,124 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-201ENST00000373548 STX10O60499 249 aa21.86■■□□□ 1.09
HDAC1-201ENST00000373548 PLA2G4BP0C869 781 aa21.86■■□□□ 1.09
HDAC1-201ENST00000373548 HAUS3Q68CZ6 603 aa21.86■■□□□ 1.09
HDAC1-201ENST00000373548 NCAPH2Q6IBW4 605 aa21.86■■□□□ 1.09
HDAC1-201ENST00000373548 CENPPQ6IPU0 288 aa21.86■■□□□ 1.09
HDAC1-201ENST00000373548 LPAR1Q92633 364 aa21.86■■□□□ 1.09
HDAC1-201ENST00000373548 VAV3Q9UKW4 847 aa21.86■■□□□ 1.09
HDAC1-201ENST00000373548 SSBP05455 408 aaKnown RBP eCLIP21.85■■□□□ 1.09
HDAC1-201ENST00000373548 DGKZQ13574 1117 aa21.85■■□□□ 1.09
HDAC1-201ENST00000373548 CATSPER3Q86XQ3 398 aa21.85■■□□□ 1.09
HDAC1-201ENST00000373548 PANX2Q96RD6 677 aa21.85■■□□□ 1.09
HDAC1-201ENST00000373548 POTEFA5A3E0 1075 aa21.85■■□□□ 1.09
HDAC1-201ENST00000373548 GYPCP04921 128 aa21.85■■□□□ 1.09
HDAC1-201ENST00000373548 ICAM1P05362 532 aa21.85■■□□□ 1.09
HDAC1-201ENST00000373548 POTEIP0CG38 1075 aa21.85■■□□□ 1.09
HDAC1-201ENST00000373548 PSMD2Q13200 908 aa21.85■■□□□ 1.09
HDAC1-201ENST00000373548 POTEGQ6S5H5 508 aa21.85■■□□□ 1.09
HDAC1-201ENST00000373548 POTEEQ6S8J3 1075 aa21.85■■□□□ 1.09
HDAC1-201ENST00000373548 GUF1Q8N442 669 aaKnown RBP21.85■■□□□ 1.09
HDAC1-201ENST00000373548 ERMNQ8TAM6 284 aa21.85■■□□□ 1.09
HDAC1-201ENST00000373548 CPLX3Q8WVH0 158 aa21.85■■□□□ 1.09
HDAC1-201ENST00000373548 AGBL1Q96MI9 1066 aa21.85■■□□□ 1.09
HDAC1-201ENST00000373548 SLF1Q9BQI6 1058 aa21.85■■□□□ 1.09
HDAC1-201ENST00000373548 WDR18Q9BV38 432 aa21.85■■□□□ 1.09
HDAC1-201ENST00000373548 MAGEC2Q9UBF1 373 aaPredicted RBP21.85■■□□□ 1.09
HDAC1-201ENST00000373548 LGALS16A8MUM7 142 aa21.84■■□□□ 1.09
HDAC1-201ENST00000373548 RIOK3O14730 519 aaKnown RBP21.84■■□□□ 1.09
HDAC1-201ENST00000373548 SPATA31C1P0DKV0 1188 aa21.84■■□□□ 1.09
HDAC1-201ENST00000373548 COASYQ13057 564 aa21.84■■□□□ 1.09
HDAC1-201ENST00000373548 PRPF38AQ8NAV1 312 aaKnown RBP21.84■■□□□ 1.09
HDAC1-201ENST00000373548 CCPG1Q9ULG6 757 aa21.84■■□□□ 1.09
HDAC1-201ENST00000373548 UTRNP46939 3433 aa21.84■■□□□ 1.09
HDAC1-201ENST00000373548 MFAP3LO75121 409 aa21.83■■□□□ 1.09
HDAC1-201ENST00000373548 RPA1P27694 616 aa21.83■■□□□ 1.09
HDAC1-201ENST00000373548 HOXA7P31268 230 aaPredicted RBP21.83■■□□□ 1.09
HDAC1-201ENST00000373548 CASP14P31944 242 aa21.83■■□□□ 1.09
HDAC1-201ENST00000373548 UBXN2AP68543 259 aa21.83■■□□□ 1.09
HDAC1-201ENST00000373548 UBXN1Q04323 297 aa21.83■■□□□ 1.09
HDAC1-201ENST00000373548 GPBP1Q86WP2 473 aa21.83■■□□□ 1.09
HDAC1-201ENST00000373548 EEF2KMTQ96G04 330 aa21.83■■□□□ 1.09
HDAC1-201ENST00000373548 PANK4Q9NVE7 773 aa21.83■■□□□ 1.09
HDAC1-201ENST00000373548 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP21.83■■□□□ 1.094e-8■■■□□ 16.3
HDAC1-201ENST00000373548 CYP11B2P19099 503 aa21.83■■□□□ 1.08
HDAC1-201ENST00000373548 FXR1P51114 621 aaKnown RBP eCLIP21.83■■□□□ 1.08
HDAC1-201ENST00000373548 GLIS3Q8NEA6 775 aa21.83■■□□□ 1.08
HDAC1-201ENST00000373548 ZNF507Q8TCN5 953 aa21.83■■□□□ 1.08
HDAC1-201ENST00000373548 BMP2KQ9NSY1 1161 aaPredicted RBP21.83■■□□□ 1.08
HDAC1-201ENST00000373548 PAXBP1Q9Y5B6 917 aa21.83■■□□□ 1.08
HDAC1-201ENST00000373548 CCP110O43303 1012 aa21.82■■□□□ 1.08
HDAC1-201ENST00000373548 GTF2F1P35269 517 aaKnown RBP eCLIP21.82■■□□□ 1.08
HDAC1-201ENST00000373548 SLC12A3P55017 1021 aa21.82■■□□□ 1.08
HDAC1-201ENST00000373548 MB21D1Q8N884 522 aa21.82■■□□□ 1.08
HDAC1-201ENST00000373548 ZNF592Q92610 1267 aa21.82■■□□□ 1.08
HDAC1-201ENST00000373548 CNOT6LQ96LI5 555 aaKnown RBP21.82■■□□□ 1.08
HDAC1-201ENST00000373548 EHMT1Q9H9B1 1298 aa21.82■■□□□ 1.08
HDAC1-201ENST00000373548 STK24Q9Y6E0 443 aa21.82■■□□□ 1.08
HDAC1-201ENST00000373548 DICER1Q9UPY3 1922 aaKnown RBP21.82■■□□□ 1.08
HDAC1-201ENST00000373548 PSMC6P62333 389 aa21.82■■□□□ 1.08
HDAC1-201ENST00000373548 MTMR2Q13614 643 aa21.82■■□□□ 1.08
HDAC1-201ENST00000373548 ANGEL2Q5VTE6 544 aaKnown RBP21.82■■□□□ 1.08
HDAC1-201ENST00000373548 DCAF15Q66K64 600 aa21.82■■□□□ 1.08
HDAC1-201ENST00000373548 FAM114A1Q8IWE2 563 aa21.82■■□□□ 1.08
HDAC1-201ENST00000373548 REXO1L1PQ8IX06 675 aa21.82■■□□□ 1.08
HDAC1-201ENST00000373548 HOOK2Q96ED9 719 aa21.82■■□□□ 1.08
HDAC1-201ENST00000373548 TUBGCP2Q9BSJ2 902 aa21.82■■□□□ 1.08
HDAC1-201ENST00000373548 RBBP6Q7Z6E9 1792 aaKnown RBP21.81■■□□□ 1.08
HDAC1-201ENST00000373548 NPHP3-ACAD11A0A0J9YXS1 232 aa21.81■■□□□ 1.08
HDAC1-201ENST00000373548 KIF2AO00139 706 aaPredicted RBP21.81■■□□□ 1.08
HDAC1-201ENST00000373548 EML1O00423 815 aa21.81■■□□□ 1.08
HDAC1-201ENST00000373548 HSD17B4P51659 736 aa21.81■■□□□ 1.08
HDAC1-201ENST00000373548 LRRC41Q15345 812 aa21.81■■□□□ 1.08
HDAC1-201ENST00000373548 CNGA4Q8IV77 575 aa21.81■■□□□ 1.08
HDAC1-201ENST00000373548 TRPM4Q8TD43 1214 aa21.81■■□□□ 1.08
HDAC1-201ENST00000373548 EMILIN3Q9NT22 766 aa21.81■■□□□ 1.08
HDAC1-201ENST00000373548 PARP14Q460N5 1801 aa21.81■■□□□ 1.08
HDAC1-201ENST00000373548 MEIS1O00470 390 aa21.8■■□□□ 1.08
HDAC1-201ENST00000373548 DYNC1I1O14576 645 aa21.8■■□□□ 1.08
HDAC1-201ENST00000373548 VCAM1P19320 739 aa21.8■■□□□ 1.08
HDAC1-201ENST00000373548 ARSHQ5FYA8 562 aa21.8■■□□□ 1.08
HDAC1-201ENST00000373548 FAM26FQ5R3K3 315 aa21.8■■□□□ 1.08
HDAC1-201ENST00000373548 CLEC4DQ8WXI8 215 aa21.8■■□□□ 1.08
HDAC1-201ENST00000373548 SLC5A5Q92911 643 aa21.8■■□□□ 1.08
HDAC1-201ENST00000373548 TANGO6Q9C0B7 1094 aa21.8■■□□□ 1.08
HDAC1-201ENST00000373548 ZNF112Q9UJU3 913 aa21.8■■□□□ 1.08
HDAC1-201ENST00000373548 PPP2R2CQ9Y2T4 447 aa21.8■■□□□ 1.08
HDAC1-201ENST00000373548 A0A1W2PQC6 194 aa21.8■■□□□ 1.08
HDAC1-201ENST00000373548 RNF225M0QZC1 329 aaPredicted RBP21.8■■□□□ 1.08
HDAC1-201ENST00000373548 PSMD10O75832 226 aa21.8■■□□□ 1.08
HDAC1-201ENST00000373548 TRIM14Q14142 442 aa21.8■■□□□ 1.08
HDAC1-201ENST00000373548 CEP55Q53EZ4 464 aa21.8■■□□□ 1.08
HDAC1-201ENST00000373548 PRAMEF18Q5VWM3 479 aa21.8■■□□□ 1.08
HDAC1-201ENST00000373548 SLC30A10Q6XR72 485 aa21.8■■□□□ 1.08
HDAC1-201ENST00000373548 TOGARAM2Q6ZUX3 1019 aa21.8■■□□□ 1.08
HDAC1-201ENST00000373548 APOBEC3FQ8IUX4 373 aaKnown RBP21.8■■□□□ 1.08
HDAC1-201ENST00000373548 CCDC65Q8IXS2 484 aa21.8■■□□□ 1.08
HDAC1-201ENST00000373548 CCDC51Q96ER9 411 aa21.8■■□□□ 1.08
HDAC1-201ENST00000373548 POLR3CQ9BUI4 534 aaPredicted RBP21.8■■□□□ 1.08
HDAC1-201ENST00000373548 NFIBO00712 420 aa21.79■■□□□ 1.08
HDAC1-201ENST00000373548 TPM1P09493 284 aa21.79■■□□□ 1.08
HDAC1-201ENST00000373548 PRKCSHP14314 528 aaPredicted RBP21.79■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms