RNA–Protein interactions for RNA: ENST00000366896.5

PRKN-204, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene PRKN, Length 2,514 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-204ENST00000366896 KRT86O43790 486 aa16.32■□□□□ 0.2
PRKN-204ENST00000366896 PLCG1P19174 1290 aa16.32■□□□□ 0.2
PRKN-204ENST00000366896 ZBED6P86452 979 aa16.32■□□□□ 0.2
PRKN-204ENST00000366896 KRT25Q7Z3Z0 450 aa16.32■□□□□ 0.2
PRKN-204ENST00000366896 ERGIC2Q96RQ1 377 aa16.32■□□□□ 0.2
PRKN-204ENST00000366896 NCAPGQ9BPX3 1015 aa16.32■□□□□ 0.2
PRKN-204ENST00000366896 CRACR2AQ9BSW2 395 aa16.32■□□□□ 0.2
PRKN-204ENST00000366896 AGPAT5Q9NUQ2 364 aa16.32■□□□□ 0.2
PRKN-204ENST00000366896 NKRFO15226 690 aaKnown RBP eCLIP16.32■□□□□ 0.2
PRKN-204ENST00000366896 TSPY3P0CV98 308 aa16.32■□□□□ 0.2
PRKN-204ENST00000366896 TSPY8P0CW00 308 aa16.32■□□□□ 0.2
PRKN-204ENST00000366896 PLCG2P16885 1265 aa16.32■□□□□ 0.2
PRKN-204ENST00000366896 CKAP4Q07065 602 aaKnown RBP16.32■□□□□ 0.2
PRKN-204ENST00000366896 SWT1Q5T5J6 900 aaKnown RBP16.32■□□□□ 0.2
PRKN-204ENST00000366896 C9orf131Q5VYM1 1079 aa16.32■□□□□ 0.2
PRKN-204ENST00000366896 AMOTL1Q8IY63 956 aa16.32■□□□□ 0.2
PRKN-204ENST00000366896 MICALL1Q8N3F8 863 aa16.32■□□□□ 0.2
PRKN-204ENST00000366896 FAM76AQ8TAV0 307 aa16.32■□□□□ 0.2
PRKN-204ENST00000366896 P2RX5Q93086 422 aa16.32■□□□□ 0.2
PRKN-204ENST00000366896 PURBQ96QR8 312 aaKnown RBP16.32■□□□□ 0.2
PRKN-204ENST00000366896 TMEM47Q9BQJ4 181 aa16.32■□□□□ 0.2
PRKN-204ENST00000366896 TUBGCP2Q9BSJ2 902 aa16.32■□□□□ 0.2
PRKN-204ENST00000366896 SAP30BPQ9UHR5 308 aaKnown RBP16.32■□□□□ 0.2
PRKN-204ENST00000366896 STX8Q9UNK0 236 aa16.32■□□□□ 0.2
PRKN-204ENST00000366896 RPS12P25398 132 aaKnown RBP16.31■□□□□ 0.2
PRKN-204ENST00000366896 CCNI2Q6ZMN8 369 aaPredicted RBP16.31■□□□□ 0.2
PRKN-204ENST00000366896 CSGALNACT2Q8N6G5 542 aa16.31■□□□□ 0.2
PRKN-204ENST00000366896 SELENOOQ9BVL4 669 aa16.31■□□□□ 0.2
PRKN-204ENST00000366896 TRIM9Q9C026 710 aa16.31■□□□□ 0.2
PRKN-204ENST00000366896 ZNF287Q9HBT7 754 aa16.31■□□□□ 0.2
PRKN-204ENST00000366896 HDAC9Q9UKV0 1011 aa16.31■□□□□ 0.2
PRKN-204ENST00000366896 GJA3Q9Y6H8 435 aa16.31■□□□□ 0.2
PRKN-204ENST00000366896 FOCADQ5VW36 1801 aa16.31■□□□□ 0.2
PRKN-204ENST00000366896 RCCD1A6NED2 376 aa16.3■□□□□ 0.2
PRKN-204ENST00000366896 SRGAP2O75044 1071 aa16.3■□□□□ 0.2
PRKN-204ENST00000366896 IRAK1P51617 712 aa16.3■□□□□ 0.2
PRKN-204ENST00000366896 RBM5P52756 815 aaKnown RBP eCLIP16.3■□□□□ 0.2
PRKN-204ENST00000366896 AMPD3Q01432 767 aa16.3■□□□□ 0.2
PRKN-204ENST00000366896 CABP7Q86V35 215 aa16.3■□□□□ 0.2
PRKN-204ENST00000366896 TGFBRAP1Q8WUH2 860 aa16.3■□□□□ 0.2
PRKN-204ENST00000366896 ZNHIT6Q9NWK9 470 aaKnown RBP16.3■□□□□ 0.2
PRKN-204ENST00000366896 ABCB11O95342 1321 aa16.3■□□□□ 0.2
PRKN-204ENST00000366896 OR52Z1P0C646 297 aa16.3■□□□□ 0.2
PRKN-204ENST00000366896 MYBL2P10244 700 aa16.3■□□□□ 0.2
PRKN-204ENST00000366896 HNRNPH3P31942 346 aaKnown RBP16.3■□□□□ 0.2
PRKN-204ENST00000366896 CCDC122Q5T0U0 273 aa16.3■□□□□ 0.2
PRKN-204ENST00000366896 ANKRD40Q6AI12 368 aa16.3■□□□□ 0.2
PRKN-204ENST00000366896 MCTP2Q6DN12 878 aa16.3■□□□□ 0.2
PRKN-204ENST00000366896 CDC42EP5Q6NZY7 148 aa16.3■□□□□ 0.2
PRKN-204ENST00000366896 TEX11Q8IYF3 940 aa16.3■□□□□ 0.2
PRKN-204ENST00000366896 OGFOD1Q8N543 542 aa16.3■□□□□ 0.2
PRKN-204ENST00000366896 MYH1P12882 1939 aa16.3■□□□□ 0.2
PRKN-204ENST00000366896 GOLGA6CA6NDK9 693 aa16.29■□□□□ 0.2
PRKN-204ENST00000366896 GOLGA6DP0CG33 693 aa16.29■□□□□ 0.2
PRKN-204ENST00000366896 FCER1AP12319 257 aa16.29■□□□□ 0.2
PRKN-204ENST00000366896 RASA1P20936 1047 aa16.29■□□□□ 0.2
PRKN-204ENST00000366896 GMPSP49915 693 aaPredicted RBP16.29■□□□□ 0.2
PRKN-204ENST00000366896 STK4Q13043 487 aa16.29■□□□□ 0.2
PRKN-204ENST00000366896 LETM2Q2VYF4 491 aa16.29■□□□□ 0.2
PRKN-204ENST00000366896 FOXR2Q6PJQ5 311 aa16.29■□□□□ 0.2
PRKN-204ENST00000366896 MAPKAPK5Q8IW41 473 aa16.29■□□□□ 0.2
PRKN-204ENST00000366896 HPS3Q969F9 1004 aa16.29■□□□□ 0.2
PRKN-204ENST00000366896 GDAP1L1Q96MZ0 367 aa16.29■□□□□ 0.2
PRKN-204ENST00000366896 MYCBPQ99417 103 aaPredicted RBP16.29■□□□□ 0.2
PRKN-204ENST00000366896 LACRTQ9GZZ8 138 aa16.29■□□□□ 0.2
PRKN-204ENST00000366896 GOLGA6AQ9NYA3 693 aa16.29■□□□□ 0.2
PRKN-204ENST00000366896 NAV1Q8NEY1 1877 aa16.29■□□□□ 0.2
PRKN-204ENST00000366896 SHTN1A0MZ66 631 aa16.29■□□□□ 0.2
PRKN-204ENST00000366896 ERLIN2O94905 339 aa16.29■□□□□ 0.2
PRKN-204ENST00000366896 GNA11P29992 359 aa16.29■□□□□ 0.2
PRKN-204ENST00000366896 CCT5P48643 541 aa16.29■□□□□ 0.2
PRKN-204ENST00000366896 PDE4DQ08499 809 aa16.29■□□□□ 0.2
PRKN-204ENST00000366896 ZNF444Q8N0Y2 327 aaPredicted RBP16.29■□□□□ 0.2
PRKN-204ENST00000366896 CNOT6LQ96LI5 555 aaKnown RBP16.29■□□□□ 0.2
PRKN-204ENST00000366896 CEP89Q96ST8 783 aa16.29■□□□□ 0.2
PRKN-204ENST00000366896 TSGA10Q9BZW7 698 aa16.29■□□□□ 0.2
PRKN-204ENST00000366896 USP40Q9NVE5 1235 aa16.29■□□□□ 0.2
PRKN-204ENST00000366896 ESYT2A0FGR8 921 aa16.28■□□□□ 0.2
PRKN-204ENST00000366896 KLRF2D3W0D1 207 aa16.28■□□□□ 0.2
PRKN-204ENST00000366896 EBAG9O00559 213 aa16.28■□□□□ 0.2
PRKN-204ENST00000366896 CCNT1O60563 726 aaKnown RBP16.28■□□□□ 0.2
PRKN-204ENST00000366896 ZMYND10O75800 440 aa16.28■□□□□ 0.2
PRKN-204ENST00000366896 IPO7O95373 1038 aaKnown RBP16.28■□□□□ 0.2
PRKN-204ENST00000366896 TRIM21P19474 475 aaKnown RBP16.28■□□□□ 0.2
PRKN-204ENST00000366896 NAPAP54920 295 aa16.28■□□□□ 0.2
PRKN-204ENST00000366896 TBC1D8BQ0IIM8 1120 aa16.28■□□□□ 0.2
PRKN-204ENST00000366896 PPFIA1Q13136 1202 aa16.28■□□□□ 0.2
PRKN-204ENST00000366896 NONOQ15233 471 aaKnown RBP eCLIP16.28■□□□□ 0.2
PRKN-204ENST00000366896 GSPT2Q8IYD1 628 aaKnown RBP16.28■□□□□ 0.2
PRKN-204ENST00000366896 GPC2Q8N158 579 aa16.28■□□□□ 0.2
PRKN-204ENST00000366896 JAKMIP2Q96AA8 810 aa16.28■□□□□ 0.2
PRKN-204ENST00000366896 CAPZA3Q96KX2 299 aa16.28■□□□□ 0.2
PRKN-204ENST00000366896 FAM169AQ9Y6X4 670 aa16.28■□□□□ 0.2
PRKN-204ENST00000366896 DDX60LQ5H9U9 1706 aaKnown RBP16.28■□□□□ 0.2
PRKN-204ENST00000366896 GOLGA6BA6NDN3 693 aa16.28■□□□□ 0.2
PRKN-204ENST00000366896 hCG_1984214I3L0E3 225 aa16.28■□□□□ 0.2
PRKN-204ENST00000366896 ZNF280AP59817 542 aaPredicted RBP16.28■□□□□ 0.2
PRKN-204ENST00000366896 ASIC1P78348 528 aa16.28■□□□□ 0.2
PRKN-204ENST00000366896 SKIDA1Q1XH10 827 aa16.28■□□□□ 0.2
PRKN-204ENST00000366896 MIIPQ5JXC2 388 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms