RNA–Protein interactions for RNA: ENST00000373316.4

PGK1-201, Transcript of phosphoglycerate kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PGK1, Length 4,887 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGK1-201ENST00000373316 DAAM2Q86T65 1068 aa11.6□□□□□ -0.55
PGK1-201ENST00000373316 RNF10Q8N5U6 811 aaKnown RBP11.6□□□□□ -0.55
PGK1-201ENST00000373316 DCAF4Q8WV16 495 aa11.6□□□□□ -0.55
PGK1-201ENST00000373316 KANSL2Q9H9L4 492 aa11.6□□□□□ -0.55
PGK1-201ENST00000373316 TRPC6Q9Y210 931 aa11.6□□□□□ -0.55
PGK1-201ENST00000373316 THSD7AQ9UPZ6 1657 aa11.59□□□□□ -0.55
PGK1-201ENST00000373316 AFPP02771 609 aaKnown RBP11.59□□□□□ -0.55
PGK1-201ENST00000373316 TROVE2P10155 538 aaKnown RBP eCLIP11.59□□□□□ -0.55
PGK1-201ENST00000373316 ADKP55263 362 aaKnown RBP11.59□□□□□ -0.55
PGK1-201ENST00000373316 SLMAPQ14BN4 828 aa11.59□□□□□ -0.55
PGK1-201ENST00000373316 GRIK5Q16478 980 aa11.59□□□□□ -0.55
PGK1-201ENST00000373316 CCDC62Q6P9F0 684 aa11.59□□□□□ -0.55
PGK1-201ENST00000373316 FAM160B2Q86V87 743 aa11.59□□□□□ -0.55
PGK1-201ENST00000373316 CSRNP1Q96S65 589 aa11.59□□□□□ -0.55
PGK1-201ENST00000373316 TMEM110-MUSTN1A8MSY1 372 aa11.59□□□□□ -0.55
PGK1-201ENST00000373316 RGS16O15492 202 aaPredicted RBP11.59□□□□□ -0.55
PGK1-201ENST00000373316 PDZD4Q76G19 769 aaPredicted RBP11.59□□□□□ -0.55
PGK1-201ENST00000373316 MB21D2Q8IYB1 491 aaPredicted RBP11.59□□□□□ -0.55
PGK1-201ENST00000373316 HACE1Q8IYU2 909 aa11.59□□□□□ -0.55
PGK1-201ENST00000373316 IPO4Q8TEX9 1081 aaKnown RBP11.59□□□□□ -0.55
PGK1-201ENST00000373316 STRBPQ96SI9 672 aaKnown RBP11.59□□□□□ -0.55
PGK1-201ENST00000373316 VCXQ9H320 206 aa11.59□□□□□ -0.55
PGK1-201ENST00000373316 USP40Q9NVE5 1235 aa11.59□□□□□ -0.55
PGK1-201ENST00000373316 PYCARDQ9ULZ3 195 aa11.59□□□□□ -0.55
PGK1-201ENST00000373316 ZDHHC9Q9Y397 364 aa11.59□□□□□ -0.55
PGK1-201ENST00000373316 I3L4J1 428 aa11.59□□□□□ -0.55
PGK1-201ENST00000373316 RGL2O15211 777 aa11.59□□□□□ -0.55
PGK1-201ENST00000373316 ST3GAL1Q11201 340 aa11.59□□□□□ -0.55
PGK1-201ENST00000373316 TTLL12Q14166 644 aaPredicted RBP11.59□□□□□ -0.55
PGK1-201ENST00000373316 GADD45GIP1Q8TAE8 222 aaPredicted RBP11.59□□□□□ -0.55
PGK1-201ENST00000373316 PPP1R12CQ9BZL4 782 aa11.59□□□□□ -0.55
PGK1-201ENST00000373316 ITIH6Q6UXX5 1313 aa11.59□□□□□ -0.55
PGK1-201ENST00000373316 ORC4O43929 436 aa11.59□□□□□ -0.55
PGK1-201ENST00000373316 PDE6CP51160 858 aa11.59□□□□□ -0.55
PGK1-201ENST00000373316 USP14P54578 494 aa11.59□□□□□ -0.55
PGK1-201ENST00000373316 DYNLL1P63167 89 aaKnown RBP11.59□□□□□ -0.55
PGK1-201ENST00000373316 PABPC4Q13310 644 aaKnown RBP eCLIP11.59□□□□□ -0.556e-11■■□□□ 13.3
PGK1-201ENST00000373316 GKAP1Q5VSY0 366 aaPredicted RBP11.59□□□□□ -0.55
PGK1-201ENST00000373316 ATP2A3Q93084 1043 aa11.59□□□□□ -0.55
PGK1-201ENST00000373316 MYL10Q9BUA6 226 aa11.59□□□□□ -0.55
PGK1-201ENST00000373316 AZI2Q9H6S1 392 aa11.59□□□□□ -0.55
PGK1-201ENST00000373316 CENPFP49454 3210 aa11.59□□□□□ -0.55
PGK1-201ENST00000373316 LUC7L3O95232 432 aaKnown RBP11.58□□□□□ -0.56
PGK1-201ENST00000373316 VIMP08670 466 aaKnown RBP11.58□□□□□ -0.56
PGK1-201ENST00000373316 BTDP43251 543 aa11.58□□□□□ -0.56
PGK1-201ENST00000373316 MFSD14BQ5SR56 506 aa11.58□□□□□ -0.56
PGK1-201ENST00000373316 FMR1NBQ8N0W7 255 aaPredicted RBP11.58□□□□□ -0.56
PGK1-201ENST00000373316 CACTINQ8WUQ7 758 aaKnown RBP11.58□□□□□ -0.56
PGK1-201ENST00000373316 RAB20Q9NX57 234 aa11.58□□□□□ -0.56
PGK1-201ENST00000373316 MFAP3LO75121 409 aa11.58□□□□□ -0.56
PGK1-201ENST00000373316 FGFR2P21802 821 aa11.58□□□□□ -0.56
PGK1-201ENST00000373316 TM4SF1P30408 202 aa11.58□□□□□ -0.56
PGK1-201ENST00000373316 ADAM9Q13443 819 aa11.58□□□□□ -0.56
PGK1-201ENST00000373316 KCNB1Q14721 858 aa11.58□□□□□ -0.56
PGK1-201ENST00000373316 EXOC3L4Q17RC7 722 aa11.58□□□□□ -0.56
PGK1-201ENST00000373316 HHATQ5VTY9 493 aa11.58□□□□□ -0.56
PGK1-201ENST00000373316 C11orf57Q6ZUT1 292 aaPredicted RBP11.58□□□□□ -0.56
PGK1-201ENST00000373316 TMTC3Q6ZXV5 915 aa11.58□□□□□ -0.56
PGK1-201ENST00000373316 MAPKAPK5Q8IW41 473 aa11.58□□□□□ -0.56
PGK1-201ENST00000373316 NACC1Q96RE7 527 aa11.58□□□□□ -0.56
PGK1-201ENST00000373316 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.58□□□□□ -0.56
PGK1-201ENST00000373316 ASIC3Q9UHC3 531 aa11.58□□□□□ -0.56
PGK1-201ENST00000373316 KRIT1O00522 736 aa11.58□□□□□ -0.56
PGK1-201ENST00000373316 CTNNA1P35221 906 aaKnown RBP11.58□□□□□ -0.56
PGK1-201ENST00000373316 CCDC105Q8IYK2 499 aa11.58□□□□□ -0.56
PGK1-201ENST00000373316 TRMT44Q8IYL2 757 aaKnown RBP11.58□□□□□ -0.56
PGK1-201ENST00000373316 PAGE5Q96GU1 130 aa11.58□□□□□ -0.56
PGK1-201ENST00000373316 C1orf112Q9NSG2 853 aa11.58□□□□□ -0.56
PGK1-201ENST00000373316 TARSL2A2RTX5 802 aaKnown RBP11.58□□□□□ -0.56
PGK1-201ENST00000373316 F8W031 263 aaPredicted RBP11.58□□□□□ -0.56
PGK1-201ENST00000373316 GFPT2O94808 682 aa11.58□□□□□ -0.56
PGK1-201ENST00000373316 SCP2P22307 547 aa11.58□□□□□ -0.56
PGK1-201ENST00000373316 SMARCA1P28370 1054 aa11.58□□□□□ -0.56
PGK1-201ENST00000373316 PRDX5P30044 214 aa11.58□□□□□ -0.56
PGK1-201ENST00000373316 MAP7D1Q3KQU3 841 aa11.58□□□□□ -0.56
PGK1-201ENST00000373316 DPCR1Q3MIW9 517 aa11.58□□□□□ -0.56
PGK1-201ENST00000373316 ZBTB8OSQ8IWT0 167 aa11.58□□□□□ -0.56
PGK1-201ENST00000373316 BLZF1Q9H2G9 400 aa11.58□□□□□ -0.56
PGK1-201ENST00000373316 SENP2Q9HC62 589 aa11.58□□□□□ -0.56
PGK1-201ENST00000373316 ATF7P17544 494 aaPredicted RBP11.57□□□□□ -0.56
PGK1-201ENST00000373316 ITIH3Q06033 890 aa11.57□□□□□ -0.56
PGK1-201ENST00000373316 ACCSQ96QU6 501 aa11.57□□□□□ -0.56
PGK1-201ENST00000373316 DDX41Q9UJV9 622 aaKnown RBP11.57□□□□□ -0.56
PGK1-201ENST00000373316 KRT71Q3SY84 523 aa11.57□□□□□ -0.56
PGK1-201ENST00000373316 SH2D4BQ5SQS7 431 aa11.57□□□□□ -0.56
PGK1-201ENST00000373316 UNC13DQ70J99 1090 aa11.57□□□□□ -0.56
PGK1-201ENST00000373316 FOXP4Q8IVH2 680 aaPredicted RBP11.57□□□□□ -0.56
PGK1-201ENST00000373316 RHOT2Q8IXI1 618 aa11.57□□□□□ -0.56
PGK1-201ENST00000373316 LCORLQ8N3X6 602 aa11.57□□□□□ -0.56
PGK1-201ENST00000373316 PPP1R1BQ9UD71 204 aaPredicted RBP11.57□□□□□ -0.56
PGK1-201ENST00000373316 MIF4GDA9UHW6 222 aaKnown RBP11.57□□□□□ -0.56
PGK1-201ENST00000373316 PGRMC1O00264 195 aaKnown RBP11.57□□□□□ -0.56
PGK1-201ENST00000373316 MMP10P09238 476 aa11.57□□□□□ -0.56
PGK1-201ENST00000373316 CASP14P31944 242 aa11.57□□□□□ -0.56
PGK1-201ENST00000373316 CAV1Q03135 178 aa11.57□□□□□ -0.56
PGK1-201ENST00000373316 DLGAP5Q15398 846 aa11.57□□□□□ -0.56
PGK1-201ENST00000373316 PFKFB3Q16875 520 aaPredicted RBP11.57□□□□□ -0.56
PGK1-201ENST00000373316 TCP11X2Q5H9J9 407 aa11.57□□□□□ -0.56
PGK1-201ENST00000373316 FAM84BQ96KN1 310 aaPredicted RBP11.57□□□□□ -0.56
PGK1-201ENST00000373316 PLIN2Q99541 437 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms