RNA–Protein interactions for RNA: ENST00000372190.7

RAPGEF1-202, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene RAPGEF1, Length 6,045 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-202ENST00000372190 NLRP12P59046 1061 aa15.26■□□□□ 0.03
RAPGEF1-202ENST00000372190 ANO1Q5XXA6 986 aa15.26■□□□□ 0.03
RAPGEF1-202ENST00000372190 CNNM4Q6P4Q7 775 aa15.26■□□□□ 0.03
RAPGEF1-202ENST00000372190 CALR3Q96L12 384 aaKnown RBP15.26■□□□□ 0.03
RAPGEF1-202ENST00000372190 VPS54Q9P1Q0 977 aa15.26■□□□□ 0.03
RAPGEF1-202ENST00000372190 PALD1Q9ULE6 856 aa15.26■□□□□ 0.03
RAPGEF1-202ENST00000372190 KLRF2D3W0D1 207 aa15.26■□□□□ 0.03
RAPGEF1-202ENST00000372190 PPP1R2P41236 205 aa15.26■□□□□ 0.03
RAPGEF1-202ENST00000372190 DYNLL1P63167 89 aaKnown RBP15.26■□□□□ 0.03
RAPGEF1-202ENST00000372190 ZNF513Q8N8E2 541 aaPredicted RBP15.26■□□□□ 0.03
RAPGEF1-202ENST00000372190 NOC4LQ9BVI4 516 aaKnown RBP15.26■□□□□ 0.03
RAPGEF1-202ENST00000372190 PTCH1Q13635 1447 aa15.26■□□□□ 0.03
RAPGEF1-202ENST00000372190 GADD45BO75293 160 aaPredicted RBP15.26■□□□□ 0.03
RAPGEF1-202ENST00000372190 HDAC4P56524 1084 aa15.26■□□□□ 0.03
RAPGEF1-202ENST00000372190 PNMA3Q9UL41 463 aa15.26■□□□□ 0.03
RAPGEF1-202ENST00000372190 TNKSO95271 1327 aa15.26■□□□□ 0.03
RAPGEF1-202ENST00000372190 IQCA1LA6NCM1 817 aa15.26■□□□□ 0.03
RAPGEF1-202ENST00000372190 H0YC42 278 aa15.26■□□□□ 0.03
RAPGEF1-202ENST00000372190 GNGT2O14610 69 aa15.26■□□□□ 0.03
RAPGEF1-202ENST00000372190 TTLL1O95922 423 aa15.26■□□□□ 0.03
RAPGEF1-202ENST00000372190 PCP11498 1178 aaKnown RBP15.26■□□□□ 0.03
RAPGEF1-202ENST00000372190 LRRC8CQ8TDW0 803 aa15.26■□□□□ 0.03
RAPGEF1-202ENST00000372190 PI4KBQ9UBF8 816 aa15.26■□□□□ 0.03
RAPGEF1-202ENST00000372190 KCNJ14Q9UNX9 436 aa15.26■□□□□ 0.03
RAPGEF1-202ENST00000372190 FMNL1O95466 1100 aaPredicted RBP15.25■□□□□ 0.03
RAPGEF1-202ENST00000372190 SH3GL1Q99961 368 aa15.25■□□□□ 0.03
RAPGEF1-202ENST00000372190 MRPS26Q9BYN8 205 aaKnown RBP15.25■□□□□ 0.03
RAPGEF1-202ENST00000372190 NBPF9Q3BBW0 867 aa15.25■□□□□ 0.03
RAPGEF1-202ENST00000372190 OPTNQ96CV9 577 aa15.25■□□□□ 0.03
RAPGEF1-202ENST00000372190 VPS37BQ9H9H4 285 aa15.25■□□□□ 0.03
RAPGEF1-202ENST00000372190 KCNG1Q9UIX4 513 aa15.25■□□□□ 0.03
RAPGEF1-202ENST00000372190 TLK1Q9UKI8 766 aa15.25■□□□□ 0.03
RAPGEF1-202ENST00000372190 ARHGAP6O43182 974 aa15.25■□□□□ 0.03
RAPGEF1-202ENST00000372190 TRIM58Q8NG06 486 aa15.25■□□□□ 0.03
RAPGEF1-202ENST00000372190 KCNH3Q9ULD8 1083 aa15.25■□□□□ 0.03
RAPGEF1-202ENST00000372190 SYNRGQ9UMZ2 1314 aa15.25■□□□□ 0.03
RAPGEF1-202ENST00000372190 SLC30A9Q6PML9 568 aa15.25■□□□□ 0.03
RAPGEF1-202ENST00000372190 DEPTORQ8TB45 409 aa15.25■□□□□ 0.03
RAPGEF1-202ENST00000372190 DYDC2Q96IM9 177 aa15.25■□□□□ 0.03
RAPGEF1-202ENST00000372190 MYO1CO00159 1063 aa15.25■□□□□ 0.03
RAPGEF1-202ENST00000372190 HSPD1P10809 573 aaKnown RBP15.25■□□□□ 0.03
RAPGEF1-202ENST00000372190 FAM160B1Q5W0V3 765 aa15.25■□□□□ 0.03
RAPGEF1-202ENST00000372190 TADA2BQ86TJ2 420 aa15.25■□□□□ 0.03
RAPGEF1-202ENST00000372190 SREK1IP1Q8N9Q2 155 aaPredicted RBP15.25■□□□□ 0.03
RAPGEF1-202ENST00000372190 RNF34Q969K3 372 aa15.25■□□□□ 0.03
RAPGEF1-202ENST00000372190 MED23Q9ULK4 1368 aa15.24■□□□□ 0.03
RAPGEF1-202ENST00000372190 DDAH1O94760 285 aa15.24■□□□□ 0.03
RAPGEF1-202ENST00000372190 DAB2P98082 770 aa15.24■□□□□ 0.03
RAPGEF1-202ENST00000372190 POLA2Q14181 598 aa15.24■□□□□ 0.03
RAPGEF1-202ENST00000372190 ZC3H18Q86VM9 953 aaKnown RBP15.24■□□□□ 0.03
RAPGEF1-202ENST00000372190 MAIP1Q8WWC4 291 aa15.24■□□□□ 0.03
RAPGEF1-202ENST00000372190 FAM193BQ96PV7 902 aaPredicted RBP15.24■□□□□ 0.03
RAPGEF1-202ENST00000372190 CAPN11Q9UMQ6 739 aa15.24■□□□□ 0.03
RAPGEF1-202ENST00000372190 CROCC2H7BZ55 1655 aa15.24■□□□□ 0.03
RAPGEF1-202ENST00000372190 MAN1A1P33908 653 aa15.24■□□□□ 0.03
RAPGEF1-202ENST00000372190 RNASE9P60153 205 aaKnown RBP15.24■□□□□ 0.03
RAPGEF1-202ENST00000372190 TMTC3Q6ZXV5 915 aa15.24■□□□□ 0.03
RAPGEF1-202ENST00000372190 EXOC4Q96A65 974 aa15.24■□□□□ 0.03
RAPGEF1-202ENST00000372190 NACA2Q9H009 215 aa15.24■□□□□ 0.03
RAPGEF1-202ENST00000372190 ADD3Q9UEY8 706 aaKnown RBP15.24■□□□□ 0.03
RAPGEF1-202ENST00000372190 A0A0D9SFI3 127 aa15.24■□□□□ 0.03
RAPGEF1-202ENST00000372190 DNAJC6O75061 913 aa15.24■□□□□ 0.03
RAPGEF1-202ENST00000372190 TBC1D8O95759 1140 aa15.24■□□□□ 0.03
RAPGEF1-202ENST00000372190 ZNF710Q8N1W2 664 aa15.24■□□□□ 0.03
RAPGEF1-202ENST00000372190 VPS16Q9H269 839 aa15.24■□□□□ 0.03
RAPGEF1-202ENST00000372190 CXorf56Q9H5V9 222 aa15.24■□□□□ 0.03
RAPGEF1-202ENST00000372190 KANSL2Q9H9L4 492 aa15.24■□□□□ 0.03
RAPGEF1-202ENST00000372190 SERPINB13Q9UIV8 391 aa15.24■□□□□ 0.03
RAPGEF1-202ENST00000372190 KRT14P02533 472 aa15.24■□□□□ 0.03
RAPGEF1-202ENST00000372190 RAPGEF1Q13905 1077 aa15.24■□□□□ 0.03
RAPGEF1-202ENST00000372190 C6orf118Q5T5N4 469 aa15.24■□□□□ 0.03
RAPGEF1-202ENST00000372190 SYCE1Q8N0S2 351 aa15.24■□□□□ 0.03
RAPGEF1-202ENST00000372190 STX10O60499 249 aa15.23■□□□□ 0.03
RAPGEF1-202ENST00000372190 KRT19P08727 400 aa15.23■□□□□ 0.03
RAPGEF1-202ENST00000372190 FAM102BQ5T8I3 360 aa15.23■□□□□ 0.03
RAPGEF1-202ENST00000372190 TEX9Q8N6V9 391 aa15.23■□□□□ 0.03
RAPGEF1-202ENST00000372190 TTLL11Q8NHH1 800 aa15.23■□□□□ 0.03
RAPGEF1-202ENST00000372190 DEAF1O75398 565 aaPredicted RBP15.23■□□□□ 0.03
RAPGEF1-202ENST00000372190 HIBCHQ6NVY1 386 aaPredicted RBP15.23■□□□□ 0.03
RAPGEF1-202ENST00000372190 TMTC1Q8IUR5 882 aa15.23■□□□□ 0.03
RAPGEF1-202ENST00000372190 AGLP35573 1532 aa15.23■□□□□ 0.03
RAPGEF1-202ENST00000372190 IGBP1P78318 339 aa15.23■□□□□ 0.03
RAPGEF1-202ENST00000372190 KRT40Q6A162 431 aa15.23■□□□□ 0.03
RAPGEF1-202ENST00000372190 TEKT3Q9BXF9 490 aa15.23■□□□□ 0.03
RAPGEF1-202ENST00000372190 C10orf88Q9H8K7 445 aa15.23■□□□□ 0.03
RAPGEF1-202ENST00000372190 PDE11AQ9HCR9 933 aa15.23■□□□□ 0.03
RAPGEF1-202ENST00000372190 NBPF26B4DH59 902 aa15.23■□□□□ 0.03
RAPGEF1-202ENST00000372190 LMNB1P20700 586 aa15.23■□□□□ 0.03
RAPGEF1-202ENST00000372190 DDIT3P35638 169 aa15.23■□□□□ 0.03
RAPGEF1-202ENST00000372190 ST13P50502 369 aaKnown RBP15.23■□□□□ 0.03
RAPGEF1-202ENST00000372190 ZBTB8OSQ8IWT0 167 aa15.23■□□□□ 0.03
RAPGEF1-202ENST00000372190 NBPF15Q8N660 670 aa15.23■□□□□ 0.03
RAPGEF1-202ENST00000372190 TRAF7Q6Q0C0 670 aa15.23■□□□□ 0.03
RAPGEF1-202ENST00000372190 RINLQ6ZS11 566 aa15.23■□□□□ 0.03
RAPGEF1-202ENST00000372190 BARGINQ6ZT62 677 aa15.23■□□□□ 0.03
RAPGEF1-202ENST00000372190 CABP7Q86V35 215 aa15.23■□□□□ 0.03
RAPGEF1-202ENST00000372190 APOBEC3FQ8IUX4 373 aaKnown RBP15.23■□□□□ 0.03
RAPGEF1-202ENST00000372190 CMTR1Q8N1G2 835 aaKnown RBP15.23■□□□□ 0.03
RAPGEF1-202ENST00000372190 ABCA6Q8N139 1617 aa15.22■□□□□ 0.03
RAPGEF1-202ENST00000372190 CUTAO60888 179 aa15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms