RNA–Protein interactions for RNA: ENST00000372066.7

LDB3-204, Transcript of LIM domain binding 3, humanhuman

TSL 1 (best) BASIC

Gene LDB3, Length 1,598 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-204ENST00000372066 PAXBP1Q9Y5B6 917 aa15.83■□□□□ 0.12
LDB3-204ENST00000372066 RPTORQ8N122 1335 aa15.82■□□□□ 0.12
LDB3-204ENST00000372066 PEX10O60683 326 aa15.82■□□□□ 0.12
LDB3-204ENST00000372066 CYP2B6P20813 491 aa15.82■□□□□ 0.12
LDB3-204ENST00000372066 CDK11BP21127 795 aaKnown RBP15.82■□□□□ 0.12
LDB3-204ENST00000372066 STAT6P42226 847 aa15.82■□□□□ 0.12
LDB3-204ENST00000372066 HERVK_113P62684 666 aa15.82■□□□□ 0.12
LDB3-204ENST00000372066 ZNF543Q08ER8 600 aa15.82■□□□□ 0.12
LDB3-204ENST00000372066 CUL4BQ13620 913 aa15.82■□□□□ 0.12
LDB3-204ENST00000372066 TPD52L1Q16890 204 aaPredicted RBP15.82■□□□□ 0.12
LDB3-204ENST00000372066 FCHSD1Q86WN1 690 aa15.82■□□□□ 0.12
LDB3-204ENST00000372066 RASGRP4Q8TDF6 673 aa15.82■□□□□ 0.12
LDB3-204ENST00000372066 DIS3LQ8TF46 1054 aaKnown RBP15.82■□□□□ 0.12
LDB3-204ENST00000372066 CTAGE1Q96RT6 745 aa15.82■□□□□ 0.12
LDB3-204ENST00000372066 PIGSQ96S52 555 aa15.82■□□□□ 0.12
LDB3-204ENST00000372066 GLT8D2Q9H1C3 349 aa15.82■□□□□ 0.12
LDB3-204ENST00000372066 MTMR7Q9Y216 660 aa15.82■□□□□ 0.12
LDB3-204ENST00000372066 ADAMTS3O15072 1205 aa15.81■□□□□ 0.12
LDB3-204ENST00000372066 UBA7P41226 1012 aa15.81■□□□□ 0.12
LDB3-204ENST00000372066 ADCY7P51828 1080 aa15.81■□□□□ 0.12
LDB3-204ENST00000372066 KCNB1Q14721 858 aa15.81■□□□□ 0.12
LDB3-204ENST00000372066 ARMCX5Q6P1M9 558 aa15.81■□□□□ 0.12
LDB3-204ENST00000372066 HOMER1Q86YM7 354 aa15.81■□□□□ 0.12
LDB3-204ENST00000372066 NUDT12Q9BQG2 462 aa15.81■□□□□ 0.12
LDB3-204ENST00000372066 TXNRD2Q9NNW7 524 aa15.81■□□□□ 0.12
LDB3-204ENST00000372066 ZBTB21Q9ULJ3 1066 aa15.81■□□□□ 0.12
LDB3-204ENST00000372066 PNMA6FA0A0J9YX94 578 aa15.8■□□□□ 0.12
LDB3-204ENST00000372066 SPAG1Q07617 926 aa15.8■□□□□ 0.12
LDB3-204ENST00000372066 ARID5BQ14865 1188 aa15.8■□□□□ 0.12
LDB3-204ENST00000372066 ZNF658Q5TYW1 1059 aaPredicted RBP15.8■□□□□ 0.12
LDB3-204ENST00000372066 RRAGBQ5VZM2 374 aa15.8■□□□□ 0.12
LDB3-204ENST00000372066 CCAR2Q8N163 923 aaKnown RBP15.8■□□□□ 0.12
LDB3-204ENST00000372066 ANKLE1Q8NAG6 615 aa15.8■□□□□ 0.12
LDB3-204ENST00000372066 NAP1L4Q99733 375 aaKnown RBP15.8■□□□□ 0.12
LDB3-204ENST00000372066 RBPJLQ9UBG7 517 aa15.8■□□□□ 0.12
LDB3-204ENST00000372066 PHIPQ8WWQ0 1821 aa15.8■□□□□ 0.12
LDB3-204ENST00000372066 TNNT1P13805 278 aa15.79■□□□□ 0.12
LDB3-204ENST00000372066 PPP1R2P41236 205 aa15.79■□□□□ 0.12
LDB3-204ENST00000372066 Q3C1V9 767 aa15.79■□□□□ 0.12
LDB3-204ENST00000372066 CDKAL1Q5VV42 579 aa15.79■□□□□ 0.12
LDB3-204ENST00000372066 LRRC47Q8N1G4 583 aaKnown RBP15.79■□□□□ 0.12
LDB3-204ENST00000372066 DCAF4Q8WV16 495 aa15.79■□□□□ 0.12
LDB3-204ENST00000372066 TRIB2Q92519 343 aa15.79■□□□□ 0.12
LDB3-204ENST00000372066 MKL1Q969V6 931 aa15.79■□□□□ 0.12
LDB3-204ENST00000372066 EMILIN3Q9NT22 766 aa15.79■□□□□ 0.12
LDB3-204ENST00000372066 NYAP2Q9P242 653 aa15.79■□□□□ 0.12
LDB3-204ENST00000372066 MGAMO43451 1857 aa15.79■□□□□ 0.12
LDB3-204ENST00000372066 A0A1B0GTH6 734 aa15.79■□□□□ 0.12
LDB3-204ENST00000372066 PPP1R3GB7ZBB8 358 aa15.79■□□□□ 0.12
LDB3-204ENST00000372066 GH2P01242 217 aa15.79■□□□□ 0.12
LDB3-204ENST00000372066 RPN1P04843 607 aaKnown RBP15.79■□□□□ 0.12
LDB3-204ENST00000372066 MAPK4P31152 587 aa15.79■□□□□ 0.12
LDB3-204ENST00000372066 TBX2Q13207 712 aaPredicted RBP15.79■□□□□ 0.12
LDB3-204ENST00000372066 PTPN14Q15678 1187 aa15.79■□□□□ 0.12
LDB3-204ENST00000372066 FILIP1LQ4L180 1135 aa15.79■□□□□ 0.12
LDB3-204ENST00000372066 SPECC1LQ69YQ0 1117 aa15.79■□□□□ 0.12
LDB3-204ENST00000372066 NYAP1Q6ZVC0 841 aa15.79■□□□□ 0.12
LDB3-204ENST00000372066 MTERF4Q7Z6M4 381 aaKnown RBP15.79■□□□□ 0.12
LDB3-204ENST00000372066 SOCS4Q8WXH5 440 aa15.79■□□□□ 0.12
LDB3-204ENST00000372066 CCDC47Q96A33 483 aaKnown RBP15.79■□□□□ 0.12
LDB3-204ENST00000372066 MTMR8Q96EF0 704 aa15.79■□□□□ 0.12
LDB3-204ENST00000372066 C16orf45Q96MC5 204 aaPredicted RBP15.79■□□□□ 0.12
LDB3-204ENST00000372066 PAGR1Q9BTK6 254 aa15.79■□□□□ 0.12
LDB3-204ENST00000372066 TMEM60Q9H2L4 133 aa15.79■□□□□ 0.12
LDB3-204ENST00000372066 RWDD2AQ9UIY3 292 aa15.79■□□□□ 0.12
LDB3-204ENST00000372066 SYNPO2Q9UMS6 1093 aa15.79■□□□□ 0.12
LDB3-204ENST00000372066 FRMPD2Q68DX3 1309 aaPredicted RBP15.78■□□□□ 0.12
LDB3-204ENST00000372066 MYH7BA7E2Y1 1941 aa15.78■□□□□ 0.12
LDB3-204ENST00000372066 PTPRFP10586 1907 aa15.78■□□□□ 0.12
LDB3-204ENST00000372066 CCNT1O60563 726 aaKnown RBP15.78■□□□□ 0.12
LDB3-204ENST00000372066 XRCC5P13010 732 aaKnown RBP15.78■□□□□ 0.12
LDB3-204ENST00000372066 ERVK-9P63128 1117 aa15.78■□□□□ 0.12
LDB3-204ENST00000372066 ERVK-24P63145 666 aa15.78■□□□□ 0.12
LDB3-204ENST00000372066 MCTP2Q6DN12 878 aa15.78■□□□□ 0.12
LDB3-204ENST00000372066 TRMT44Q8IYL2 757 aaKnown RBP15.78■□□□□ 0.12
LDB3-204ENST00000372066 C7orf61Q8IZ16 206 aa15.78■□□□□ 0.12
LDB3-204ENST00000372066 ANKRD20A12PQ8NF67 263 aa15.78■□□□□ 0.12
LDB3-204ENST00000372066 RASSF8Q8NHQ8 419 aa15.78■□□□□ 0.12
LDB3-204ENST00000372066 GTF3C2Q8WUA4 911 aaPredicted RBP15.78■□□□□ 0.12
LDB3-204ENST00000372066 MAP7D2Q96T17 732 aa15.78■□□□□ 0.12
LDB3-204ENST00000372066 RAB34Q9BZG1 259 aa15.78■□□□□ 0.12
LDB3-204ENST00000372066 UBA5Q9GZZ9 404 aa15.78■□□□□ 0.12
LDB3-204ENST00000372066 TMX1Q9H3N1 280 aa15.78■□□□□ 0.12
LDB3-204ENST00000372066 KANSL2Q9H9L4 492 aa15.78■□□□□ 0.12
LDB3-204ENST00000372066 RIC8AQ9NPQ8 531 aa15.78■□□□□ 0.12
LDB3-204ENST00000372066 KBTBD4Q9NVX7 518 aa15.78■□□□□ 0.12
LDB3-204ENST00000372066 A0A1W2PPC1 479 aa15.77■□□□□ 0.11
LDB3-204ENST00000372066 PRKAR2AP13861 404 aaKnown RBP15.77■□□□□ 0.11
LDB3-204ENST00000372066 PAK1Q13153 545 aa15.77■□□□□ 0.11
LDB3-204ENST00000372066 STIM1Q13586 685 aa15.77■□□□□ 0.11
LDB3-204ENST00000372066 KARSQ15046 597 aaKnown RBP15.77■□□□□ 0.11
LDB3-204ENST00000372066 ZYXQ15942 572 aaKnown RBP15.77■□□□□ 0.11
LDB3-204ENST00000372066 TMEM266Q2M3C6 531 aa15.77■□□□□ 0.11
LDB3-204ENST00000372066 LETM2Q2VYF4 491 aa15.77■□□□□ 0.11
LDB3-204ENST00000372066 TATDN1Q6P1N9 297 aa15.77■□□□□ 0.11
LDB3-204ENST00000372066 RASGRP2Q7LDG7 609 aa15.77■□□□□ 0.11
LDB3-204ENST00000372066 CABP7Q86V35 215 aa15.77■□□□□ 0.11
LDB3-204ENST00000372066 TBCKQ8TEA7 893 aa15.77■□□□□ 0.11
LDB3-204ENST00000372066 FEZ1Q99689 392 aa15.77■□□□□ 0.11
LDB3-204ENST00000372066 PORCNQ9H237 461 aa15.77■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms