RNA–Protein interactions for RNA: ENST00000368020.5

USF1-202, Transcript of upstream transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USF1, Length 1,717 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-202ENST00000368020 HAS1Q92839 578 aa15.62■□□□□ 0.09
USF1-202ENST00000368020 DCPSQ96C86 337 aaKnown RBP15.62■□□□□ 0.09
USF1-202ENST00000368020 FAM20AQ96MK3 541 aa15.62■□□□□ 0.09
USF1-202ENST00000368020 TSG101Q99816 390 aa15.62■□□□□ 0.09
USF1-202ENST00000368020 TUBGCP2Q9BSJ2 902 aa15.62■□□□□ 0.09
USF1-202ENST00000368020 MYO1AQ9UBC5 1043 aa15.62■□□□□ 0.09
USF1-202ENST00000368020 ZNF215Q9UL58 517 aaPredicted RBP15.62■□□□□ 0.09
USF1-202ENST00000368020 LUC7L2Q9Y383 392 aaKnown RBP15.62■□□□□ 0.09
USF1-202ENST00000368020 FAM196BA6NMK8 535 aa15.61■□□□□ 0.09
USF1-202ENST00000368020 PIK3CDO00329 1044 aa15.61■□□□□ 0.09
USF1-202ENST00000368020 GH2P01242 217 aa15.61■□□□□ 0.09
USF1-202ENST00000368020 SREBF1P36956 1147 aa15.61■□□□□ 0.09
USF1-202ENST00000368020 STAT2P52630 851 aa15.61■□□□□ 0.09
USF1-202ENST00000368020 PMS1P54277 932 aaKnown RBP15.61■□□□□ 0.09
USF1-202ENST00000368020 STK4Q13043 487 aa15.61■□□□□ 0.09
USF1-202ENST00000368020 MCM6Q14566 821 aa15.61■□□□□ 0.09
USF1-202ENST00000368020 PTPN21Q16825 1174 aa15.61■□□□□ 0.09
USF1-202ENST00000368020 GLIPR1L2Q4G1C9 344 aa15.61■□□□□ 0.09
USF1-202ENST00000368020 FIGNQ5HY92 759 aa15.61■□□□□ 0.09
USF1-202ENST00000368020 OR8K1Q8NGG5 319 aa15.61■□□□□ 0.09
USF1-202ENST00000368020 ZNF507Q8TCN5 953 aa15.61■□□□□ 0.09
USF1-202ENST00000368020 DUSP9Q99956 384 aaKnown RBP15.61■□□□□ 0.09
USF1-202ENST00000368020 CAPN11Q9UMQ6 739 aa15.61■□□□□ 0.09
USF1-202ENST00000368020 ADGRG1Q9Y653 693 aa15.61■□□□□ 0.09
USF1-202ENST00000368020 MYMKA6NI61 221 aa15.6■□□□□ 0.09
USF1-202ENST00000368020 MEIS2O14770 477 aa15.6■□□□□ 0.09
USF1-202ENST00000368020 KIF5CO60282 957 aa15.6■□□□□ 0.09
USF1-202ENST00000368020 PLA2G6O60733 806 aa15.6■□□□□ 0.09
USF1-202ENST00000368020 GDF11O95390 407 aa15.6■□□□□ 0.09
USF1-202ENST00000368020 KRT9P35527 623 aa15.6■□□□□ 0.09
USF1-202ENST00000368020 FXR1P51114 621 aaKnown RBP eCLIP15.6■□□□□ 0.09
USF1-202ENST00000368020 GNG11P61952 73 aa15.6■□□□□ 0.09
USF1-202ENST00000368020 ARHGAP4P98171 946 aa15.6■□□□□ 0.09
USF1-202ENST00000368020 CREBRFQ8IUR6 639 aa15.6■□□□□ 0.09
USF1-202ENST00000368020 KIAA0895Q8NCT3 520 aa15.6■□□□□ 0.09
USF1-202ENST00000368020 CPLX3Q8WVH0 158 aa15.6■□□□□ 0.09
USF1-202ENST00000368020 CRYGNQ8WXF5 182 aa15.6■□□□□ 0.09
USF1-202ENST00000368020 CNOT6LQ96LI5 555 aaKnown RBP15.6■□□□□ 0.09
USF1-202ENST00000368020 DNAJC7Q99615 494 aa15.6■□□□□ 0.09
USF1-202ENST00000368020 EHMT1Q9H9B1 1298 aa15.6■□□□□ 0.09
USF1-202ENST00000368020 SOWAHDA6NJG2 315 aa15.6■□□□□ 0.09
USF1-202ENST00000368020 USP17L15C9J2P7 530 aa15.6■□□□□ 0.09
USF1-202ENST00000368020 USP17L13C9JLJ4 530 aa15.6■□□□□ 0.09
USF1-202ENST00000368020 USP17L11C9JVI0 530 aa15.6■□□□□ 0.09
USF1-202ENST00000368020 USP17L18D6R9N7 530 aa15.6■□□□□ 0.09
USF1-202ENST00000368020 USP17L22D6RA61 530 aa15.6■□□□□ 0.09
USF1-202ENST00000368020 USP17L17D6RBQ6 530 aa15.6■□□□□ 0.09
USF1-202ENST00000368020 USP17L19D6RCP7 530 aa15.6■□□□□ 0.09
USF1-202ENST00000368020 USP17L20D6RJB6 530 aa15.6■□□□□ 0.09
USF1-202ENST00000368020 CIITAP33076 1130 aa15.6■□□□□ 0.09
USF1-202ENST00000368020 MTIF2P46199 727 aaKnown RBP15.6■□□□□ 0.09
USF1-202ENST00000368020 TUBB4BP68371 445 aa15.6■□□□□ 0.09
USF1-202ENST00000368020 EHHADHQ08426 723 aa15.6■□□□□ 0.09
USF1-202ENST00000368020 USP17L24Q0WX57 530 aa15.6■□□□□ 0.09
USF1-202ENST00000368020 ANKRD40Q6AI12 368 aa15.6■□□□□ 0.09
USF1-202ENST00000368020 USP17L6PQ6QN14 398 aa15.6■□□□□ 0.09
USF1-202ENST00000368020 SULF1Q8IWU6 871 aa15.6■□□□□ 0.09
USF1-202ENST00000368020 CCDC65Q8IXS2 484 aa15.6■□□□□ 0.09
USF1-202ENST00000368020 MNS1Q8NEH6 495 aa15.6■□□□□ 0.09
USF1-202ENST00000368020 ZNF397Q8NF99 534 aaPredicted RBP15.6■□□□□ 0.09
USF1-202ENST00000368020 CHURC1Q8WUH1 139 aa15.6■□□□□ 0.09
USF1-202ENST00000368020 DDX12PQ92771 950 aa15.6■□□□□ 0.09
USF1-202ENST00000368020 ERGIC2Q96RQ1 377 aa15.6■□□□□ 0.09
USF1-202ENST00000368020 CCDC94Q9BW85 323 aaPredicted RBP15.6■□□□□ 0.09
USF1-202ENST00000368020 ZNHIT6Q9NWK9 470 aaKnown RBP15.6■□□□□ 0.09
USF1-202ENST00000368020 TMX2Q9Y320 296 aa15.6■□□□□ 0.09
USF1-202ENST00000368020 A0A1W2PQJ5 194 aa15.59■□□□□ 0.09
USF1-202ENST00000368020 PES1O00541 588 aaKnown RBP15.59■□□□□ 0.09
USF1-202ENST00000368020 CCDC84Q86UT8 332 aaPredicted RBP15.59■□□□□ 0.09
USF1-202ENST00000368020 TSC1Q92574 1164 aa15.59■□□□□ 0.09
USF1-202ENST00000368020 CYP3A4P08684 503 aa15.58■□□□□ 0.08
USF1-202ENST00000368020 FCER1AP12319 257 aa15.58■□□□□ 0.08
USF1-202ENST00000368020 TRIM21P19474 475 aaKnown RBP15.58■□□□□ 0.08
USF1-202ENST00000368020 TBC1D8BQ0IIM8 1120 aa15.58■□□□□ 0.08
USF1-202ENST00000368020 SUPT20HL1Q3ZLR7 823 aa15.58■□□□□ 0.08
USF1-202ENST00000368020 ARHGAP29Q52LW3 1261 aa15.58■□□□□ 0.08
USF1-202ENST00000368020 RAD9BQ6WBX8 426 aa15.58■□□□□ 0.08
USF1-202ENST00000368020 FAM160B2Q86V87 743 aa15.58■□□□□ 0.08
USF1-202ENST00000368020 FEZ1Q99689 392 aa15.58■□□□□ 0.08
USF1-202ENST00000368020 NOC4LQ9BVI4 516 aaKnown RBP15.58■□□□□ 0.08
USF1-202ENST00000368020 SLC39A2Q9NP94 309 aa15.58■□□□□ 0.08
USF1-202ENST00000368020 LOXHD1Q8IVV2 1947 aa15.58■□□□□ 0.08
USF1-202ENST00000368020 EFCAB8A8MWE9 144 aa15.57■□□□□ 0.08
USF1-202ENST00000368020 COBLO75128 1261 aa15.57■□□□□ 0.08
USF1-202ENST00000368020 URI1O94763 535 aaPredicted RBP15.57■□□□□ 0.08
USF1-202ENST00000368020 GNA14O95837 355 aa15.57■□□□□ 0.08
USF1-202ENST00000368020 IDEP14735 1019 aa15.57■□□□□ 0.08
USF1-202ENST00000368020 MAN2A1Q16706 1144 aa15.57■□□□□ 0.08
USF1-202ENST00000368020 DCAF15Q66K64 600 aa15.57■□□□□ 0.08
USF1-202ENST00000368020 PPP4R3CPQ6ZMV5 832 aa15.57■□□□□ 0.08
USF1-202ENST00000368020 KRT26Q7Z3Y9 468 aa15.57■□□□□ 0.08
USF1-202ENST00000368020 CDAN1Q8IWY9 1227 aa15.57■□□□□ 0.08
USF1-202ENST00000368020 MYOCDQ8IZQ8 938 aa15.57■□□□□ 0.08
USF1-202ENST00000368020 RRAGCQ9HB90 399 aa15.57■□□□□ 0.08
USF1-202ENST00000368020 KRT83P78385 493 aa15.57■□□□□ 0.08
USF1-202ENST00000368020 ZBED6P86452 979 aa15.57■□□□□ 0.08
USF1-202ENST00000368020 CDK17Q00537 523 aa15.57■□□□□ 0.08
USF1-202ENST00000368020 EAPPQ56P03 285 aaPredicted RBP15.57■□□□□ 0.08
USF1-202ENST00000368020 FAM26FQ5R3K3 315 aa15.57■□□□□ 0.08
USF1-202ENST00000368020 DYMQ7RTS9 669 aa15.57■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms