RNA–Protein interactions for RNA: ENST00000371447.3

PDE6C-201, Transcript of phosphodiesterase 6C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDE6C, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6C-201ENST00000371447 CCDC42Q96M95 316 aa13.06□□□□□ -0.32
PDE6C-201ENST00000371447 FEZ1Q99689 392 aa13.06□□□□□ -0.32
PDE6C-201ENST00000371447 AMNQ9BXJ7 453 aa13.06□□□□□ -0.32
PDE6C-201ENST00000371447 PARD6BQ9BYG5 372 aa13.06□□□□□ -0.32
PDE6C-201ENST00000371447 THAP9Q9H5L6 903 aa13.06□□□□□ -0.32
PDE6C-201ENST00000371447 SUGCTQ9HAC7 445 aa13.06□□□□□ -0.32
PDE6C-201ENST00000371447 ZCCHC17Q9NP64 241 aaKnown RBP13.06□□□□□ -0.32
PDE6C-201ENST00000371447 JADE2Q9NQC1 790 aa13.06□□□□□ -0.32
PDE6C-201ENST00000371447 MRFAP1Q9Y605 127 aa13.06□□□□□ -0.32
PDE6C-201ENST00000371447 NHSQ6T4R5 1651 aa13.06□□□□□ -0.32
PDE6C-201ENST00000371447 RCCD1A6NED2 376 aa13.05□□□□□ -0.32
PDE6C-201ENST00000371447 ERICH4A6NGS2 130 aa13.05□□□□□ -0.32
PDE6C-201ENST00000371447 AKR1B10O60218 316 aa13.05□□□□□ -0.32
PDE6C-201ENST00000371447 MAP3K9P80192 1104 aa13.05□□□□□ -0.32
PDE6C-201ENST00000371447 KIAA1755Q5JYT7 1200 aa13.05□□□□□ -0.32
PDE6C-201ENST00000371447 NDST4Q9H3R1 872 aa13.05□□□□□ -0.32
PDE6C-201ENST00000371447 NHEJ1Q9H9Q4 299 aaPredicted RBP13.05□□□□□ -0.32
PDE6C-201ENST00000371447 FZD1Q9UP38 647 aa13.05□□□□□ -0.32
PDE6C-201ENST00000371447 REXO2Q9Y3B8 237 aaKnown RBP13.05□□□□□ -0.32
PDE6C-201ENST00000371447 RSPH10B2B2RC85 870 aa13.05□□□□□ -0.32
PDE6C-201ENST00000371447 FAM86B1E9PN63 330 aa13.05□□□□□ -0.32
PDE6C-201ENST00000371447 PSMD14O00487 310 aa13.05□□□□□ -0.32
PDE6C-201ENST00000371447 FAM86B2P0C5J1 330 aa13.05□□□□□ -0.32
PDE6C-201ENST00000371447 RSPH10BP0C881 870 aa13.05□□□□□ -0.32
PDE6C-201ENST00000371447 CXCR5P32302 372 aa13.05□□□□□ -0.32
PDE6C-201ENST00000371447 SYDE2Q5VT97 1194 aa13.05□□□□□ -0.32
PDE6C-201ENST00000371447 WDR59Q6PJI9 974 aa13.05□□□□□ -0.32
PDE6C-201ENST00000371447 UNC13DQ70J99 1090 aa13.05□□□□□ -0.32
PDE6C-201ENST00000371447 MYOCDQ8IZQ8 938 aa13.05□□□□□ -0.32
PDE6C-201ENST00000371447 CAGE1Q8TC20 777 aa13.05□□□□□ -0.32
PDE6C-201ENST00000371447 SECISBP2LQ93073 1101 aaKnown RBP13.05□□□□□ -0.32
PDE6C-201ENST00000371447 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.05□□□□□ -0.32
PDE6C-201ENST00000371447 KCND1Q9NSA2 647 aa13.05□□□□□ -0.32
PDE6C-201ENST00000371447 ARGLU1Q9NWB6 273 aaPredicted RBP13.05□□□□□ -0.32
PDE6C-201ENST00000371447 DCAF17Q5H9S7 520 aaPredicted RBP13.05□□□□□ -0.32
PDE6C-201ENST00000371447 PRAMEF18Q5VWM3 479 aa13.05□□□□□ -0.32
PDE6C-201ENST00000371447 NAA15Q9BXJ9 866 aaKnown RBP13.05□□□□□ -0.32
PDE6C-201ENST00000371447 BHMT2Q9H2M3 363 aa13.05□□□□□ -0.32
PDE6C-201ENST00000371447 DHX36Q9H2U1 1008 aaKnown RBP13.05□□□□□ -0.32
PDE6C-201ENST00000371447 DDX41Q9UJV9 622 aaKnown RBP13.05□□□□□ -0.32
PDE6C-201ENST00000371447 DDX60LQ5H9U9 1706 aaKnown RBP13.04□□□□□ -0.32
PDE6C-201ENST00000371447 ESYT2A0FGR8 921 aa13.04□□□□□ -0.32
PDE6C-201ENST00000371447 MEIS2O14770 477 aa13.04□□□□□ -0.32
PDE6C-201ENST00000371447 ZNF185O15231 689 aa13.04□□□□□ -0.32
PDE6C-201ENST00000371447 CLIC2O15247 247 aa13.04□□□□□ -0.32
PDE6C-201ENST00000371447 SORBS3O60504 671 aa13.04□□□□□ -0.32
PDE6C-201ENST00000371447 PRPF6O94906 941 aaKnown RBP13.04□□□□□ -0.32
PDE6C-201ENST00000371447 GYS2P54840 703 aa13.04□□□□□ -0.32
PDE6C-201ENST00000371447 RNASE9P60153 205 aaKnown RBP13.04□□□□□ -0.32
PDE6C-201ENST00000371447 CC2D2BQ6DHV5 1058 aa13.04□□□□□ -0.32
PDE6C-201ENST00000371447 TMEM179Q6ZVK1 233 aa13.04□□□□□ -0.32
PDE6C-201ENST00000371447 CNKSR1Q969H4 720 aa13.04□□□□□ -0.32
PDE6C-201ENST00000371447 JAKMIP2Q96AA8 810 aa13.04□□□□□ -0.32
PDE6C-201ENST00000371447 OGFRQ9NZT2 677 aa13.04□□□□□ -0.32
PDE6C-201ENST00000371447 SUGT1Q9Y2Z0 365 aa13.04□□□□□ -0.32
PDE6C-201ENST00000371447 CASP5P51878 434 aa13.04□□□□□ -0.32
PDE6C-201ENST00000371447 CT47A1Q5JQC4 288 aaPredicted RBP13.04□□□□□ -0.32
PDE6C-201ENST00000371447 NAPGQ99747 312 aaPredicted RBP13.04□□□□□ -0.32
PDE6C-201ENST00000371447 TSG101Q99816 390 aa13.04□□□□□ -0.32
PDE6C-201ENST00000371447 STK32BQ9NY57 414 aa13.04□□□□□ -0.32
PDE6C-201ENST00000371447 TAF1LQ8IZX4 1826 aa13.04□□□□□ -0.32
PDE6C-201ENST00000371447 MYH1P12882 1939 aa13.03□□□□□ -0.32
PDE6C-201ENST00000371447 RASSF10A6NK89 507 aa13.03□□□□□ -0.32
PDE6C-201ENST00000371447 FXR2P51116 673 aaKnown RBP eCLIP13.03□□□□□ -0.32
PDE6C-201ENST00000371447 MIIPQ5JXC2 388 aa13.03□□□□□ -0.32
PDE6C-201ENST00000371447 CATSPER3Q86XQ3 398 aa13.03□□□□□ -0.32
PDE6C-201ENST00000371447 FAM114A1Q8IWE2 563 aa13.03□□□□□ -0.32
PDE6C-201ENST00000371447 ZNF507Q8TCN5 953 aa13.03□□□□□ -0.32
PDE6C-201ENST00000371447 GOLGA1Q92805 767 aa13.03□□□□□ -0.32
PDE6C-201ENST00000371447 CUEDC2Q9H467 287 aa13.03□□□□□ -0.32
PDE6C-201ENST00000371447 SMARCAL1Q9NZC9 954 aa13.03□□□□□ -0.32
PDE6C-201ENST00000371447 PRR12Q9ULL5 1215 aa13.03□□□□□ -0.32
PDE6C-201ENST00000371447 COL24A1Q17RW2 1714 aa13.03□□□□□ -0.32
PDE6C-201ENST00000371447 EFCAB8A8MWE9 144 aa13.03□□□□□ -0.32
PDE6C-201ENST00000371447 BUB1O43683 1085 aa13.03□□□□□ -0.32
PDE6C-201ENST00000371447 ZBTB7AO95365 584 aa13.03□□□□□ -0.32
PDE6C-201ENST00000371447 ATP1A1P05023 1023 aaKnown RBP13.03□□□□□ -0.32
PDE6C-201ENST00000371447 ZSCAN20P17040 1043 aaPredicted RBP13.03□□□□□ -0.32
PDE6C-201ENST00000371447 ARHGAP25P42331 645 aa13.03□□□□□ -0.32
PDE6C-201ENST00000371447 KCNA1Q09470 495 aa13.03□□□□□ -0.32
PDE6C-201ENST00000371447 SPA17Q15506 151 aa13.03□□□□□ -0.32
PDE6C-201ENST00000371447 VWA3BQ502W6 1294 aa13.03□□□□□ -0.32
PDE6C-201ENST00000371447 KRT222Q8N1A0 295 aa13.03□□□□□ -0.32
PDE6C-201ENST00000371447 RDH13Q8NBN7 331 aa13.03□□□□□ -0.32
PDE6C-201ENST00000371447 MLXIPQ9HAP2 919 aa13.03□□□□□ -0.32
PDE6C-201ENST00000371447 ATF5Q9Y2D1 282 aaPredicted RBP13.03□□□□□ -0.32
PDE6C-201ENST00000371447 NAV1Q8NEY1 1877 aa13.03□□□□□ -0.32
PDE6C-201ENST00000371447 THSD7AQ9UPZ6 1657 aa13.03□□□□□ -0.32
PDE6C-201ENST00000371447 LRRC53A6NM62 1247 aa13.03□□□□□ -0.32
PDE6C-201ENST00000371447 PLSCR1O15162 318 aa13.03□□□□□ -0.32
PDE6C-201ENST00000371447 HERVK_113P62684 666 aa13.03□□□□□ -0.32
PDE6C-201ENST00000371447 SLC15A2Q16348 729 aa13.03□□□□□ -0.32
PDE6C-201ENST00000371447 STK17AQ9UEE5 414 aa13.03□□□□□ -0.32
PDE6C-201ENST00000371447 PHACTR2O75167 634 aa13.02□□□□□ -0.32
PDE6C-201ENST00000371447 EIF4A3P38919 411 aaKnown RBP13.02□□□□□ -0.32
PDE6C-201ENST00000371447 POLR2FP61218 127 aaKnown RBP13.02□□□□□ -0.32
PDE6C-201ENST00000371447 NBPF9Q3BBW0 867 aa13.02□□□□□ -0.32
PDE6C-201ENST00000371447 NOA1Q8NC60 698 aaKnown RBP13.02□□□□□ -0.32
PDE6C-201ENST00000371447 PRDM4Q9UKN5 801 aa13.02□□□□□ -0.32
PDE6C-201ENST00000371447 CAPN11Q9UMQ6 739 aa13.02□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms