RNA–Protein interactions for RNA: ENST00000372067.7

VEGFA-205, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 3,535 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-205ENST00000372067 ARID5AQ03989 594 aa18.92■□□□□ 0.62
VEGFA-205ENST00000372067 DACT2Q5SW24 774 aa18.92■□□□□ 0.62
VEGFA-205ENST00000372067 CCDC122Q5T0U0 273 aa18.92■□□□□ 0.62
VEGFA-205ENST00000372067 SWT1Q5T5J6 900 aaKnown RBP18.92■□□□□ 0.62
VEGFA-205ENST00000372067 POTEBQ6S5H4 581 aa18.92■□□□□ 0.62
VEGFA-205ENST00000372067 THAP9Q9H5L6 903 aa18.92■□□□□ 0.62
VEGFA-205ENST00000372067 PANK4Q9NVE7 773 aa18.92■□□□□ 0.62
VEGFA-205ENST00000372067 FAM198AQ9UFP1 575 aa18.92■□□□□ 0.62
VEGFA-205ENST00000372067 OAS2P29728 719 aaKnown RBP18.92■□□□□ 0.62
VEGFA-205ENST00000372067 SPA17Q15506 151 aa18.92■□□□□ 0.62
VEGFA-205ENST00000372067 STK17AQ9UEE5 414 aa18.92■□□□□ 0.62
VEGFA-205ENST00000372067 EPN1Q9Y6I3 576 aaPredicted RBP18.92■□□□□ 0.62
VEGFA-205ENST00000372067 KLRC4O43908 158 aa18.92■□□□□ 0.62
VEGFA-205ENST00000372067 MAP2K1Q02750 393 aaPredicted RBP18.92■□□□□ 0.62
VEGFA-205ENST00000372067 PABPC4Q13310 644 aaKnown RBP eCLIP18.92■□□□□ 0.625e-10■■■■■ 60.6
VEGFA-205ENST00000372067 SYDE2Q5VT97 1194 aa18.92■□□□□ 0.62
VEGFA-205ENST00000372067 TRIM65Q6PJ69 517 aa18.92■□□□□ 0.62
VEGFA-205ENST00000372067 CCDC91Q7Z6B0 441 aa18.92■□□□□ 0.62
VEGFA-205ENST00000372067 GOLGA6L1Q8N7Z2 621 aa18.92■□□□□ 0.62
VEGFA-205ENST00000372067 AKT1S1Q96B36 256 aa18.92■□□□□ 0.62
VEGFA-205ENST00000372067 KLRG2A4D1S0 409 aaPredicted RBP18.91■□□□□ 0.62
VEGFA-205ENST00000372067 KIF1CO43896 1103 aaKnown RBP18.91■□□□□ 0.62
VEGFA-205ENST00000372067 CCDC65Q8IXS2 484 aa18.91■□□□□ 0.62
VEGFA-205ENST00000372067 ERMNQ8TAM6 284 aa18.91■□□□□ 0.62
VEGFA-205ENST00000372067 LRRC15Q8TF66 581 aa18.91■□□□□ 0.62
VEGFA-205ENST00000372067 RAD54LQ92698 747 aa18.91■□□□□ 0.62
VEGFA-205ENST00000372067 ARHGEF10LQ9HCE6 1279 aa18.91■□□□□ 0.62
VEGFA-205ENST00000372067 NPHP3-ACAD11A0A0J9YXS1 232 aa18.91■□□□□ 0.62
VEGFA-205ENST00000372067 EIF3CLB5ME19 914 aaKnown RBP18.91■□□□□ 0.62
VEGFA-205ENST00000372067 PLSCR1O15162 318 aa18.91■□□□□ 0.62
VEGFA-205ENST00000372067 AKR1B10O60218 316 aa18.91■□□□□ 0.62
VEGFA-205ENST00000372067 CCDC84Q86UT8 332 aaPredicted RBP18.91■□□□□ 0.62
VEGFA-205ENST00000372067 EIF3CQ99613 913 aaKnown RBP18.91■□□□□ 0.62
VEGFA-205ENST00000372067 TFR2Q9UP52 801 aa18.91■□□□□ 0.62
VEGFA-205ENST00000372067 MACROD2A1Z1Q3 448 aa18.91■□□□□ 0.62
VEGFA-205ENST00000372067 RNF225M0QZC1 329 aaPredicted RBP18.91■□□□□ 0.62
VEGFA-205ENST00000372067 CYLC1P35663 651 aaPredicted RBP18.91■□□□□ 0.62
VEGFA-205ENST00000372067 DNA2P51530 1060 aa18.91■□□□□ 0.62
VEGFA-205ENST00000372067 FAM26FQ5R3K3 315 aa18.91■□□□□ 0.62
VEGFA-205ENST00000372067 TCERG1LQ5VWI1 586 aa18.91■□□□□ 0.62
VEGFA-205ENST00000372067 SUGP1Q8IWZ8 645 aaKnown RBP18.91■□□□□ 0.62
VEGFA-205ENST00000372067 MYOCDQ8IZQ8 938 aa18.91■□□□□ 0.62
VEGFA-205ENST00000372067 CCDC42Q96M95 316 aa18.91■□□□□ 0.62
VEGFA-205ENST00000372067 C7orf25Q9BPX7 421 aa18.91■□□□□ 0.62
VEGFA-205ENST00000372067 CRACR2AQ9BSW2 395 aa18.91■□□□□ 0.62
VEGFA-205ENST00000372067 MMTAG2Q9BU76 263 aaKnown RBP18.91■□□□□ 0.62
VEGFA-205ENST00000372067 UNC13DQ70J99 1090 aa18.9■□□□□ 0.62
VEGFA-205ENST00000372067 KCNK18Q7Z418 384 aa18.9■□□□□ 0.62
VEGFA-205ENST00000372067 SUPT20HQ8NEM7 779 aa18.9■□□□□ 0.62
VEGFA-205ENST00000372067 DNAJC18Q9H819 358 aa18.9■□□□□ 0.62
VEGFA-205ENST00000372067 NLRC4Q9NPP4 1024 aa18.9■□□□□ 0.62
VEGFA-205ENST00000372067 EP400Q96L91 3159 aa18.9■□□□□ 0.62
VEGFA-205ENST00000372067 APTXQ7Z2E3 356 aaKnown RBP18.9■□□□□ 0.62
VEGFA-205ENST00000372067 DCAF4Q8WV16 495 aa18.9■□□□□ 0.62
VEGFA-205ENST00000372067 CAPZA3Q96KX2 299 aa18.9■□□□□ 0.62
VEGFA-205ENST00000372067 PNMA5Q96PV4 448 aa18.9■□□□□ 0.62
VEGFA-205ENST00000372067 RHOXF2BP0C7M4 288 aa18.9■□□□□ 0.62
VEGFA-205ENST00000372067 ARHGAP4P98171 946 aa18.9■□□□□ 0.62
VEGFA-205ENST00000372067 TTI2Q6NXR4 508 aa18.9■□□□□ 0.62
VEGFA-205ENST00000372067 RHOXF2Q9BQY4 288 aa18.9■□□□□ 0.62
VEGFA-205ENST00000372067 AGPAT5Q9NUQ2 364 aa18.9■□□□□ 0.62
VEGFA-205ENST00000372067 POTEFA5A3E0 1075 aa18.89■□□□□ 0.61
VEGFA-205ENST00000372067 POTEIP0CG38 1075 aa18.89■□□□□ 0.61
VEGFA-205ENST00000372067 ERVK-24P63145 666 aa18.89■□□□□ 0.61
VEGFA-205ENST00000372067 CYP27A1Q02318 531 aa18.89■□□□□ 0.61
VEGFA-205ENST00000372067 POTEGQ6S5H5 508 aa18.89■□□□□ 0.61
VEGFA-205ENST00000372067 POTEEQ6S8J3 1075 aa18.89■□□□□ 0.61
VEGFA-205ENST00000372067 GLT8D2Q9H1C3 349 aa18.89■□□□□ 0.61
VEGFA-205ENST00000372067 PLA2G4BP0C869 781 aa18.89■□□□□ 0.61
VEGFA-205ENST00000372067 MCTP2Q6DN12 878 aa18.89■□□□□ 0.61
VEGFA-205ENST00000372067 SMCR8Q8TEV9 937 aaPredicted RBP18.89■□□□□ 0.61
VEGFA-205ENST00000372067 CWC15Q9P013 229 aaKnown RBP18.89■□□□□ 0.61
VEGFA-205ENST00000372067 ENC1O14682 589 aa18.88■□□□□ 0.61
VEGFA-205ENST00000372067 PPP1R2P41236 205 aa18.88■□□□□ 0.61
VEGFA-205ENST00000372067 ECE1P42892 770 aa18.88■□□□□ 0.61
VEGFA-205ENST00000372067 INHBEP58166 350 aa18.88■□□□□ 0.61
VEGFA-205ENST00000372067 SLC30A10Q6XR72 485 aa18.88■□□□□ 0.61
VEGFA-205ENST00000372067 RRAGAQ7L523 313 aa18.88■□□□□ 0.61
VEGFA-205ENST00000372067 BORCS6Q96GS4 357 aa18.88■□□□□ 0.61
VEGFA-205ENST00000372067 NT5C3AQ9H0P0 336 aa18.88■□□□□ 0.61
VEGFA-205ENST00000372067 BLOC1S4Q9NUP1 217 aa18.88■□□□□ 0.61
VEGFA-205ENST00000372067 NYAP2Q9P242 653 aa18.88■□□□□ 0.61
VEGFA-205ENST00000372067 FRMD4AQ9P2Q2 1039 aaPredicted RBP18.88■□□□□ 0.61
VEGFA-205ENST00000372067 TRIM10Q9UDY6 481 aa18.88■□□□□ 0.61
VEGFA-205ENST00000372067 DDX39AO00148 427 aaKnown RBP18.88■□□□□ 0.61
VEGFA-205ENST00000372067 GCFC2P16383 781 aaKnown RBP18.88■□□□□ 0.61
VEGFA-205ENST00000372067 FAM83BQ5T0W9 1011 aa18.88■□□□□ 0.61
VEGFA-205ENST00000372067 STYK1Q6J9G0 422 aa18.88■□□□□ 0.61
VEGFA-205ENST00000372067 PPP1R18Q6NYC8 613 aa18.88■□□□□ 0.61
VEGFA-205ENST00000372067 CPXCR1Q8N123 301 aa18.88■□□□□ 0.61
VEGFA-205ENST00000372067 GOLGA1Q92805 767 aa18.88■□□□□ 0.61
VEGFA-205ENST00000372067 IRF2BP1Q8IU81 584 aa18.88■□□□□ 0.61
VEGFA-205ENST00000372067 KIAA0895Q8NCT3 520 aa18.88■□□□□ 0.61
VEGFA-205ENST00000372067 GLIS3Q8NEA6 775 aa18.88■□□□□ 0.61
VEGFA-205ENST00000372067 NAP1L4Q99733 375 aaKnown RBP18.88■□□□□ 0.61
VEGFA-205ENST00000372067 NAPGQ99747 312 aaPredicted RBP18.88■□□□□ 0.61
VEGFA-205ENST00000372067 DUSP9Q99956 384 aaKnown RBP18.88■□□□□ 0.61
VEGFA-205ENST00000372067 TCEAL9Q9UHQ7 104 aa18.88■□□□□ 0.61
VEGFA-205ENST00000372067 TBCAO75347 108 aaKnown RBP18.87■□□□□ 0.61
VEGFA-205ENST00000372067 NDUFA10O95299 355 aa18.87■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms