RNA–Protein interactions for RNA: ENST00000357085.4

TRIM38-201, Transcript of tripartite motif containing 38, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM38, Length 9,413 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38-201ENST00000357085 ATP6V1G2O95670 118 aa7.15□□□□□ -1.26
TRIM38-201ENST00000357085 RPN1P04843 607 aaKnown RBP7.15□□□□□ -1.26
TRIM38-201ENST00000357085 PARP1P09874 1014 aaKnown RBP7.15□□□□□ -1.26
TRIM38-201ENST00000357085 ZBTB16Q05516 673 aa7.15□□□□□ -1.26
TRIM38-201ENST00000357085 ASIC2Q16515 512 aa7.15□□□□□ -1.26
TRIM38-201ENST00000357085 MAN2A1Q16706 1144 aa7.15□□□□□ -1.26
TRIM38-201ENST00000357085 RIBC1Q8N443 379 aaPredicted RBP7.15□□□□□ -1.26
TRIM38-201ENST00000357085 CRNKL1Q9BZJ0 848 aaKnown RBP7.15□□□□□ -1.26
TRIM38-201ENST00000357085 ANKRD62A6NC57 917 aa7.15□□□□□ -1.26
TRIM38-201ENST00000357085 ALX1Q15699 326 aa7.15□□□□□ -1.26
TRIM38-201ENST00000357085 EPB41L5Q9HCM4 733 aa7.15□□□□□ -1.26
TRIM38-201ENST00000357085 ARL2BPQ9Y2Y0 163 aa7.15□□□□□ -1.26
TRIM38-201ENST00000357085 KIF13BQ9NQT8 1826 aa7.15□□□□□ -1.26
TRIM38-201ENST00000357085 FAM187AA6NFU0 413 aa7.15□□□□□ -1.26
TRIM38-201ENST00000357085 SERPINB8P50452 374 aa7.15□□□□□ -1.26
TRIM38-201ENST00000357085 PTPN21Q16825 1174 aa7.15□□□□□ -1.26
TRIM38-201ENST00000357085 METTL24Q5JXM2 366 aa7.15□□□□□ -1.26
TRIM38-201ENST00000357085 HDAC6Q9UBN7 1215 aa7.15□□□□□ -1.26
TRIM38-201ENST00000357085 TLDC2A0PJX2 215 aa7.15□□□□□ -1.27
TRIM38-201ENST00000357085 PTPREP23469 700 aa7.15□□□□□ -1.27
TRIM38-201ENST00000357085 GCKRQ14397 625 aa7.15□□□□□ -1.27
TRIM38-201ENST00000357085 ZNF827Q17R98 1081 aa7.15□□□□□ -1.27
TRIM38-201ENST00000357085 MTHFSDQ2M296 383 aaKnown RBP7.15□□□□□ -1.27
TRIM38-201ENST00000357085 HHATQ5VTY9 493 aa7.15□□□□□ -1.27
TRIM38-201ENST00000357085 KLHL7Q8IXQ5 586 aa7.15□□□□□ -1.27
TRIM38-201ENST00000357085 SEC16BQ96JE7 1060 aa7.15□□□□□ -1.27
TRIM38-201ENST00000357085 PHACTR1Q9C0D0 580 aa7.15□□□□□ -1.27
TRIM38-201ENST00000357085 WLSQ5T9L3 541 aa7.15□□□□□ -1.27
TRIM38-201ENST00000357085 PLBD2Q8NHP8 589 aa7.15□□□□□ -1.27
TRIM38-201ENST00000357085 PSMB7Q99436 277 aa7.15□□□□□ -1.27
TRIM38-201ENST00000357085 AMOTL2Q9Y2J4 779 aa7.15□□□□□ -1.27
TRIM38-201ENST00000357085 ACEP12821 1306 aa7.15□□□□□ -1.27
TRIM38-201ENST00000357085 CCT8L1PA6NM43 557 aa7.15□□□□□ -1.27
TRIM38-201ENST00000357085 KRT13P13646 458 aa7.15□□□□□ -1.27
TRIM38-201ENST00000357085 IFIT1BQ5T764 474 aaKnown RBP7.15□□□□□ -1.27
TRIM38-201ENST00000357085 DZIP1Q86YF9 867 aaKnown RBP7.15□□□□□ -1.27
TRIM38-201ENST00000357085 FAM81AQ8TBF8 368 aa7.15□□□□□ -1.27
TRIM38-201ENST00000357085 IWS1Q96ST2 819 aa7.15□□□□□ -1.27
TRIM38-201ENST00000357085 TRIM55Q9BYV6 548 aa7.15□□□□□ -1.27
TRIM38-201ENST00000357085 NHEJ1Q9H9Q4 299 aaPredicted RBP7.15□□□□□ -1.27
TRIM38-201ENST00000357085 TUBA8Q9NY65 449 aaPredicted RBP7.15□□□□□ -1.27
TRIM38-201ENST00000357085 SALL1Q9NSC2 1324 aa7.15□□□□□ -1.27
TRIM38-201ENST00000357085 LAMB4A4D0S4 1761 aa7.15□□□□□ -1.27
TRIM38-201ENST00000357085 USP54Q70EL1 1684 aa7.14□□□□□ -1.27
TRIM38-201ENST00000357085 MAPK13O15264 365 aa7.14□□□□□ -1.27
TRIM38-201ENST00000357085 STARD3NLO95772 234 aa7.14□□□□□ -1.27
TRIM38-201ENST00000357085 PDHA1P08559 390 aa7.14□□□□□ -1.27
TRIM38-201ENST00000357085 ZNF18P17022 549 aa7.14□□□□□ -1.27
TRIM38-201ENST00000357085 HDLBPQ00341 1268 aaKnown RBP7.14□□□□□ -1.27
TRIM38-201ENST00000357085 PRPF4BQ13523 1007 aaKnown RBP7.14□□□□□ -1.27
TRIM38-201ENST00000357085 TRMT10CQ7L0Y3 403 aaKnown RBP7.14□□□□□ -1.27
TRIM38-201ENST00000357085 AGXT2Q9BYV1 514 aa7.14□□□□□ -1.27
TRIM38-201ENST00000357085 ROPN1BQ9BZX4 212 aaPredicted RBP7.14□□□□□ -1.27
TRIM38-201ENST00000357085 ROPN1Q9HAT0 212 aaPredicted RBP7.14□□□□□ -1.27
TRIM38-201ENST00000357085 KCNK9Q9NPC2 374 aa7.14□□□□□ -1.27
TRIM38-201ENST00000357085 PPP1R9AQ9ULJ8 1098 aa7.14□□□□□ -1.27
TRIM38-201ENST00000357085 PDS5AQ29RF7 1337 aaKnown RBP7.14□□□□□ -1.27
TRIM38-201ENST00000357085 RPS6KA3P51812 740 aa7.14□□□□□ -1.27
TRIM38-201ENST00000357085 HAND2P61296 217 aa7.14□□□□□ -1.27
TRIM38-201ENST00000357085 ROR2Q01974 943 aaKnown RBP7.14□□□□□ -1.27
TRIM38-201ENST00000357085 OTUD7BQ6GQQ9 843 aa7.14□□□□□ -1.27
TRIM38-201ENST00000357085 C2CD5Q86YS7 1000 aa7.14□□□□□ -1.27
TRIM38-201ENST00000357085 PASD1Q8IV76 773 aa7.14□□□□□ -1.27
TRIM38-201ENST00000357085 ARHGEF2Q92974 986 aaKnown RBP7.14□□□□□ -1.27
TRIM38-201ENST00000357085 ZNF148Q9UQR1 794 aa7.14□□□□□ -1.27
TRIM38-201ENST00000357085 HSPD1P10809 573 aaKnown RBP7.14□□□□□ -1.27
TRIM38-201ENST00000357085 CHRNA3P32297 505 aa7.14□□□□□ -1.27
TRIM38-201ENST00000357085 DHX9Q08211 1270 aaKnown RBP7.14□□□□□ -1.27
TRIM38-201ENST00000357085 CCDC14Q49A88 953 aa7.14□□□□□ -1.27
TRIM38-201ENST00000357085 FUKQ8N0W3 1084 aa7.14□□□□□ -1.27
TRIM38-201ENST00000357085 RIN2Q8WYP3 895 aaPredicted RBP7.14□□□□□ -1.27
TRIM38-201ENST00000357085 MRPL40Q9NQ50 206 aaKnown RBP7.14□□□□□ -1.27
TRIM38-201ENST00000357085 UTYO14607 1347 aa7.14□□□□□ -1.27
TRIM38-201ENST00000357085 SRGAP2O75044 1071 aa7.14□□□□□ -1.27
TRIM38-201ENST00000357085 KIRREL3Q8IZU9 778 aa7.14□□□□□ -1.27
TRIM38-201ENST00000357085 DCAF5Q96JK2 942 aa7.14□□□□□ -1.27
TRIM38-201ENST00000357085 BUD13Q9BRD0 619 aaKnown RBP eCLIP7.14□□□□□ -1.277e-13■■■■□ 20
TRIM38-201ENST00000357085 ECT2Q9H8V3 914 aa7.14□□□□□ -1.27
TRIM38-201ENST00000357085 SMG5Q9UPR3 1016 aaKnown RBP7.14□□□□□ -1.27
TRIM38-201ENST00000357085 SSX2IPQ9Y2D8 614 aa7.14□□□□□ -1.27
TRIM38-201ENST00000357085 LRCH1Q9Y2L9 728 aa7.14□□□□□ -1.27
TRIM38-201ENST00000357085 SYF2O95926 243 aaKnown RBP7.14□□□□□ -1.27
TRIM38-201ENST00000357085 ATP1A1P05023 1023 aaKnown RBP7.14□□□□□ -1.27
TRIM38-201ENST00000357085 RAPGEF1Q13905 1077 aa7.14□□□□□ -1.27
TRIM38-201ENST00000357085 KRT79Q5XKE5 535 aa7.14□□□□□ -1.27
TRIM38-201ENST00000357085 ZC3H18Q86VM9 953 aaKnown RBP7.14□□□□□ -1.27
TRIM38-201ENST00000357085 PARD3BQ8TEW8 1205 aa7.14□□□□□ -1.27
TRIM38-201ENST00000357085 ZNF483Q8TF39 744 aaPredicted RBP7.14□□□□□ -1.27
TRIM38-201ENST00000357085 SAMSN1Q9NSI8 373 aaKnown RBP7.14□□□□□ -1.27
TRIM38-201ENST00000357085 SERPING1P05155 500 aa7.14□□□□□ -1.27
TRIM38-201ENST00000357085 MTF1Q14872 753 aa7.14□□□□□ -1.27
TRIM38-201ENST00000357085 MAB21L3Q8N8X9 362 aa7.14□□□□□ -1.27
TRIM38-201ENST00000357085 TEKT4Q8WW24 435 aa7.14□□□□□ -1.27
TRIM38-201ENST00000357085 SERTAD1Q9UHV2 236 aa7.14□□□□□ -1.27
TRIM38-201ENST00000357085 STRNO43815 780 aa7.14□□□□□ -1.27
TRIM38-201ENST00000357085 IDH1O75874 414 aaKnown RBP7.14□□□□□ -1.27
TRIM38-201ENST00000357085 BCRP11274 1271 aa7.14□□□□□ -1.27
TRIM38-201ENST00000357085 ATP4AP20648 1035 aa7.14□□□□□ -1.27
TRIM38-201ENST00000357085 TBX2Q13207 712 aaPredicted RBP7.14□□□□□ -1.27
TRIM38-201ENST00000357085 KCNV1Q6PIU1 500 aa7.14□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms