RNA–Protein interactions for RNA: ENST00000368545.7

TPM3-213, Transcript of tropomyosin 3, humanhuman

TSL 1 (best)

Gene TPM3, Length 2,147 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-213ENST00000368545 UBAC1Q9BSL1 405 aa10.12□□□□□ -0.79
TPM3-213ENST00000368545 ZNF287Q9HBT7 754 aa10.12□□□□□ -0.79
TPM3-213ENST00000368545 TACC3Q9Y6A5 838 aa10.12□□□□□ -0.79
TPM3-213ENST00000368545 MRVI1Q9Y6F6 885 aa10.12□□□□□ -0.79
TPM3-213ENST00000368545 MYH8P13535 1937 aa10.11□□□□□ -0.79
TPM3-213ENST00000368545 TGFBR3LH3BV60 316 aa10.11□□□□□ -0.79
TPM3-213ENST00000368545 CDKL5O76039 1030 aa10.11□□□□□ -0.79
TPM3-213ENST00000368545 METAP2P50579 478 aaKnown RBP eCLIP10.11□□□□□ -0.79
TPM3-213ENST00000368545 RHBDL3P58872 404 aa10.11□□□□□ -0.79
TPM3-213ENST00000368545 DACT2Q5SW24 774 aa10.11□□□□□ -0.79
TPM3-213ENST00000368545 C12orf60Q5U649 245 aa10.11□□□□□ -0.79
TPM3-213ENST00000368545 LARP1BQ659C4 914 aaKnown RBP10.11□□□□□ -0.79
TPM3-213ENST00000368545 SYNE3Q6ZMZ3 975 aa10.11□□□□□ -0.79
TPM3-213ENST00000368545 KIAA0825Q8IV33 1275 aa10.11□□□□□ -0.79
TPM3-213ENST00000368545 FAM184AQ8NB25 1140 aa10.11□□□□□ -0.79
TPM3-213ENST00000368545 ZNF280CQ8ND82 737 aa10.11□□□□□ -0.79
TPM3-213ENST00000368545 C1QTNF1Q9BXJ1 281 aa10.11□□□□□ -0.79
TPM3-213ENST00000368545 PTCH2Q9Y6C5 1203 aa10.11□□□□□ -0.79
TPM3-213ENST00000368545 FLT1P17948 1338 aa10.11□□□□□ -0.79
TPM3-213ENST00000368545 TMEM265A0A087WTH1 108 aa10.1□□□□□ -0.79
TPM3-213ENST00000368545 PTPDC1A2A3K4 754 aa10.1□□□□□ -0.79
TPM3-213ENST00000368545 SOX1O00570 391 aaPredicted RBP10.1□□□□□ -0.79
TPM3-213ENST00000368545 CPLX1O14810 134 aa10.1□□□□□ -0.79
TPM3-213ENST00000368545 ZBTB43O43298 467 aa10.1□□□□□ -0.79
TPM3-213ENST00000368545 CLSTN1O94985 981 aa10.1□□□□□ -0.79
TPM3-213ENST00000368545 CCT2P78371 535 aaKnown RBP10.1□□□□□ -0.79
TPM3-213ENST00000368545 CPLX2Q6PUV4 134 aaKnown RBP10.1□□□□□ -0.79
TPM3-213ENST00000368545 TDHQ8IZJ6 230 aa10.1□□□□□ -0.79
TPM3-213ENST00000368545 INCENPQ9NQS7 918 aa10.1□□□□□ -0.79
TPM3-213ENST00000368545 TMEM63CQ9P1W3 806 aa10.1□□□□□ -0.79
TPM3-213ENST00000368545 SLC12A7Q9Y666 1083 aa10.1□□□□□ -0.79
TPM3-213ENST00000368545 MYH15Q9Y2K3 1946 aa10.1□□□□□ -0.79
TPM3-213ENST00000368545 CYP2D7A0A087X1C5 515 aa10.1□□□□□ -0.79
TPM3-213ENST00000368545 PHACTR2O75167 634 aa10.1□□□□□ -0.79
TPM3-213ENST00000368545 TNKSO95271 1327 aa10.1□□□□□ -0.79
TPM3-213ENST00000368545 F13A1P00488 732 aa10.1□□□□□ -0.79
TPM3-213ENST00000368545 IBSPP21815 317 aaPredicted RBP10.1□□□□□ -0.79
TPM3-213ENST00000368545 CCDC178Q5BJE1 867 aa10.1□□□□□ -0.79
TPM3-213ENST00000368545 TMEM214Q6NUQ4 689 aaKnown RBP10.1□□□□□ -0.79
TPM3-213ENST00000368545 MKL1Q969V6 931 aa10.1□□□□□ -0.79
TPM3-213ENST00000368545 RNPC3Q96LT9 517 aaKnown RBP10.1□□□□□ -0.79
TPM3-213ENST00000368545 ZDHHC15Q96MV8 337 aa10.1□□□□□ -0.79
TPM3-213ENST00000368545 SRPK1Q96SB4 655 aaKnown RBP10.1□□□□□ -0.79
TPM3-213ENST00000368545 KLHL42Q9P2K6 505 aa10.1□□□□□ -0.79
TPM3-213ENST00000368545 MTMR6Q9Y217 621 aa10.1□□□□□ -0.79
TPM3-213ENST00000368545 TCHHQ07283 1943 aa10.09□□□□□ -0.79
TPM3-213ENST00000368545 VPS37CA5D8V6 355 aaPredicted RBP10.09□□□□□ -0.79
TPM3-213ENST00000368545 F8W031 263 aaPredicted RBP10.09□□□□□ -0.79
TPM3-213ENST00000368545 ENPP3O14638 875 aa10.09□□□□□ -0.79
TPM3-213ENST00000368545 RANBP6O60518 1105 aaKnown RBP10.09□□□□□ -0.79
TPM3-213ENST00000368545 JAK2O60674 1132 aa10.09□□□□□ -0.79
TPM3-213ENST00000368545 CTDNEP1O95476 244 aa10.09□□□□□ -0.79
TPM3-213ENST00000368545 RPIAP49247 311 aa10.09□□□□□ -0.79
TPM3-213ENST00000368545 IDH3AP50213 366 aa10.09□□□□□ -0.79
TPM3-213ENST00000368545 NFX1Q12986 1120 aaKnown RBP10.09□□□□□ -0.79
TPM3-213ENST00000368545 PPP2R5BQ15173 497 aa10.09□□□□□ -0.79
TPM3-213ENST00000368545 RNF187Q5TA31 235 aaPredicted RBP10.09□□□□□ -0.79
TPM3-213ENST00000368545 ANKS3Q6ZW76 656 aa10.09□□□□□ -0.79
TPM3-213ENST00000368545 MAPKAPK5Q8IW41 473 aa10.09□□□□□ -0.79
TPM3-213ENST00000368545 RHBDD1Q8TEB9 315 aa10.09□□□□□ -0.79
TPM3-213ENST00000368545 AGBL1Q96MI9 1066 aa10.09□□□□□ -0.79
TPM3-213ENST00000368545 MYOZ2Q9NPC6 264 aa10.09□□□□□ -0.79
TPM3-213ENST00000368545 EFR3BQ9Y2G0 817 aa10.09□□□□□ -0.79
TPM3-213ENST00000368545 POLR2AP24928 1970 aaKnown RBP10.09□□□□□ -0.79
TPM3-213ENST00000368545 CCDC196A0A1B0GTZ2 297 aa10.09□□□□□ -0.79
TPM3-213ENST00000368545 GOLGA8AA7E2F4 631 aa10.09□□□□□ -0.79
TPM3-213ENST00000368545 CRKP46108 304 aa10.09□□□□□ -0.79
TPM3-213ENST00000368545 SEC23AQ15436 765 aa10.09□□□□□ -0.79
TPM3-213ENST00000368545 SKOR2Q2VWA4 1001 aaPredicted RBP10.09□□□□□ -0.79
TPM3-213ENST00000368545 SUPT20HL1Q3ZLR7 823 aa10.09□□□□□ -0.79
TPM3-213ENST00000368545 STK11IPQ8N1F8 1099 aa10.09□□□□□ -0.79
TPM3-213ENST00000368545 HSH2DQ96JZ2 352 aa10.09□□□□□ -0.79
TPM3-213ENST00000368545 SUSD3Q96L08 255 aa10.09□□□□□ -0.79
TPM3-213ENST00000368545 TRIM56Q9BRZ2 755 aaKnown RBP10.09□□□□□ -0.79
TPM3-213ENST00000368545 NOC4LQ9BVI4 516 aaKnown RBP10.09□□□□□ -0.79
TPM3-213ENST00000368545 NCOA5Q9HCD5 579 aaKnown RBP10.09□□□□□ -0.79
TPM3-213ENST00000368545 MYH6P13533 1939 aa10.08□□□□□ -0.8
TPM3-213ENST00000368545 TSPY2A6NKD2 308 aa10.08□□□□□ -0.8
TPM3-213ENST00000368545 GADD45BO75293 160 aaPredicted RBP10.08□□□□□ -0.8
TPM3-213ENST00000368545 CALM1P0DP23 149 aa10.08□□□□□ -0.8
TPM3-213ENST00000368545 CALM2P0DP24 149 aa10.08□□□□□ -0.8
TPM3-213ENST00000368545 CALM3P0DP25 149 aa10.08□□□□□ -0.8
TPM3-213ENST00000368545 CYP2D6P10635 497 aa10.08□□□□□ -0.8
TPM3-213ENST00000368545 PTGIRP43119 386 aa10.08□□□□□ -0.8
TPM3-213ENST00000368545 IREB2P48200 963 aaKnown RBP10.08□□□□□ -0.8
TPM3-213ENST00000368545 CRHR2Q13324 411 aa10.08□□□□□ -0.8
TPM3-213ENST00000368545 IFIT1BQ5T764 474 aaKnown RBP10.08□□□□□ -0.8
TPM3-213ENST00000368545 MCTP1Q6DN14 999 aa10.08□□□□□ -0.8
TPM3-213ENST00000368545 PDE12Q6L8Q7 609 aaKnown RBP10.08□□□□□ -0.8
TPM3-213ENST00000368545 C16orf86Q6ZW13 317 aa10.08□□□□□ -0.8
TPM3-213ENST00000368545 MICU3Q86XE3 530 aa10.08□□□□□ -0.8
TPM3-213ENST00000368545 SHISA4Q96DD7 197 aa10.08□□□□□ -0.8
TPM3-213ENST00000368545 MXD3Q9BW11 206 aa10.08□□□□□ -0.8
TPM3-213ENST00000368545 ELP3Q9H9T3 547 aa10.08□□□□□ -0.8
TPM3-213ENST00000368545 MKNK2Q9HBH9 465 aa10.08□□□□□ -0.8
TPM3-213ENST00000368545 H3BQV1 296 aa10.07□□□□□ -0.8
TPM3-213ENST00000368545 PRDM1O75626 825 aa10.07□□□□□ -0.8
TPM3-213ENST00000368545 PLA2G4AP47712 749 aa10.07□□□□□ -0.8
TPM3-213ENST00000368545 GRM2Q14416 872 aa10.07□□□□□ -0.8
TPM3-213ENST00000368545 FILIP1Q7Z7B0 1213 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms