RNA–Protein interactions for RNA: ENST00000344280.7

CCDC38-201, Transcript of coiled-coil domain containing 38, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC38, Length 2,277 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-201ENST00000344280 SLFN13Q68D06 897 aa23.78■■□□□ 1.4
CCDC38-201ENST00000344280 POTEBQ6S5H4 581 aa23.78■■□□□ 1.4
CCDC38-201ENST00000344280 ZNF662Q6ZS27 426 aa23.78■■□□□ 1.4
CCDC38-201ENST00000344280 C2CD5Q86YS7 1000 aa23.78■■□□□ 1.4
CCDC38-201ENST00000344280 MASTLQ96GX5 879 aa23.78■■□□□ 1.4
CCDC38-201ENST00000344280 MACROD2A1Z1Q3 448 aa23.77■■□□□ 1.4
CCDC38-201ENST00000344280 KIF20AO95235 890 aa23.77■■□□□ 1.4
CCDC38-201ENST00000344280 ABCB6Q9NP58 842 aa23.77■■□□□ 1.4
CCDC38-201ENST00000344280 PANK4Q9NVE7 773 aa23.77■■□□□ 1.4
CCDC38-201ENST00000344280 ZNF219Q9P2Y4 722 aaPredicted RBP23.77■■□□□ 1.4
CCDC38-201ENST00000344280 SCN9AQ15858 1988 aa23.77■■□□□ 1.4
CCDC38-201ENST00000344280 GCFC2P16383 781 aaKnown RBP23.77■■□□□ 1.4
CCDC38-201ENST00000344280 OAS2P29728 719 aaKnown RBP23.77■■□□□ 1.4
CCDC38-201ENST00000344280 PDE6BP35913 854 aa23.77■■□□□ 1.4
CCDC38-201ENST00000344280 CDK17Q00537 523 aa23.77■■□□□ 1.4
CCDC38-201ENST00000344280 ZCWPW2Q504Y3 356 aa23.77■■□□□ 1.4
CCDC38-201ENST00000344280 PODNQ7Z5L7 613 aa23.77■■□□□ 1.4
CCDC38-201ENST00000344280 SMCR8Q8TEV9 937 aaPredicted RBP23.77■■□□□ 1.4
CCDC38-201ENST00000344280 MKL1Q969V6 931 aa23.77■■□□□ 1.4
CCDC38-201ENST00000344280 CCDC42Q96M95 316 aa23.77■■□□□ 1.4
CCDC38-201ENST00000344280 MMS19Q96T76 1030 aa23.77■■□□□ 1.4
CCDC38-201ENST00000344280 ANO3Q9BYT9 981 aa23.77■■□□□ 1.4
CCDC38-201ENST00000344280 MAP2K7O14733 419 aa23.76■■□□□ 1.39
CCDC38-201ENST00000344280 MEIS2O14770 477 aa23.76■■□□□ 1.39
CCDC38-201ENST00000344280 GDF11O95390 407 aa23.76■■□□□ 1.39
CCDC38-201ENST00000344280 PAPD7Q5XG87 772 aaKnown RBP23.76■■□□□ 1.39
CCDC38-201ENST00000344280 MYOCDQ8IZQ8 938 aa23.76■■□□□ 1.39
CCDC38-201ENST00000344280 AKT1S1Q96B36 256 aa23.76■■□□□ 1.39
CCDC38-201ENST00000344280 CAPZA3Q96KX2 299 aa23.76■■□□□ 1.39
CCDC38-201ENST00000344280 KCNMB3Q9NPA1 279 aa23.76■■□□□ 1.39
CCDC38-201ENST00000344280 SAR1BQ9Y6B6 198 aa23.76■■□□□ 1.39
CCDC38-201ENST00000344280 HNRNPH3P31942 346 aaKnown RBP23.76■■□□□ 1.39
CCDC38-201ENST00000344280 PSMD2Q13200 908 aa23.76■■□□□ 1.39
CCDC38-201ENST00000344280 HYIQ5T013 277 aa23.76■■□□□ 1.39
CCDC38-201ENST00000344280 HNRNPLLQ8WVV9 542 aaKnown RBP23.76■■□□□ 1.39
CCDC38-201ENST00000344280 PURBQ96QR8 312 aaKnown RBP23.76■■□□□ 1.39
CCDC38-201ENST00000344280 RNF216Q9NWF9 866 aaPredicted RBP23.76■■□□□ 1.39
CCDC38-201ENST00000344280 LRRC53A6NM62 1247 aa23.75■■□□□ 1.39
CCDC38-201ENST00000344280 IPO7O95373 1038 aaKnown RBP23.75■■□□□ 1.39
CCDC38-201ENST00000344280 FAM26FQ5R3K3 315 aa23.75■■□□□ 1.39
CCDC38-201ENST00000344280 LRRC27Q9C0I9 530 aa23.75■■□□□ 1.39
CCDC38-201ENST00000344280 KANSL2Q9H9L4 492 aa23.75■■□□□ 1.39
CCDC38-201ENST00000344280 PI4KBQ9UBF8 816 aa23.75■■□□□ 1.39
CCDC38-201ENST00000344280 PCDHA2Q9Y5H9 948 aa23.75■■□□□ 1.39
CCDC38-201ENST00000344280 POTEB2H3BUK9 544 aa23.75■■□□□ 1.39
CCDC38-201ENST00000344280 ZNF185O15231 689 aa23.75■■□□□ 1.39
CCDC38-201ENST00000344280 MED24O75448 989 aa23.75■■□□□ 1.39
CCDC38-201ENST00000344280 PLA2G4BP0C869 781 aa23.75■■□□□ 1.39
CCDC38-201ENST00000344280 VAV2P52735 878 aa23.75■■□□□ 1.39
CCDC38-201ENST00000344280 JAG1P78504 1218 aa23.75■■□□□ 1.39
CCDC38-201ENST00000344280 DACT2Q5SW24 774 aa23.75■■□□□ 1.39
CCDC38-201ENST00000344280 RRAGAQ7L523 313 aa23.75■■□□□ 1.39
CCDC38-201ENST00000344280 NELFCDQ8IXH7 590 aa23.75■■□□□ 1.39
CCDC38-201ENST00000344280 TMX4Q9H1E5 349 aaPredicted RBP23.75■■□□□ 1.39
CCDC38-201ENST00000344280 NYAP2Q9P242 653 aa23.75■■□□□ 1.39
CCDC38-201ENST00000344280 KCNMA1Q12791 1236 aa23.74■■□□□ 1.39
CCDC38-201ENST00000344280 BAP1Q92560 729 aa23.74■■□□□ 1.39
CCDC38-201ENST00000344280 DHX36Q9H2U1 1008 aaKnown RBP23.74■■□□□ 1.39
CCDC38-201ENST00000344280 ABCB11O95342 1321 aa23.74■■□□□ 1.39
CCDC38-201ENST00000344280 H3BQF6 201 aa23.73■■□□□ 1.39
CCDC38-201ENST00000344280 FGFR1OPO95684 399 aaKnown RBP23.73■■□□□ 1.39
CCDC38-201ENST00000344280 EIF4A3P38919 411 aaKnown RBP23.73■■□□□ 1.39
CCDC38-201ENST00000344280 ICA1Q05084 483 aa23.73■■□□□ 1.39
CCDC38-201ENST00000344280 DCAF4Q8WV16 495 aa23.73■■□□□ 1.39
CCDC38-201ENST00000344280 TSG101Q99816 390 aa23.73■■□□□ 1.39
CCDC38-201ENST00000344280 IDI2Q9BXS1 227 aa23.73■■□□□ 1.39
CCDC38-201ENST00000344280 TANGO6Q9C0B7 1094 aa23.73■■□□□ 1.39
CCDC38-201ENST00000344280 POTEFA5A3E0 1075 aa23.73■■□□□ 1.39
CCDC38-201ENST00000344280 TRAF5O00463 557 aa23.73■■□□□ 1.39
CCDC38-201ENST00000344280 ECE2O60344 883 aa23.73■■□□□ 1.39
CCDC38-201ENST00000344280 POTEIP0CG38 1075 aa23.73■■□□□ 1.39
CCDC38-201ENST00000344280 KIF11P52732 1056 aa23.73■■□□□ 1.39
CCDC38-201ENST00000344280 USH1GQ495M9 461 aa23.73■■□□□ 1.39
CCDC38-201ENST00000344280 TATDN1Q6P1N9 297 aa23.73■■□□□ 1.39
CCDC38-201ENST00000344280 POTEGQ6S5H5 508 aa23.73■■□□□ 1.39
CCDC38-201ENST00000344280 POTEEQ6S8J3 1075 aa23.73■■□□□ 1.39
CCDC38-201ENST00000344280 GPBP1Q86WP2 473 aa23.73■■□□□ 1.39
CCDC38-201ENST00000344280 NT5C3AQ9H0P0 336 aa23.73■■□□□ 1.39
CCDC38-201ENST00000344280 L1RE1Q9UN81 338 aa23.73■■□□□ 1.39
CCDC38-201ENST00000344280 F5H6K3 240 aa23.72■■□□□ 1.39
CCDC38-201ENST00000344280 USP11P51784 963 aa23.72■■□□□ 1.39
CCDC38-201ENST00000344280 KLRC3Q07444 240 aa23.72■■□□□ 1.39
CCDC38-201ENST00000344280 KIF5AQ12840 1032 aa23.72■■□□□ 1.39
CCDC38-201ENST00000344280 STRIP1Q5VSL9 837 aa23.72■■□□□ 1.39
CCDC38-201ENST00000344280 CCDC84Q86UT8 332 aaPredicted RBP23.72■■□□□ 1.39
CCDC38-201ENST00000344280 EHBP1Q8NDI1 1231 aa23.72■■□□□ 1.39
CCDC38-201ENST00000344280 CRYGNQ8WXF5 182 aa23.72■■□□□ 1.39
CCDC38-201ENST00000344280 KDM3AQ9Y4C1 1321 aa23.72■■□□□ 1.39
CCDC38-201ENST00000344280 CAPN6Q9Y6Q1 641 aa23.72■■□□□ 1.39
CCDC38-201ENST00000344280 CYP11B2P19099 503 aa23.72■■□□□ 1.39
CCDC38-201ENST00000344280 FKBP3Q00688 224 aaKnown RBP23.72■■□□□ 1.39
CCDC38-201ENST00000344280 APBA1Q02410 837 aa23.72■■□□□ 1.39
CCDC38-201ENST00000344280 SPA17Q15506 151 aa23.72■■□□□ 1.39
CCDC38-201ENST00000344280 PRR16Q569H4 304 aa23.72■■□□□ 1.39
CCDC38-201ENST00000344280 ARSHQ5FYA8 562 aa23.72■■□□□ 1.39
CCDC38-201ENST00000344280 IFIH1Q9BYX4 1025 aaKnown RBP23.72■■□□□ 1.39
CCDC38-201ENST00000344280 MLXIPQ9HAP2 919 aa23.72■■□□□ 1.39
CCDC38-201ENST00000344280 PCDHA13Q9Y5I0 950 aa23.72■■□□□ 1.39
CCDC38-201ENST00000344280 COL4A3BPQ9Y5P4 624 aa23.72■■□□□ 1.39
CCDC38-201ENST00000344280 CYP3A7-CYP3A51PA0A087WV96 503 aa23.71■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms